GO Enrichment Analysis of Co-expressed Genes with
AT4G07410
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051050: positive regulation of transport | 0.00E+00 |
| 2 | GO:0032049: cardiolipin biosynthetic process | 0.00E+00 |
| 3 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 4 | GO:0006364: rRNA processing | 5.28E-10 |
| 5 | GO:0006412: translation | 1.28E-08 |
| 6 | GO:0010162: seed dormancy process | 2.60E-07 |
| 7 | GO:0001731: formation of translation preinitiation complex | 5.34E-06 |
| 8 | GO:1990258: histone glutamine methylation | 4.18E-05 |
| 9 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 4.18E-05 |
| 10 | GO:0006434: seryl-tRNA aminoacylation | 4.18E-05 |
| 11 | GO:0000494: box C/D snoRNA 3'-end processing | 4.18E-05 |
| 12 | GO:0006446: regulation of translational initiation | 6.58E-05 |
| 13 | GO:0009944: polarity specification of adaxial/abaxial axis | 9.57E-05 |
| 14 | GO:0045859: regulation of protein kinase activity | 1.04E-04 |
| 15 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 1.04E-04 |
| 16 | GO:0048569: post-embryonic animal organ development | 1.04E-04 |
| 17 | GO:0009294: DNA mediated transformation | 1.45E-04 |
| 18 | GO:0008033: tRNA processing | 1.88E-04 |
| 19 | GO:0009855: determination of bilateral symmetry | 2.63E-04 |
| 20 | GO:0042273: ribosomal large subunit biogenesis | 3.53E-04 |
| 21 | GO:0042254: ribosome biogenesis | 4.41E-04 |
| 22 | GO:0031167: rRNA methylation | 4.50E-04 |
| 23 | GO:0000470: maturation of LSU-rRNA | 5.51E-04 |
| 24 | GO:0006458: 'de novo' protein folding | 6.58E-04 |
| 25 | GO:0000245: spliceosomal complex assembly | 6.58E-04 |
| 26 | GO:0016444: somatic cell DNA recombination | 6.58E-04 |
| 27 | GO:0009955: adaxial/abaxial pattern specification | 6.58E-04 |
| 28 | GO:0080186: developmental vegetative growth | 7.69E-04 |
| 29 | GO:0001558: regulation of cell growth | 1.00E-03 |
| 30 | GO:0043562: cellular response to nitrogen levels | 1.00E-03 |
| 31 | GO:0001510: RNA methylation | 1.00E-03 |
| 32 | GO:0048507: meristem development | 1.13E-03 |
| 33 | GO:0016569: covalent chromatin modification | 1.34E-03 |
| 34 | GO:0009553: embryo sac development | 1.38E-03 |
| 35 | GO:0030422: production of siRNA involved in RNA interference | 1.39E-03 |
| 36 | GO:0006820: anion transport | 1.67E-03 |
| 37 | GO:0006626: protein targeting to mitochondrion | 1.82E-03 |
| 38 | GO:0006413: translational initiation | 2.26E-03 |
| 39 | GO:0030150: protein import into mitochondrial matrix | 2.46E-03 |
| 40 | GO:0000027: ribosomal large subunit assembly | 2.46E-03 |
| 41 | GO:0051302: regulation of cell division | 2.62E-03 |
| 42 | GO:0006334: nucleosome assembly | 2.80E-03 |
| 43 | GO:0061077: chaperone-mediated protein folding | 2.80E-03 |
| 44 | GO:0010501: RNA secondary structure unwinding | 3.71E-03 |
| 45 | GO:0010197: polar nucleus fusion | 3.91E-03 |
| 46 | GO:0009960: endosperm development | 3.91E-03 |
| 47 | GO:0008654: phospholipid biosynthetic process | 4.31E-03 |
| 48 | GO:0016579: protein deubiquitination | 5.59E-03 |
| 49 | GO:0045892: negative regulation of transcription, DNA-templated | 5.60E-03 |
| 50 | GO:0042128: nitrate assimilation | 6.27E-03 |
| 51 | GO:0010311: lateral root formation | 7.22E-03 |
| 52 | GO:0006811: ion transport | 7.47E-03 |
| 53 | GO:0000724: double-strand break repair via homologous recombination | 7.97E-03 |
| 54 | GO:0009867: jasmonic acid mediated signaling pathway | 8.23E-03 |
| 55 | GO:0008283: cell proliferation | 9.82E-03 |
| 56 | GO:0009744: response to sucrose | 9.82E-03 |
| 57 | GO:0000154: rRNA modification | 1.07E-02 |
| 58 | GO:0006457: protein folding | 1.56E-02 |
| 59 | GO:0006633: fatty acid biosynthetic process | 2.14E-02 |
| 60 | GO:0030154: cell differentiation | 2.67E-02 |
| 61 | GO:0046686: response to cadmium ion | 3.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008808: cardiolipin synthase activity | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 8.40E-11 |
| 3 | GO:0003723: RNA binding | 1.06E-06 |
| 4 | GO:0004407: histone deacetylase activity | 1.31E-06 |
| 5 | GO:0031369: translation initiation factor binding | 5.34E-06 |
| 6 | GO:0030515: snoRNA binding | 1.07E-05 |
| 7 | GO:0044183: protein binding involved in protein folding | 4.16E-05 |
