Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G10360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048870: cell motility0.00E+00
2GO:0032211: negative regulation of telomere maintenance via telomerase0.00E+00
3GO:0046292: formaldehyde metabolic process0.00E+00
4GO:0023052: signaling0.00E+00
5GO:0006069: ethanol oxidation0.00E+00
6GO:0006721: terpenoid metabolic process0.00E+00
7GO:0009236: cobalamin biosynthetic process0.00E+00
8GO:0001881: receptor recycling0.00E+00
9GO:0006120: mitochondrial electron transport, NADH to ubiquinone4.94E-08
10GO:0009853: photorespiration1.29E-06
11GO:0008333: endosome to lysosome transport2.19E-05
12GO:0010387: COP9 signalosome assembly8.50E-05
13GO:0019509: L-methionine salvage from methylthioadenosine2.57E-04
14GO:0006099: tricarboxylic acid cycle2.71E-04
15GO:0000338: protein deneddylation3.33E-04
16GO:2001006: regulation of cellulose biosynthetic process3.73E-04
17GO:0019354: siroheme biosynthetic process3.73E-04
18GO:0016487: farnesol metabolic process3.73E-04
19GO:0009240: isopentenyl diphosphate biosynthetic process3.73E-04
20GO:0044376: RNA polymerase II complex import to nucleus3.73E-04
21GO:1990022: RNA polymerase III complex localization to nucleus3.73E-04
22GO:0031539: positive regulation of anthocyanin metabolic process3.73E-04
23GO:0031468: nuclear envelope reassembly3.73E-04
24GO:0010265: SCF complex assembly3.73E-04
25GO:0015798: myo-inositol transport3.73E-04
26GO:0015991: ATP hydrolysis coupled proton transport4.05E-04
27GO:0010099: regulation of photomorphogenesis5.11E-04
28GO:0009585: red, far-red light phototransduction6.08E-04
29GO:0051603: proteolysis involved in cellular protein catabolic process6.41E-04
30GO:0045901: positive regulation of translational elongation8.10E-04
31GO:0046939: nucleotide phosphorylation8.10E-04
32GO:0006452: translational frameshifting8.10E-04
33GO:0043255: regulation of carbohydrate biosynthetic process8.10E-04
34GO:0007163: establishment or maintenance of cell polarity8.10E-04
35GO:0006432: phenylalanyl-tRNA aminoacylation8.10E-04
36GO:0080026: response to indolebutyric acid8.10E-04
37GO:0045905: positive regulation of translational termination8.10E-04
38GO:0071668: plant-type cell wall assembly8.10E-04
39GO:0019441: tryptophan catabolic process to kynurenine8.10E-04
40GO:0097054: L-glutamate biosynthetic process8.10E-04
41GO:0050992: dimethylallyl diphosphate biosynthetic process8.10E-04
42GO:0006006: glucose metabolic process1.25E-03
43GO:0034227: tRNA thio-modification1.31E-03
44GO:0046417: chorismate metabolic process1.31E-03
45GO:0015940: pantothenate biosynthetic process1.31E-03
46GO:0045793: positive regulation of cell size1.31E-03
47GO:0006760: folic acid-containing compound metabolic process1.31E-03
48GO:0006624: vacuolar protein processing1.89E-03
49GO:0006166: purine ribonucleoside salvage1.89E-03
50GO:0006107: oxaloacetate metabolic process1.89E-03
51GO:0006537: glutamate biosynthetic process1.89E-03
52GO:0010971: positive regulation of G2/M transition of mitotic cell cycle1.89E-03
53GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.89E-03
54GO:1901332: negative regulation of lateral root development1.89E-03
55GO:0009963: positive regulation of flavonoid biosynthetic process1.89E-03
56GO:0006168: adenine salvage1.89E-03
57GO:0080024: indolebutyric acid metabolic process1.89E-03
58GO:0006882: cellular zinc ion homeostasis1.89E-03
59GO:0032877: positive regulation of DNA endoreduplication1.89E-03
60GO:0006487: protein N-linked glycosylation1.95E-03
61GO:0009116: nucleoside metabolic process1.95E-03
62GO:0045454: cell redox homeostasis2.13E-03
63GO:0015992: proton transport2.37E-03
64GO:0009640: photomorphogenesis2.43E-03
65GO:0019676: ammonia assimilation cycle2.54E-03
66GO:0051781: positive regulation of cell division2.54E-03
67GO:0032366: intracellular sterol transport2.54E-03
68GO:0000003: reproduction2.54E-03
69GO:0016226: iron-sulfur cluster assembly2.59E-03
70GO:0055114: oxidation-reduction process2.75E-03
