co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G11010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018293: protein-FAD linkage	0.00E+00
2	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
3	GO:0015822: ornithine transport	0.00E+00
4	GO:0006721: terpenoid metabolic process	0.00E+00
5	GO:0042908: xenobiotic transport	0.00E+00
6	GO:0009853: photorespiration	5.93E-08
7	GO:0006099: tricarboxylic acid cycle	2.18E-06
8	GO:0006108: malate metabolic process	1.90E-05
9	GO:0006006: glucose metabolic process	1.90E-05
10	GO:0015992: proton transport	5.45E-05
11	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	8.84E-05
12	GO:0080022: primary root development	1.04E-04
13	GO:0015986: ATP synthesis coupled proton transport	1.29E-04
14	GO:0022900: electron transport chain	1.88E-04
15	GO:0016487: farnesol metabolic process	1.88E-04
16	GO:0006007: glucose catabolic process	1.88E-04
17	GO:0031468: nuclear envelope reassembly	1.88E-04
18	GO:0009852: auxin catabolic process	1.88E-04
19	GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport	1.88E-04
20	GO:0006526: arginine biosynthetic process	1.88E-04
21	GO:0000066: mitochondrial ornithine transport	1.88E-04
22	GO:0009245: lipid A biosynthetic process	2.29E-04
23	GO:0044419: interspecies interaction between organisms	4.24E-04
24	GO:0016560: protein import into peroxisome matrix, docking	4.24E-04
25	GO:0019388: galactose catabolic process	4.24E-04
26	GO:0006432: phenylalanyl-tRNA aminoacylation	4.24E-04
27	GO:0019441: tryptophan catabolic process to kynurenine	4.24E-04
28	GO:0006511: ubiquitin-dependent protein catabolic process	6.21E-04
29	GO:0006591: ornithine metabolic process	6.92E-04
30	GO:0071492: cellular response to UV-A	6.92E-04
31	GO:0045793: positive regulation of cell size	6.92E-04
32	GO:0006760: folic acid-containing compound metabolic process	6.92E-04
33	GO:0005975: carbohydrate metabolic process	9.05E-04
34	GO:0046686: response to cadmium ion	9.57E-04
35	GO:0006107: oxaloacetate metabolic process	9.86E-04
36	GO:0009399: nitrogen fixation	9.86E-04
37	GO:0015700: arsenite transport	9.86E-04
38	GO:0032981: mitochondrial respiratory chain complex I assembly	9.86E-04
39	GO:0009590: detection of gravity	9.86E-04
40	GO:0032877: positive regulation of DNA endoreduplication	9.86E-04
41	GO:0051603: proteolysis involved in cellular protein catabolic process	1.06E-03
42	GO:0006012: galactose metabolic process	1.07E-03
43	GO:0051781: positive regulation of cell division	1.31E-03
44	GO:0071486: cellular response to high light intensity	1.31E-03
45	GO:0009765: photosynthesis, light harvesting	1.31E-03
46	GO:0010363: regulation of plant-type hypersensitive response	1.31E-03
47	GO:0006221: pyrimidine nucleotide biosynthetic process	1.31E-03
48	GO:0006625: protein targeting to peroxisome	1.31E-03
49	GO:0032366: intracellular sterol transport	1.31E-03
50	GO:0044205: 'de novo' UMP biosynthetic process	1.31E-03
51	GO:0009165: nucleotide biosynthetic process	1.31E-03
52	GO:0006542: glutamine biosynthetic process	1.31E-03
53	GO:0042742: defense response to bacterium	1.36E-03
54	GO:0070814: hydrogen sulfide biosynthetic process	2.05E-03
55	GO:0006796: phosphate-containing compound metabolic process	2.05E-03
56	GO:0009117: nucleotide metabolic process	2.05E-03
57	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	2.05E-03
58	GO:0071446: cellular response to salicylic acid stimulus	2.90E-03
59	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.90E-03
60	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	2.90E-03
61	GO:0005978: glycogen biosynthetic process	3.36E-03
62	GO:0000028: ribosomal small subunit assembly	3.36E-03
63	GO:0048658: anther wall tapetum development	3.36E-03
64	GO:0009231: riboflavin biosynthetic process	3.36E-03
65	GO:0055114: oxidation-reduction process	3.85E-03
66	GO:0010043: response to zinc ion	3.88E-03
67	GO:0098656: anion transmembrane transport	4.35E-03
68	GO:0046685: response to arsenic-containing substance	4.35E-03
