co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G11150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006592: ornithine biosynthetic process	0.00E+00
2	GO:0006593: ornithine catabolic process	0.00E+00
3	GO:0070207: protein homotrimerization	0.00E+00
4	GO:0023052: signaling	0.00E+00
5	GO:1901799: negative regulation of proteasomal protein catabolic process	0.00E+00
6	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
7	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
8	GO:0006511: ubiquitin-dependent protein catabolic process	5.14E-19
9	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	1.60E-08
10	GO:0051603: proteolysis involved in cellular protein catabolic process	8.03E-08
11	GO:0009853: photorespiration	2.86E-07
12	GO:0015991: ATP hydrolysis coupled proton transport	1.08E-05
13	GO:0046686: response to cadmium ion	1.33E-05
14	GO:0010255: glucose mediated signaling pathway	2.67E-05
15	GO:0010043: response to zinc ion	9.15E-05
16	GO:0043248: proteasome assembly	1.12E-04
17	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.12E-04
18	GO:0015992: proton transport	1.15E-04
19	GO:0006099: tricarboxylic acid cycle	1.17E-04
20	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.02E-04
21	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.41E-04
22	GO:0015986: ATP synthesis coupled proton transport	2.59E-04
23	GO:2001006: regulation of cellulose biosynthetic process	2.68E-04
24	GO:0009240: isopentenyl diphosphate biosynthetic process	2.68E-04
25	GO:0009852: auxin catabolic process	2.68E-04
26	GO:0031468: nuclear envelope reassembly	2.68E-04
27	GO:0010265: SCF complex assembly	2.68E-04
28	GO:0019544: arginine catabolic process to glutamate	2.68E-04
29	GO:0015798: myo-inositol transport	2.68E-04
30	GO:0022900: electron transport chain	3.14E-04
31	GO:0009245: lipid A biosynthetic process	3.80E-04
32	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	5.89E-04
33	GO:0046939: nucleotide phosphorylation	5.89E-04
34	GO:0006212: uracil catabolic process	5.89E-04
35	GO:0043255: regulation of carbohydrate biosynthetic process	5.89E-04
36	GO:0051788: response to misfolded protein	5.89E-04
37	GO:0019388: galactose catabolic process	5.89E-04
38	GO:0019483: beta-alanine biosynthetic process	5.89E-04
39	GO:0071668: plant-type cell wall assembly	5.89E-04
40	GO:0050992: dimethylallyl diphosphate biosynthetic process	5.89E-04
41	GO:0055114: oxidation-reduction process	6.31E-04
42	GO:0009735: response to cytokinin	7.73E-04
43	GO:0006006: glucose metabolic process	7.86E-04
44	GO:0010498: proteasomal protein catabolic process	9.55E-04
45	GO:0046034: ATP metabolic process	9.55E-04
46	GO:0051646: mitochondrion localization	9.55E-04
47	GO:0030835: negative regulation of actin filament depolymerization	9.55E-04
48	GO:0045793: positive regulation of cell size	9.55E-04
49	GO:0006760: folic acid-containing compound metabolic process	9.55E-04
50	GO:0006487: protein N-linked glycosylation	1.21E-03
51	GO:0008299: isoprenoid biosynthetic process	1.33E-03
52	GO:0006166: purine ribonucleoside salvage	1.36E-03
53	GO:0009647: skotomorphogenesis	1.36E-03
54	GO:0009590: detection of gravity	1.36E-03
55	GO:0006168: adenine salvage	1.36E-03
56	GO:0001676: long-chain fatty acid metabolic process	1.36E-03
57	GO:0032877: positive regulation of DNA endoreduplication	1.36E-03
58	GO:0061077: chaperone-mediated protein folding	1.46E-03