71GO:0044209: AMP salvage3.25E-03
72GO:0018344: protein geranylgeranylation3.25E-03
73GO:0009697: salicylic acid biosynthetic process3.25E-03
74GO:0030041: actin filament polymerization3.25E-03
75GO:0060776: simple leaf morphogenesis3.25E-03
76GO:0042147: retrograde transport, endosome to Golgi3.33E-03
77GO:0006662: glycerol ether metabolic process3.88E-03
78GO:0006555: methionine metabolic process4.02E-03
79GO:0009117: nucleotide metabolic process4.02E-03
80GO:0002238: response to molecule of fungal origin4.02E-03
81GO:0015986: ATP synthesis coupled proton transport4.18E-03
82GO:0009826: unidimensional cell growth4.38E-03
83GO:0006511: ubiquitin-dependent protein catabolic process4.50E-03
84GO:1901001: negative regulation of response to salt stress4.85E-03
85GO:0010090: trichome morphogenesis5.46E-03
86GO:0032880: regulation of protein localization5.73E-03
87GO:0022904: respiratory electron transport chain5.73E-03
88GO:0006914: autophagy5.81E-03
89GO:0010286: heat acclimation6.18E-03
90GO:0010928: regulation of auxin mediated signaling pathway6.65E-03
91GO:0009787: regulation of abscisic acid-activated signaling pathway6.65E-03
92GO:0009690: cytokinin metabolic process6.65E-03
93GO:0006506: GPI anchor biosynthetic process6.65E-03
94GO:0000028: ribosomal small subunit assembly6.65E-03
95GO:0045010: actin nucleation6.65E-03
96GO:0048658: anther wall tapetum development6.65E-03
97GO:0009808: lignin metabolic process7.64E-03
98GO:0010093: specification of floral organ identity7.64E-03
99GO:0015996: chlorophyll catabolic process7.64E-03
100GO:0010100: negative regulation of photomorphogenesis7.64E-03
101GO:0006950: response to stress8.18E-03
102GO:0046686: response to cadmium ion8.53E-03
103GO:0000902: cell morphogenesis8.66E-03
104GO:0046685: response to arsenic-containing substance8.66E-03
105GO:0009821: alkaloid biosynthetic process8.66E-03
106GO:0009245: lipid A biosynthetic process8.66E-03
107GO:0080144: amino acid homeostasis8.66E-03
108GO:0006754: ATP biosynthetic process8.66E-03
109GO:0048589: developmental growth8.66E-03
110GO:0071577: zinc II ion transmembrane transport9.74E-03
111GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process9.74E-03
112GO:0000103: sulfate assimilation1.09E-02
113GO:0043069: negative regulation of programmed cell death1.09E-02
114GO:0010150: leaf senescence1.12E-02
115GO:0006378: mRNA polyadenylation1.20E-02
116GO:0072593: reactive oxygen species metabolic process1.20E-02
117GO:0009073: aromatic amino acid family biosynthetic process1.20E-02
118GO:0052544: defense response by callose deposition in cell wall1.20E-02
119GO:0034599: cellular response to oxidative stress1.21E-02
120GO:0009753: response to jasmonic acid1.30E-02
121GO:0030001: metal ion transport1.32E-02
122GO:0016925: protein sumoylation1.33E-02
123GO:0006631: fatty acid metabolic process1.37E-02
124GO:0006829: zinc II ion transport1.45E-02
125GO:0006108: malate metabolic process1.45E-02
126GO:0006807: nitrogen compound metabolic process1.45E-02
127GO:0009691: cytokinin biosynthetic process1.45E-02
128GO:0007034: vacuolar transport1.58E-02
129GO:0019853: L-ascorbic acid biosynthetic process1.71E-02
130GO:0007030: Golgi organization1.71E-02
131GO:0010039: response to iron ion1.71E-02
132GO:0006855: drug transmembrane transport1.74E-02
133GO:0006071: glycerol metabolic process1.85E-02
134GO:0042753: positive regulation of circadian rhythm1.85E-02
135GO:0034976: response to endoplasmic reticulum stress1.85E-02
136GO:2000377: regulation of reactive oxygen species metabolic process1.99E-02
137GO:0010224: response to UV-B2.08E-02
138GO:0051302: regulation of cell division2.14E-02
139GO:0019953: sexual reproduction2.14E-02
140GO:0008299: isoprenoid biosynthetic process2.14E-02
141GO:0006970: response to osmotic stress2.14E-02
142GO:0010431: seed maturation2.29E-02
143GO:0061077: chaperone-mediated protein folding2.29E-02
144GO:0019748: secondary metabolic process2.44E-02