69	GO:0080144: amino acid homeostasis	4.35E-03
70	GO:0006754: ATP biosynthetic process	4.35E-03
71	GO:0009060: aerobic respiration	4.35E-03
72	GO:0009970: cellular response to sulfate starvation	5.42E-03
73	GO:0000103: sulfate assimilation	5.42E-03
74	GO:0009926: auxin polar transport	5.48E-03
75	GO:0052544: defense response by callose deposition in cell wall	5.99E-03
76	GO:0072593: reactive oxygen species metabolic process	5.99E-03
77	GO:0018119: peptidyl-cysteine S-nitrosylation	5.99E-03
78	GO:0048229: gametophyte development	5.99E-03
79	GO:0006820: anion transport	6.58E-03
80	GO:0006807: nitrogen compound metabolic process	7.19E-03
81	GO:0050826: response to freezing	7.19E-03
82	GO:0007031: peroxisome organization	8.47E-03
83	GO:0007030: Golgi organization	8.47E-03
84	GO:0019853: L-ascorbic acid biosynthetic process	8.47E-03
85	GO:0006096: glycolytic process	8.73E-03
86	GO:0045454: cell redox homeostasis	9.09E-03
87	GO:0006071: glycerol metabolic process	9.14E-03
88	GO:0009116: nucleoside metabolic process	9.83E-03
89	GO:0006487: protein N-linked glycosylation	9.83E-03
90	GO:0006874: cellular calcium ion homeostasis	1.05E-02
91	GO:0010431: seed maturation	1.13E-02
92	GO:0019915: lipid storage	1.13E-02
93	GO:0061077: chaperone-mediated protein folding	1.13E-02
94	GO:0016226: iron-sulfur cluster assembly	1.20E-02
95	GO:0080092: regulation of pollen tube growth	1.20E-02
96	GO:0010118: stomatal movement	1.51E-02
97	GO:0015991: ATP hydrolysis coupled proton transport	1.51E-02
98	GO:0042391: regulation of membrane potential	1.51E-02
99	GO:0034220: ion transmembrane transport	1.51E-02
100	GO:0000413: protein peptidyl-prolyl isomerization	1.51E-02
101	GO:0006520: cellular amino acid metabolic process	1.60E-02
102	GO:0006662: glycerol ether metabolic process	1.60E-02
103	GO:0006633: fatty acid biosynthetic process	1.66E-02
104	GO:0061025: membrane fusion	1.68E-02
105	GO:0019252: starch biosynthetic process	1.77E-02
106	GO:0016132: brassinosteroid biosynthetic process	1.85E-02
107	GO:1901657: glycosyl compound metabolic process	2.03E-02
108	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.04E-02
109	GO:0010252: auxin homeostasis	2.13E-02
110	GO:0009617: response to bacterium	2.18E-02
111	GO:0009735: response to cytokinin	2.19E-02
112	GO:0000910: cytokinesis	2.31E-02
113	GO:0016126: sterol biosynthetic process	2.41E-02
114	GO:0009555: pollen development	2.45E-02
115	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.51E-02
116	GO:0010029: regulation of seed germination	2.51E-02
117	GO:0009627: systemic acquired resistance	2.61E-02
118	GO:0042128: nitrate assimilation	2.61E-02
119	GO:0006974: cellular response to DNA damage stimulus	2.61E-02
120	GO:0009826: unidimensional cell growth	2.72E-02
121	GO:0042254: ribosome biogenesis	2.88E-02
122	GO:0009407: toxin catabolic process	3.12E-02
123	GO:0009631: cold acclimation	3.23E-02
124	GO:0045087: innate immune response	3.45E-02
125	GO:0034599: cellular response to oxidative stress	3.56E-02
126	GO:0006839: mitochondrial transport	3.78E-02
127	GO:0009636: response to toxic substance	4.48E-02
128	GO:0006855: drug transmembrane transport	4.60E-02
129	GO:0016042: lipid catabolic process	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
2	GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	0.00E+00
3	GO:0004585: ornithine carbamoyltransferase activity	0.00E+00
4	GO:0050152: omega-amidase activity	0.00E+00
5	GO:0003992: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity	0.00E+00
6	GO:0004746: riboflavin synthase activity	0.00E+00
7	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
8	GO:0004151: dihydroorotase activity	0.00E+00
9	GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity	0.00E+00
10	GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity	0.00E+00
11	GO:0047886: farnesol dehydrogenase activity	0.00E+00
12	GO:0004056: argininosuccinate lyase activity	0.00E+00
13	GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