59	GO:0030433: ubiquitin-dependent ERAD pathway	1.60E-03
60	GO:0051781: positive regulation of cell division	1.83E-03
61	GO:0010363: regulation of plant-type hypersensitive response	1.83E-03
62	GO:0006221: pyrimidine nucleotide biosynthetic process	1.83E-03
63	GO:0032366: intracellular sterol transport	1.83E-03
64	GO:0044205: 'de novo' UMP biosynthetic process	1.83E-03
65	GO:0044209: AMP salvage	2.33E-03
66	GO:0009697: salicylic acid biosynthetic process	2.33E-03
67	GO:0006561: proline biosynthetic process	2.88E-03
68	GO:0010193: response to ozone	2.94E-03
69	GO:0030163: protein catabolic process	3.35E-03
70	GO:0048528: post-embryonic root development	4.08E-03
71	GO:0006744: ubiquinone biosynthetic process	4.08E-03
72	GO:0051693: actin filament capping	4.08E-03
73	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	4.08E-03
74	GO:0010044: response to aluminum ion	4.08E-03
75	GO:0032880: regulation of protein localization	4.08E-03
76	GO:0005978: glycogen biosynthetic process	4.73E-03
77	GO:0009690: cytokinin metabolic process	4.73E-03
78	GO:0006506: GPI anchor biosynthetic process	4.73E-03
79	GO:0000028: ribosomal small subunit assembly	4.73E-03
80	GO:0048658: anther wall tapetum development	4.73E-03
81	GO:0031540: regulation of anthocyanin biosynthetic process	4.73E-03
82	GO:0006526: arginine biosynthetic process	5.42E-03
83	GO:0043562: cellular response to nitrogen levels	5.42E-03
84	GO:0009808: lignin metabolic process	5.42E-03
85	GO:0009651: response to salt stress	5.74E-03
86	GO:0098656: anion transmembrane transport	6.14E-03
87	GO:0009821: alkaloid biosynthetic process	6.14E-03
88	GO:0080144: amino acid homeostasis	6.14E-03
89	GO:0006754: ATP biosynthetic process	6.14E-03
90	GO:0000103: sulfate assimilation	7.68E-03
91	GO:0043069: negative regulation of programmed cell death	7.68E-03
92	GO:0006631: fatty acid metabolic process	8.35E-03
93	GO:0048229: gametophyte development	8.50E-03
94	GO:0006820: anion transport	9.35E-03
95	GO:0071365: cellular response to auxin stimulus	9.35E-03
96	GO:0009636: response to toxic substance	1.02E-02
97	GO:0006807: nitrogen compound metabolic process	1.02E-02
98	GO:0006108: malate metabolic process	1.02E-02
99	GO:0042254: ribosome biogenesis	1.07E-02
100	GO:0007030: Golgi organization	1.21E-02
101	GO:0009901: anther dehiscence	1.21E-02
102	GO:0009116: nucleoside metabolic process	1.40E-02
103	GO:0051017: actin filament bundle assembly	1.40E-02
104	GO:0006406: mRNA export from nucleus	1.40E-02
105	GO:2000377: regulation of reactive oxygen species metabolic process	1.40E-02
106	GO:0016192: vesicle-mediated transport	1.46E-02
107	GO:0006412: translation	1.59E-02
108	GO:0048511: rhythmic process	1.61E-02
109	GO:0010431: seed maturation	1.61E-02
110	GO:0019748: secondary metabolic process	1.71E-02
111	GO:0016226: iron-sulfur cluster assembly	1.71E-02
112	GO:0035428: hexose transmembrane transport	1.71E-02
113	GO:0006012: galactose metabolic process	1.82E-02
114	GO:0010118: stomatal movement	2.17E-02
115	GO:0080022: primary root development	2.17E-02
116	GO:0034220: ion transmembrane transport	2.17E-02
117	GO:0000413: protein peptidyl-prolyl isomerization	2.17E-02
118	GO:0010051: xylem and phloem pattern formation	2.17E-02
119	GO:0006662: glycerol ether metabolic process	2.29E-02
120	GO:0046323: glucose import	2.29E-02
121	GO:0061025: membrane fusion	2.41E-02
122	GO:0005975: carbohydrate metabolic process	2.47E-02
