Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G09900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0008298: intracellular mRNA localization0.00E+00
2GO:0006435: threonyl-tRNA aminoacylation2.78E-05
3GO:0002230: positive regulation of defense response to virus by host5.03E-05
4GO:1901672: positive regulation of systemic acquired resistance5.03E-05
5GO:0031935: regulation of chromatin silencing1.07E-04
6GO:0009765: photosynthesis, light harvesting1.07E-04
7GO:0006282: regulation of DNA repair1.40E-04
8GO:0016123: xanthophyll biosynthetic process1.40E-04
9GO:0034052: positive regulation of plant-type hypersensitive response1.40E-04
10GO:0016120: carotene biosynthetic process1.40E-04
11GO:0010189: vitamin E biosynthetic process2.11E-04
12GO:0071470: cellular response to osmotic stress2.11E-04
13GO:1900056: negative regulation of leaf senescence2.50E-04
14GO:0009787: regulation of abscisic acid-activated signaling pathway2.90E-04
15GO:1900426: positive regulation of defense response to bacterium4.18E-04
16GO:0010380: regulation of chlorophyll biosynthetic process4.18E-04
17GO:0016117: carotenoid biosynthetic process1.13E-03
18GO:0071472: cellular response to salt stress1.25E-03
19GO:0008654: phospholipid biosynthetic process1.37E-03
20GO:0010193: response to ozone1.44E-03
21GO:0031047: gene silencing by RNA1.50E-03
22GO:0051607: defense response to virus1.76E-03
23GO:0009816: defense response to bacterium, incompatible interaction1.90E-03
24GO:0009910: negative regulation of flower development2.41E-03
25GO:0010224: response to UV-B3.81E-03
26GO:0009626: plant-type hypersensitive response4.35E-03
27GO:0016569: covalent chromatin modification4.54E-03
28GO:0009658: chloroplast organization9.34E-03
29GO:0006970: response to osmotic stress9.84E-03
30GO:0009793: embryo development ending in seed dormancy1.01E-02
31GO:0016042: lipid catabolic process1.40E-02
32GO:0006281: DNA repair1.43E-02
33GO:0009738: abscisic acid-activated signaling pathway2.10E-02
34GO:0009611: response to wounding2.18E-02
35GO:0045893: positive regulation of transcription, DNA-templated2.37E-02
36GO:0006457: protein folding2.59E-02
37GO:0055114: oxidation-reduction process3.77E-02
RankGO TermAdjusted P value
1GO:0010276: phytol kinase activity0.00E+00
2GO:0045435: lycopene epsilon cyclase activity0.00E+00
3GO:0004829: threonine-tRNA ligase activity2.78E-05
4GO:0004605: phosphatidate cytidylyltransferase activity1.74E-04
5GO:0003723: RNA binding1.23E-03
6GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen5.62E-03
7GO:0003729: mRNA binding6.47E-03
8GO:0016788: hydrolase activity, acting on ester bonds9.46E-03
9GO:0052689: carboxylic ester hydrolase activity1.17E-02
10GO:0009055: electron carrier activity1.50E-02
11GO:0004519: endonuclease activity1.52E-02
12GO:0016887: ATPase activity1.95E-02
13GO:0000166: nucleotide binding2.15E-02
14GO:0005507: copper ion binding2.77E-02
15GO:0003824: catalytic activity3.80E-02
16GO:0016491: oxidoreductase activity4.33E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast2.34E-04
2GO:0009543: chloroplast thylakoid lumen3.38E-04
3GO:0048471: perinuclear region of cytoplasm5.09E-04
4GO:0030095: chloroplast photosystem II6.53E-04
5GO:0031969: chloroplast membrane8.65E-04
6GO:0031977: thylakoid lumen2.88E-03
7GO:0009535: chloroplast thylakoid membrane9.75E-03
8GO:0080008: Cul4-RING E3 ubiquitin ligase complex9.97E-03
9GO:0009579: thylakoid2.44E-02
10GO:0005768: endosome3.30E-02
11GO:0009505: plant-type cell wall4.18E-02
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Gene type



Gene DE type