14	GO:0004298: threonine-type endopeptidase activity	2.80E-10
15	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	4.43E-06
16	GO:0005507: copper ion binding	2.42E-05
17	GO:0050897: cobalt ion binding	3.57E-05
18	GO:0031177: phosphopantetheine binding	6.36E-05
19	GO:0030060: L-malate dehydrogenase activity	8.84E-05
20	GO:0000035: acyl binding	8.84E-05
21	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.51E-04
22	GO:0004034: aldose 1-epimerase activity	1.51E-04
23	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.58E-04
24	GO:0046480: galactolipid galactosyltransferase activity	1.88E-04
25	GO:0080079: cellobiose glucosidase activity	1.88E-04
26	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	1.88E-04
27	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	1.88E-04
28	GO:0080047: GDP-L-galactose phosphorylase activity	1.88E-04
29	GO:0071992: phytochelatin transmembrane transporter activity	1.88E-04
30	GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	1.88E-04
31	GO:0000248: C-5 sterol desaturase activity	1.88E-04
32	GO:0080048: GDP-D-glucose phosphorylase activity	1.88E-04
33	GO:0008233: peptidase activity	2.51E-04
34	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	4.24E-04
35	GO:0000064: L-ornithine transmembrane transporter activity	4.24E-04
36	GO:0004826: phenylalanine-tRNA ligase activity	4.24E-04
37	GO:0016743: carboxyl- or carbamoyltransferase activity	4.24E-04
38	GO:0004061: arylformamidase activity	4.24E-04
39	GO:0004614: phosphoglucomutase activity	4.24E-04
40	GO:0070180: large ribosomal subunit rRNA binding	6.92E-04
41	GO:0004557: alpha-galactosidase activity	6.92E-04
42	GO:0004781: sulfate adenylyltransferase (ATP) activity	6.92E-04
43	GO:0052692: raffinose alpha-galactosidase activity	6.92E-04
44	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	9.86E-04
45	GO:0004749: ribose phosphate diphosphokinase activity	9.86E-04
46	GO:0035529: NADH pyrophosphatase activity	9.86E-04
47	GO:0010011: auxin binding	1.31E-03
48	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	1.31E-03
49	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.31E-03
50	GO:0050302: indole-3-acetaldehyde oxidase activity	1.31E-03
51	GO:0004576: oligosaccharyl transferase activity	1.31E-03
52	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.31E-03
53	GO:0003735: structural constituent of ribosome	1.63E-03
54	GO:0015035: protein disulfide oxidoreductase activity	1.64E-03
55	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.66E-03
56	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.66E-03
57	GO:0004356: glutamate-ammonia ligase activity	1.66E-03
58	GO:0080046: quercetin 4'-O-glucosyltransferase activity	2.05E-03
59	GO:0051117: ATPase binding	2.05E-03
60	GO:0016615: malate dehydrogenase activity	2.05E-03
61	GO:0005261: cation channel activity	2.46E-03
62	GO:0004427: inorganic diphosphatase activity	2.90E-03
63	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.90E-03
64	GO:0008143: poly(A) binding	2.90E-03
65	GO:0005085: guanyl-nucleotide exchange factor activity	2.90E-03
66	GO:0015288: porin activity	3.36E-03
67	GO:0008308: voltage-gated anion channel activity	3.84E-03
68	GO:0008889: glycerophosphodiester phosphodiesterase activity	4.35E-03
69	GO:0008047: enzyme activator activity	5.42E-03
70	GO:0051537: 2 iron, 2 sulfur cluster binding	5.93E-03
71	GO:0004129: cytochrome-c oxidase activity	5.99E-03
72	GO:0008794: arsenate reductase (glutaredoxin) activity	5.99E-03
73	GO:0005089: Rho guanyl-nucleotide exchange factor activity	5.99E-03
74	GO:0008559: xenobiotic-transporting ATPase activity	5.99E-03
75	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.39E-03
76	GO:0008378: galactosyltransferase activity	6.58E-03
77	GO:0000049: tRNA binding	6.58E-03
78	GO:0004089: carbonate dehydratase activity	7.19E-03
79	GO:0004175: endopeptidase activity	7.82E-03
80	GO:0008266: poly(U) RNA binding	7.82E-03
81	GO:0030552: cAMP binding	8.47E-03
82	GO:0030553: cGMP binding	8.47E-03