123	GO:0042744: hydrogen peroxide catabolic process	2.49E-02
124	GO:0048825: cotyledon development	2.53E-02
125	GO:0019252: starch biosynthetic process	2.53E-02
126	GO:0080156: mitochondrial mRNA modification	2.65E-02
127	GO:0000302: response to reactive oxygen species	2.65E-02
128	GO:0006633: fatty acid biosynthetic process	2.75E-02
129	GO:0009630: gravitropism	2.78E-02
130	GO:0010252: auxin homeostasis	3.04E-02
131	GO:0006914: autophagy	3.04E-02
132	GO:0010228: vegetative to reproductive phase transition of meristem	3.16E-02
133	GO:0000910: cytokinesis	3.31E-02
134	GO:0009615: response to virus	3.45E-02
135	GO:0009816: defense response to bacterium, incompatible interaction	3.59E-02
136	GO:0009617: response to bacterium	3.60E-02
137	GO:0015995: chlorophyll biosynthetic process	3.88E-02
138	GO:0009817: defense response to fungus, incompatible interaction	4.17E-02
139	GO:0009733: response to auxin	4.41E-02
140	GO:0006499: N-terminal protein myristoylation	4.47E-02
141	GO:0009407: toxin catabolic process	4.47E-02
142	GO:0009826: unidimensional cell growth	4.49E-02
143	GO:0009555: pollen development	4.57E-02
144	GO:0009631: cold acclimation	4.62E-02
145	GO:0006865: amino acid transport	4.77E-02
146	GO:0000724: double-strand break repair via homologous recombination	4.77E-02
147	GO:0045087: innate immune response	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
2	GO:0003837: beta-ureidopropionase activity	0.00E+00
3	GO:0004151: dihydroorotase activity	0.00E+00
4	GO:0033961: cis-stilbene-oxide hydrolase activity	0.00E+00
5	GO:0008777: acetylornithine deacetylase activity	0.00E+00
6	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
7	GO:0004298: threonine-type endopeptidase activity	4.64E-32
8	GO:0008233: peptidase activity	1.36E-18
9	GO:0008137: NADH dehydrogenase (ubiquinone) activity	3.15E-10
10	GO:0008121: ubiquinol-cytochrome-c reductase activity	3.90E-06
11	GO:0052692: raffinose alpha-galactosidase activity	1.18E-05
12	GO:0004557: alpha-galactosidase activity	1.18E-05
13	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.27E-05
14	GO:0004129: cytochrome-c oxidase activity	2.71E-05
15	GO:0004089: carbonate dehydratase activity	4.22E-05
16	GO:0004576: oligosaccharyl transferase activity	4.83E-05
17	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	7.68E-05
18	GO:0050897: cobalt ion binding	9.15E-05
19	GO:0031177: phosphopantetheine binding	1.12E-04
20	GO:0036402: proteasome-activating ATPase activity	1.12E-04
21	GO:0005507: copper ion binding	1.18E-04
22	GO:0000035: acyl binding	1.53E-04
23	GO:0003735: structural constituent of ribosome	1.58E-04
24	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.21E-04
25	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.55E-04
26	GO:0070401: NADP+ binding	2.68E-04
27	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.68E-04
28	GO:0004452: isopentenyl-diphosphate delta-isomerase activity	2.68E-04
29	GO:0019786: Atg8-specific protease activity	2.68E-04
30	GO:0016229: steroid dehydrogenase activity	2.68E-04
31	GO:0045153: electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity	2.68E-04
32	GO:0004047: aminomethyltransferase activity	5.89E-04
33	GO:0050347: trans-octaprenyltranstransferase activity	5.89E-04
34	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	5.89E-04
35	GO:0019779: Atg8 activating enzyme activity	5.89E-04
36	GO:0004614: phosphoglucomutase activity	5.89E-04