145GO:0010017: red or far-red light signaling pathway2.44E-02
146GO:0035428: hexose transmembrane transport2.44E-02
147GO:0006012: galactose metabolic process2.60E-02
148GO:0001944: vasculature development2.60E-02
149GO:0016569: covalent chromatin modification2.70E-02
150GO:0016192: vesicle-mediated transport2.73E-02
151GO:0010089: xylem development2.76E-02
152GO:0019722: calcium-mediated signaling2.76E-02
153GO:0035556: intracellular signal transduction2.97E-02
154GO:0051726: regulation of cell cycle3.04E-02
155GO:0010118: stomatal movement3.08E-02
156GO:0080022: primary root development3.08E-02
157GO:0034220: ion transmembrane transport3.08E-02
158GO:0000413: protein peptidyl-prolyl isomerization3.08E-02
159GO:0010051: xylem and phloem pattern formation3.08E-02
160GO:0046323: glucose import3.25E-02
161GO:0009958: positive gravitropism3.25E-02
162GO:0010305: leaf vascular tissue pattern formation3.25E-02
163GO:0000398: mRNA splicing, via spliceosome3.31E-02
164GO:0006886: intracellular protein transport3.33E-02
165GO:0061025: membrane fusion3.42E-02
166GO:0006623: protein targeting to vacuole3.60E-02
167GO:0080156: mitochondrial mRNA modification3.78E-02
168GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.78E-02
169GO:0009630: gravitropism3.96E-02
170GO:0016042: lipid catabolic process4.00E-02
171GO:0009408: response to heat4.15E-02
172GO:0009651: response to salt stress4.17E-02
173GO:0009828: plant-type cell wall loosening4.33E-02
174GO:0051607: defense response to virus4.71E-02
175GO:0000910: cytokinesis4.71E-02
176GO:0009615: response to virus4.91E-02
RankGO TermAdjusted P value
1GO:0080007: S-nitrosoglutathione reductase activity0.00E+00
2GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
3GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity0.00E+00
4GO:0015930: glutamate synthase activity0.00E+00
5GO:0050152: omega-amidase activity0.00E+00
6GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity0.00E+00
7GO:0051266: sirohydrochlorin ferrochelatase activity0.00E+00
8GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity0.00E+00
9GO:0047886: farnesol dehydrogenase activity0.00E+00
10GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity0.00E+00
11GO:0016852: sirohydrochlorin cobaltochelatase activity0.00E+00
12GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity0.00E+00
13GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
14GO:0004298: threonine-type endopeptidase activity3.40E-07
15GO:0004129: cytochrome-c oxidase activity1.50E-06
16GO:0008137: NADH dehydrogenase (ubiquinone) activity2.46E-06
17GO:0004576: oligosaccharyl transferase activity8.50E-05
18GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.32E-04
19GO:0008930: methylthioadenosine nucleosidase activity3.73E-04
20GO:0080048: GDP-D-glucose phosphorylase activity3.73E-04
21GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity3.73E-04
22GO:0080047: GDP-L-galactose phosphorylase activity3.73E-04
23GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity3.73E-04
24GO:0004452: isopentenyl-diphosphate delta-isomerase activity3.73E-04
25GO:0019707: protein-cysteine S-acyltransferase activity3.73E-04
26GO:0102293: pheophytinase b activity3.73E-04
27GO:0030611: arsenate reductase activity3.73E-04
28GO:0008782: adenosylhomocysteine nucleosidase activity3.73E-04
29GO:0016041: glutamate synthase (ferredoxin) activity3.73E-04
30GO:0046933: proton-transporting ATP synthase activity, rotational mechanism4.48E-04
31GO:0015078: hydrogen ion transmembrane transporter activity5.11E-04
32GO:0004106: chorismate mutase activity8.10E-04
33GO:0004061: arylformamidase activity8.10E-04
34GO:0004826: phenylalanine-tRNA ligase activity8.10E-04
35GO:0005366: myo-inositol:proton symporter activity8.10E-04
36GO:0008517: folic acid transporter activity8.10E-04
37GO:0047746: chlorophyllase activity8.10E-04
38GO:0008794: arsenate reductase (glutaredoxin) activity9.70E-04
39GO:0015035: protein disulfide oxidoreductase activity1.08E-03