83	GO:0005217: intracellular ligand-gated ion channel activity	8.47E-03
84	GO:0004970: ionotropic glutamate receptor activity	8.47E-03
85	GO:0043130: ubiquitin binding	9.83E-03
86	GO:0005528: FK506 binding	9.83E-03
87	GO:0005216: ion channel activity	1.05E-02
88	GO:0004540: ribonuclease activity	1.13E-02
89	GO:0005102: receptor binding	1.43E-02
90	GO:0047134: protein-disulfide reductase activity	1.43E-02
91	GO:0030551: cyclic nucleotide binding	1.51E-02
92	GO:0005249: voltage-gated potassium channel activity	1.51E-02
93	GO:0004791: thioredoxin-disulfide reductase activity	1.68E-02
94	GO:0016853: isomerase activity	1.68E-02
95	GO:0050662: coenzyme binding	1.68E-02
96	GO:0004872: receptor activity	1.77E-02
97	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.03E-02
98	GO:0016597: amino acid binding	2.31E-02
99	GO:0015250: water channel activity	2.41E-02
100	GO:0051213: dioxygenase activity	2.41E-02
101	GO:0016168: chlorophyll binding	2.51E-02
102	GO:0008375: acetylglucosaminyltransferase activity	2.61E-02
103	GO:0000287: magnesium ion binding	2.77E-02
104	GO:0008236: serine-type peptidase activity	2.81E-02
105	GO:0016788: hydrolase activity, acting on ester bonds	2.88E-02
106	GO:0030145: manganese ion binding	3.23E-02
107	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.45E-02
108	GO:0030246: carbohydrate binding	3.54E-02
109	GO:0008422: beta-glucosidase activity	3.67E-02
110	GO:0050661: NADP binding	3.78E-02
111	GO:0052689: carboxylic ester hydrolase activity	3.87E-02
112	GO:0004364: glutathione transferase activity	4.01E-02
113	GO:0004185: serine-type carboxypeptidase activity	4.13E-02
114	GO:0043621: protein self-association	4.36E-02
115	GO:0051287: NAD binding	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0016469: proton-transporting two-sector ATPase complex	0.00E+00
2	GO:0005747: mitochondrial respiratory chain complex I	3.56E-18
3	GO:0045271: respiratory chain complex I	2.00E-10
4	GO:0005839: proteasome core complex	2.80E-10
5	GO:0005829: cytosol	5.91E-10
6	GO:0005753: mitochondrial proton-transporting ATP synthase complex	6.81E-09
7	GO:0005773: vacuole	7.80E-09
8	GO:0005739: mitochondrion	1.12E-08
9	GO:0000502: proteasome complex	1.16E-08
10	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.26E-07
11	GO:0031966: mitochondrial membrane	2.79E-07
12	GO:0019773: proteasome core complex, alpha-subunit complex	3.63E-06
13	GO:0005759: mitochondrial matrix	5.52E-05
14	GO:0045273: respiratory chain complex II	1.51E-04
15	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	1.51E-04
16	GO:0005774: vacuolar membrane	1.81E-04
17	GO:1990429: peroxisomal importomer complex	1.88E-04
18	GO:0009507: chloroplast	2.94E-04
19	GO:0022626: cytosolic ribosome	3.01E-04
20	GO:0009536: plastid	5.66E-04
21	GO:0070469: respiratory chain	8.29E-04
22	GO:0016471: vacuolar proton-transporting V-type ATPase complex	1.31E-03
23	GO:0005840: ribosome	1.49E-03
24	GO:0005746: mitochondrial respiratory chain	1.66E-03
25	GO:0008250: oligosaccharyltransferase complex	1.66E-03
26	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	2.05E-03
27	GO:0048046: apoplast	2.07E-03
28	GO:0005788: endoplasmic reticulum lumen	2.73E-03
29	GO:0031359: integral component of chloroplast outer membrane	2.90E-03
30	GO:0009570: chloroplast stroma	3.16E-03
31	GO:0046930: pore complex	3.84E-03
32	GO:0000325: plant-type vacuole	3.88E-03
33	GO:0005763: mitochondrial small ribosomal subunit	4.35E-03
34	GO:0022625: cytosolic large ribosomal subunit	7.71E-03
35	GO:0005750: mitochondrial respiratory chain complex III	7.82E-03
36	GO:0005764: lysosome	7.82E-03
37	GO:0005758: mitochondrial intermembrane space	9.83E-03
38	GO:0005741: mitochondrial outer membrane	1.13E-02
39	GO:0016020: membrane	1.21E-02
40	GO:0005730: nucleolus	1.25E-02
41	GO:0009523: photosystem II	1.77E-02
42	GO:0005618: cell wall	2.01E-02
43	GO:0010319: stromule	2.22E-02
44	GO:0005778: peroxisomal membrane	2.22E-02
45	GO:0005783: endoplasmic reticulum	2.40E-02
46	GO:0009707: chloroplast outer membrane	2.91E-02