37	GO:0005366: myo-inositol:proton symporter activity	5.89E-04
38	GO:0008517: folic acid transporter activity	5.89E-04
39	GO:0046961: proton-transporting ATPase activity, rotational mechanism	6.07E-04
40	GO:0017025: TBP-class protein binding	9.87E-04
41	GO:0005528: FK506 binding	1.21E-03
42	GO:0046872: metal ion binding	1.32E-03
43	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.36E-03
44	GO:0019201: nucleotide kinase activity	1.36E-03
45	GO:0003999: adenine phosphoribosyltransferase activity	1.36E-03
46	GO:0010011: auxin binding	1.83E-03
47	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	1.83E-03
48	GO:0050302: indole-3-acetaldehyde oxidase activity	1.83E-03
49	GO:0019776: Atg8 ligase activity	1.83E-03
50	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.83E-03
51	GO:0004301: epoxide hydrolase activity	1.83E-03
52	GO:0004659: prenyltransferase activity	1.83E-03
53	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.45E-03
54	GO:0051117: ATPase binding	2.88E-03
55	GO:0016615: malate dehydrogenase activity	2.88E-03
56	GO:0102391: decanoate--CoA ligase activity	3.46E-03
57	GO:0004017: adenylate kinase activity	3.46E-03
58	GO:0030060: L-malate dehydrogenase activity	3.46E-03
59	GO:0008143: poly(A) binding	4.08E-03
60	GO:0008320: protein transmembrane transporter activity	4.08E-03
61	GO:0004467: long-chain fatty acid-CoA ligase activity	4.08E-03
62	GO:0051213: dioxygenase activity	4.25E-03
63	GO:0015288: porin activity	4.73E-03
64	GO:0004034: aldose 1-epimerase activity	4.73E-03
65	GO:0004033: aldo-keto reductase (NADP) activity	4.73E-03
66	GO:0004869: cysteine-type endopeptidase inhibitor activity	4.73E-03
67	GO:0008308: voltage-gated anion channel activity	5.42E-03
68	GO:0015078: hydrogen ion transmembrane transporter activity	5.42E-03
69	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	6.14E-03
70	GO:0016844: strictosidine synthase activity	6.90E-03
71	GO:0051539: 4 iron, 4 sulfur cluster binding	8.01E-03
72	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	8.11E-03
73	GO:0004161: dimethylallyltranstransferase activity	8.50E-03
74	GO:0008794: arsenate reductase (glutaredoxin) activity	8.50E-03
75	GO:0008559: xenobiotic-transporting ATPase activity	8.50E-03
76	GO:0004364: glutathione transferase activity	8.70E-03
77	GO:0051537: 2 iron, 2 sulfur cluster binding	9.81E-03
78	GO:0043621: protein self-association	9.81E-03
79	GO:0031072: heat shock protein binding	1.02E-02
80	GO:0004175: endopeptidase activity	1.11E-02
81	GO:0008266: poly(U) RNA binding	1.11E-02
82	GO:0043130: ubiquitin binding	1.40E-02
83	GO:0004540: ribonuclease activity	1.61E-02
84	GO:0015035: protein disulfide oxidoreductase activity	1.80E-02
85	GO:0047134: protein-disulfide reductase activity	2.05E-02
86	GO:0019843: rRNA binding	2.19E-02
87	GO:0004791: thioredoxin-disulfide reductase activity	2.41E-02
88	GO:0005355: glucose transmembrane transporter activity	2.41E-02
89	GO:0009055: electron carrier activity	2.45E-02
90	GO:0004872: receptor activity	2.53E-02
91	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.91E-02
92	GO:0051015: actin filament binding	2.91E-02
93	GO:0008237: metallopeptidase activity	3.18E-02
94	GO:0015250: water channel activity	3.45E-02
95	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.73E-02
96	GO:0042802: identical protein binding	3.83E-02
97	GO:0016887: ATPase activity	3.87E-02
98	GO:0004683: calmodulin-dependent protein kinase activity	3.88E-02