| 8 | GO:1990259: histone-glutamine methyltransferase activity | 4.18E-05 |
| 9 | GO:0004828: serine-tRNA ligase activity | 4.18E-05 |
| 10 | GO:0004679: AMP-activated protein kinase activity | 4.18E-05 |
| 11 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 1.04E-04 |
| 12 | GO:0030572: phosphatidyltransferase activity | 1.04E-04 |
| 13 | GO:0008649: rRNA methyltransferase activity | 1.78E-04 |
| 14 | GO:0003743: translation initiation factor activity | 2.99E-04 |
| 15 | GO:0004040: amidase activity | 4.50E-04 |
| 16 | GO:0019887: protein kinase regulator activity | 6.58E-04 |
| 17 | GO:0008235: metalloexopeptidase activity | 7.69E-04 |
| 18 | GO:0015288: porin activity | 8.84E-04 |
| 19 | GO:0008135: translation factor activity, RNA binding | 1.00E-03 |
| 20 | GO:0008308: voltage-gated anion channel activity | 1.00E-03 |
| 21 | GO:0001055: RNA polymerase II activity | 1.25E-03 |
| 22 | GO:0008026: ATP-dependent helicase activity | 1.50E-03 |
| 23 | GO:0001054: RNA polymerase I activity | 1.53E-03 |
| 24 | GO:0001056: RNA polymerase III activity | 1.67E-03 |
| 25 | GO:0019843: rRNA binding | 1.77E-03 |
| 26 | GO:0015266: protein channel activity | 1.82E-03 |
| 27 | GO:0000166: nucleotide binding | 1.86E-03 |
| 28 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.80E-03 |
| 29 | GO:0005524: ATP binding | 3.74E-03 |
| 30 | GO:0010181: FMN binding | 4.11E-03 |
| 31 | GO:0004004: ATP-dependent RNA helicase activity | 6.50E-03 |
| 32 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.98E-03 |
| 33 | GO:0003729: mRNA binding | 7.52E-03 |
| 34 | GO:0030145: manganese ion binding | 7.72E-03 |
| 35 | GO:0005515: protein binding | 8.19E-03 |
| 36 | GO:0003746: translation elongation factor activity | 8.23E-03 |
| 37 | GO:0051539: 4 iron, 4 sulfur cluster binding | 9.01E-03 |
| 38 | GO:0042393: histone binding | 9.01E-03 |
| 39 | GO:0016787: hydrolase activity | 1.20E-02 |
| 40 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.21E-02 |
| 41 | GO:0051082: unfolded protein binding | 1.55E-02 |
| 42 | GO:0016829: lyase activity | 1.93E-02 |
| 43 | GO:0003676: nucleic acid binding | 2.72E-02 |
| 44 | GO:0003682: chromatin binding | 3.26E-02 |
| 45 | GO:0008233: peptidase activity | 3.60E-02 |
| 46 | GO:0003924: GTPase activity | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 1.12E-18 |
| 3 | GO:0022626: cytosolic ribosome | 5.47E-08 |
| 4 | GO:0005829: cytosol | 2.03E-07 |
| 5 | GO:0032040: small-subunit processome | 4.46E-07 |
| 6 | GO:0005840: ribosome | 8.82E-07 |
| 7 | GO:0016282: eukaryotic 43S preinitiation complex | 5.34E-06 |
| 8 | GO:0031428: box C/D snoRNP complex | 5.34E-06 |
| 9 | GO:0033290: eukaryotic 48S preinitiation complex | 7.76E-06 |
| 10 | GO:0022627: cytosolic small ribosomal subunit | 2.44E-05 |
| 11 | GO:0005852: eukaryotic translation initiation factor 3 complex | 4.16E-05 |
| 12 | GO:0022625: cytosolic large ribosomal subunit | 5.50E-05 |
| 13 | GO:0015934: large ribosomal subunit | 5.49E-04 |
| 14 | GO:0031359: integral component of chloroplast outer membrane | 7.69E-04 |
| 15 | GO:0046930: pore complex | 1.00E-03 |
| 16 | GO:0005742: mitochondrial outer membrane translocase complex | 1.00E-03 |
| 17 | GO:0005634: nucleus | 1.07E-03 |
| 18 | GO:0005736: DNA-directed RNA polymerase I complex | 1.13E-03 |
| 19 | GO:0005666: DNA-directed RNA polymerase III complex | 1.25E-03 |
| 20 | GO:0015030: Cajal body | 1.25E-03 |
| 21 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.39E-03 |
| 22 | GO:0048471: perinuclear region of cytoplasm | 1.53E-03 |
| 23 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.67E-03 |
| 24 | GO:0005737: cytoplasm | 2.19E-03 |
| 25 | GO:0005741: mitochondrial outer membrane | 2.80E-03 |
| 26 | GO:0015935: small ribosomal subunit | 2.80E-03 |
| 27 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.08E-03 |
| 28 | GO:0016592: mediator complex | 4.72E-03 |
| 29 | GO:0030529: intracellular ribonucleoprotein complex | 5.81E-03 |
| 30 | GO:0005743: mitochondrial inner membrane | 6.32E-03 |
| 31 | GO:0005834: heterotrimeric G-protein complex | 1.43E-02 |
| 32 | GO:0005774: vacuolar membrane | 2.19E-02 |
| 33 | GO:0005618: cell wall | 2.60E-02 |
| 34 | GO:0009506: plasmodesma | 3.90E-02 |