40GO:0016788: hydrolase activity, acting on ester bonds1.10E-03
41GO:0052692: raffinose alpha-galactosidase activity1.31E-03
42GO:0008430: selenium binding1.31E-03
43GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity1.31E-03
44GO:0032403: protein complex binding1.31E-03
45GO:0004557: alpha-galactosidase activity1.31E-03
46GO:0004663: Rab geranylgeranyltransferase activity1.31E-03
47GO:0016805: dipeptidase activity1.31E-03
48GO:0008233: peptidase activity1.50E-03
49GO:0050897: cobalt ion binding1.57E-03
50GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.89E-03
51GO:0035529: NADH pyrophosphatase activity1.89E-03
52GO:0019201: nucleotide kinase activity1.89E-03
53GO:0003999: adenine phosphoribosyltransferase activity1.89E-03
54GO:0051536: iron-sulfur cluster binding1.95E-03
55GO:0051539: 4 iron, 4 sulfur cluster binding2.08E-03
56GO:0010011: auxin binding2.54E-03
57GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.54E-03
58GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances2.54E-03
59GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor2.54E-03
60GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.96E-03
61GO:0004040: amidase activity3.25E-03
62GO:0016651: oxidoreductase activity, acting on NAD(P)H3.25E-03
63GO:0005496: steroid binding3.25E-03
64GO:0031386: protein tag3.25E-03
65GO:0051538: 3 iron, 4 sulfur cluster binding3.25E-03
66GO:0047134: protein-disulfide reductase activity3.33E-03
67GO:0046873: metal ion transmembrane transporter activity3.88E-03
68GO:0080046: quercetin 4'-O-glucosyltransferase activity4.02E-03
69GO:0031177: phosphopantetheine binding4.02E-03
70GO:0051117: ATPase binding4.02E-03
71GO:0004791: thioredoxin-disulfide reductase activity4.18E-03
72GO:0004017: adenylate kinase activity4.85E-03
73GO:0000035: acyl binding4.85E-03
74GO:0070300: phosphatidic acid binding4.85E-03
75GO:0005507: copper ion binding4.93E-03
76GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor5.46E-03
77GO:0008235: metalloexopeptidase activity5.73E-03
78GO:0042162: telomeric DNA binding5.73E-03
79GO:0008143: poly(A) binding5.73E-03
80GO:0008320: protein transmembrane transporter activity5.73E-03
81GO:0005085: guanyl-nucleotide exchange factor activity5.73E-03
82GO:0035064: methylated histone binding6.65E-03
83GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process6.65E-03
84GO:0004034: aldose 1-epimerase activity6.65E-03
85GO:0043022: ribosome binding6.65E-03
86GO:0004869: cysteine-type endopeptidase inhibitor activity6.65E-03
87GO:0008889: glycerophosphodiester phosphodiesterase activity8.66E-03
88GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism8.66E-03
89GO:0016844: strictosidine synthase activity9.74E-03
90GO:0045309: protein phosphorylated amino acid binding9.74E-03
91GO:0047617: acyl-CoA hydrolase activity9.74E-03
92GO:0003746: translation elongation factor activity1.15E-02
93GO:0003697: single-stranded DNA binding1.15E-02
94GO:0019904: protein domain specific binding1.20E-02
95GO:0046961: proton-transporting ATPase activity, rotational mechanism1.20E-02
96GO:0004177: aminopeptidase activity1.20E-02
97GO:0008559: xenobiotic-transporting ATPase activity1.20E-02
98GO:0000049: tRNA binding1.33E-02
99GO:0004022: alcohol dehydrogenase (NAD) activity1.45E-02
100GO:0004089: carbonate dehydratase activity1.45E-02
101GO:0004175: endopeptidase activity1.58E-02
102GO:0051537: 2 iron, 2 sulfur cluster binding1.61E-02
103GO:0043621: protein self-association1.61E-02
104GO:0016787: hydrolase activity1.67E-02
105GO:0004725: protein tyrosine phosphatase activity1.85E-02
106GO:0005385: zinc ion transmembrane transporter activity1.99E-02
107GO:0043130: ubiquitin binding1.99E-02
108GO:0005528: FK506 binding1.99E-02
109GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.46E-02
110GO:0022857: transmembrane transporter activity2.70E-02
111GO:0003756: protein disulfide isomerase activity2.76E-02
112GO:0052689: carboxylic ester hydrolase activity2.90E-02