99	GO:0004601: peroxidase activity	4.66E-02
100	GO:0003746: translation elongation factor activity	4.93E-02
101	GO:0003697: single-stranded DNA binding	4.93E-02
102	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0000221: vacuolar proton-transporting V-type ATPase, V1 domain	0.00E+00
2	GO:0000502: proteasome complex	1.59E-38
3	GO:0005839: proteasome core complex	4.64E-32
4	GO:0005747: mitochondrial respiratory chain complex I	1.98E-18
5	GO:0019773: proteasome core complex, alpha-subunit complex	3.39E-17
6	GO:0005774: vacuolar membrane	3.56E-16
7	GO:0005829: cytosol	4.07E-15
8	GO:0005773: vacuole	3.37E-13
9	GO:0022626: cytosolic ribosome	2.54E-10
10	GO:0045271: respiratory chain complex I	1.01E-09
11	GO:0005739: mitochondrion	4.62E-09
12	GO:0005753: mitochondrial proton-transporting ATP synthase complex	2.70E-08
13	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	3.14E-07
14	GO:0016020: membrane	3.38E-07
15	GO:0005750: mitochondrial respiratory chain complex III	1.28E-06
16	GO:0031966: mitochondrial membrane	1.30E-06
17	GO:0005758: mitochondrial intermembrane space	2.75E-06
18	GO:0045273: respiratory chain complex II	5.93E-06
19	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	5.93E-06
20	GO:0005759: mitochondrial matrix	1.72E-05
21	GO:0033180: proton-transporting V-type ATPase, V1 domain	2.67E-05
22	GO:0008541: proteasome regulatory particle, lid subcomplex	2.71E-05
23	GO:0005783: endoplasmic reticulum	3.52E-05
24	GO:0005746: mitochondrial respiratory chain	7.68E-05
25	GO:0008250: oligosaccharyltransferase complex	7.68E-05
26	GO:0000325: plant-type vacuole	9.15E-05
27	GO:0070469: respiratory chain	9.96E-05
28	GO:0009536: plastid	1.36E-04
29	GO:0031597: cytosolic proteasome complex	1.53E-04
30	GO:0031595: nuclear proteasome complex	2.02E-04
31	GO:0019774: proteasome core complex, beta-subunit complex	2.68E-04
32	GO:0005840: ribosome	3.50E-04
33	GO:0009507: chloroplast	4.36E-04
34	GO:0008540: proteasome regulatory particle, base subcomplex	4.50E-04
35	GO:0005788: endoplasmic reticulum lumen	5.44E-04
36	GO:0005737: cytoplasm	6.60E-04
37	GO:0046861: glyoxysomal membrane	9.55E-04
38	GO:0005838: proteasome regulatory particle	9.55E-04
39	GO:0005853: eukaryotic translation elongation factor 1 complex	9.55E-04
40	GO:0005886: plasma membrane	9.72E-04
41	GO:0005775: vacuolar lumen	1.36E-03
42	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.83E-03
43	GO:0005776: autophagosome	1.83E-03
44	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	2.88E-03
45	GO:0022625: cytosolic large ribosomal subunit	3.28E-03
46	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	4.08E-03
47	GO:0000421: autophagosome membrane	4.73E-03
48	GO:0046930: pore complex	5.42E-03
49	GO:0009514: glyoxysome	5.42E-03
50	GO:0005763: mitochondrial small ribosomal subunit	6.14E-03
51	GO:0048046: apoplast	6.92E-03
52	GO:0005740: mitochondrial envelope	7.68E-03
53	GO:0015935: small ribosomal subunit	1.61E-02
54	GO:0005741: mitochondrial outer membrane	1.61E-02
55	GO:0005777: peroxisome	1.62E-02
56	GO:0031410: cytoplasmic vesicle	1.71E-02
57	GO:0005789: endoplasmic reticulum membrane	2.50E-02
58	GO:0005730: nucleolus	2.96E-02
59	GO:0032580: Golgi cisterna membrane	3.04E-02
60	GO:0010319: stromule	3.18E-02
61	GO:0005794: Golgi apparatus	3.23E-02
62	GO:0022627: cytosolic small ribosomal subunit	3.99E-02
63	GO:0015934: large ribosomal subunit	4.62E-02