113GO:0016746: transferase activity, transferring acyl groups2.95E-02
114GO:0004527: exonuclease activity3.25E-02
115GO:0003824: catalytic activity3.29E-02
116GO:0016853: isomerase activity3.42E-02
117GO:0005355: glucose transmembrane transporter activity3.42E-02
118GO:0050662: coenzyme binding3.42E-02
119GO:0004872: receptor activity3.60E-02
120GO:0004197: cysteine-type endopeptidase activity3.96E-02
121GO:0005515: protein binding4.31E-02
122GO:0008237: metallopeptidase activity4.52E-02
123GO:0016597: amino acid binding4.71E-02
124GO:0015250: water channel activity4.91E-02
RankGO TermAdjusted P value
1GO:0097361: CIA complex0.00E+00
2GO:0000274: mitochondrial proton-transporting ATP synthase, stator stalk0.00E+00
3GO:0000221: vacuolar proton-transporting V-type ATPase, V1 domain0.00E+00
4GO:0016469: proton-transporting two-sector ATPase complex0.00E+00
5GO:0005747: mitochondrial respiratory chain complex I2.41E-15
6GO:0045271: respiratory chain complex I4.88E-09
7GO:0005773: vacuole1.42E-08
8GO:0045273: respiratory chain complex II1.75E-07
9GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)1.75E-07
10GO:0005829: cytosol2.05E-07
11GO:0005839: proteasome core complex3.40E-07
12GO:0005783: endoplasmic reticulum2.84E-06
13GO:0031966: mitochondrial membrane5.61E-06
14GO:0005774: vacuolar membrane1.27E-05
15GO:0000502: proteasome complex8.20E-05
16GO:0005753: mitochondrial proton-transporting ATP synthase complex1.27E-04
17GO:0008250: oligosaccharyltransferase complex1.32E-04
18GO:0030904: retromer complex1.90E-04
19GO:0005771: multivesicular body1.90E-04
20GO:0000421: autophagosome membrane4.18E-04
21GO:0019773: proteasome core complex, alpha-subunit complex5.11E-04
22GO:0008180: COP9 signalosome6.13E-04
23GO:0005697: telomerase holoenzyme complex8.10E-04
24GO:0005751: mitochondrial respiratory chain complex IV1.31E-03
25GO:0005838: proteasome regulatory particle1.31E-03
26GO:0005853: eukaryotic translation elongation factor 1 complex1.31E-03
27GO:0000325: plant-type vacuole1.57E-03
28GO:0005968: Rab-protein geranylgeranyltransferase complex1.89E-03
29GO:0005849: mRNA cleavage factor complex1.89E-03
30GO:0000323: lytic vacuole1.89E-03
31GO:1990726: Lsm1-7-Pat1 complex1.89E-03
32GO:0000276: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)1.89E-03
33GO:0005758: mitochondrial intermembrane space1.95E-03
34GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)2.54E-03
35GO:0033179: proton-transporting V-type ATPase, V0 domain2.54E-03
36GO:0016471: vacuolar proton-transporting V-type ATPase complex2.54E-03
37GO:0031410: cytoplasmic vesicle2.59E-03
38GO:0016020: membrane2.71E-03
39GO:0005746: mitochondrial respiratory chain3.25E-03
40GO:0031209: SCAR complex4.02E-03
41GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)4.02E-03
42GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane5.73E-03
43GO:0005732: small nucleolar ribonucleoprotein complex6.23E-03
44GO:0005739: mitochondrion6.27E-03
45GO:0009507: chloroplast6.52E-03
46GO:0005688: U6 snRNP6.65E-03
47GO:0005788: endoplasmic reticulum lumen7.34E-03
48GO:0046540: U4/U6 x U5 tri-snRNP complex7.64E-03
49GO:0005789: endoplasmic reticulum membrane8.18E-03
50GO:0005763: mitochondrial small ribosomal subunit8.66E-03
51GO:0031090: organelle membrane8.66E-03
52GO:0071011: precatalytic spliceosome9.74E-03
53GO:0005730: nucleolus1.02E-02
54GO:0005777: peroxisome1.07E-02
55GO:0005740: mitochondrial envelope1.09E-02
56GO:0071013: catalytic step 2 spliceosome1.20E-02
57GO:0031902: late endosome membrane1.37E-02
58GO:0009508: plastid chromosome1.45E-02
59GO:0009536: plastid1.46E-02
60GO:0070469: respiratory chain2.14E-02
61GO:0005874: microtubule2.45E-02
62GO:0005794: Golgi apparatus3.55E-02
63GO:0071944: cell periphery4.14E-02
64GO:0032580: Golgi cisterna membrane4.33E-02
65GO:0005737: cytoplasm4.40E-02
66GO:0005759: mitochondrial matrix4.49E-02
67GO:0009295: nucleoid4.52E-02
68GO:0000932: P-body4.91E-02
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Gene type



Gene DE type