GO Enrichment Analysis of Co-expressed Genes with
AT4G07390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071284: cellular response to lead ion | 0.00E+00 |
| 2 | GO:0042362: fat-soluble vitamin biosynthetic process | 0.00E+00 |
| 3 | GO:1901799: negative regulation of proteasomal protein catabolic process | 0.00E+00 |
| 4 | GO:0001881: receptor recycling | 0.00E+00 |
| 5 | GO:0048870: cell motility | 0.00E+00 |
| 6 | GO:0070207: protein homotrimerization | 0.00E+00 |
| 7 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.05E-06 |
| 8 | GO:0008333: endosome to lysosome transport | 1.29E-05 |
| 9 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 1.64E-04 |
| 10 | GO:0009240: isopentenyl diphosphate biosynthetic process | 2.80E-04 |
| 11 | GO:0031468: nuclear envelope reassembly | 2.80E-04 |
| 12 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.30E-04 |
| 13 | GO:0006914: autophagy | 4.38E-04 |
| 14 | GO:0006452: translational frameshifting | 6.14E-04 |
| 15 | GO:0009915: phloem sucrose loading | 6.14E-04 |
| 16 | GO:0006212: uracil catabolic process | 6.14E-04 |
| 17 | GO:0080026: response to indolebutyric acid | 6.14E-04 |
| 18 | GO:0019483: beta-alanine biosynthetic process | 6.14E-04 |
| 19 | GO:0007163: establishment or maintenance of cell polarity | 6.14E-04 |
| 20 | GO:0006432: phenylalanyl-tRNA aminoacylation | 6.14E-04 |
| 21 | GO:0045905: positive regulation of translational termination | 6.14E-04 |
| 22 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 6.14E-04 |
| 23 | GO:0045901: positive regulation of translational elongation | 6.14E-04 |
| 24 | GO:0006123: mitochondrial electron transport, cytochrome c to oxygen | 6.14E-04 |
| 25 | GO:0046939: nucleotide phosphorylation | 6.14E-04 |
| 26 | GO:0006807: nitrogen compound metabolic process | 8.37E-04 |
| 27 | GO:0055114: oxidation-reduction process | 8.42E-04 |
| 28 | GO:0045793: positive regulation of cell size | 9.96E-04 |
| 29 | GO:0006760: folic acid-containing compound metabolic process | 9.96E-04 |
| 30 | GO:0009853: photorespiration | 1.03E-03 |
| 31 | GO:0006487: protein N-linked glycosylation | 1.29E-03 |
| 32 | GO:0006107: oxaloacetate metabolic process | 1.42E-03 |
| 33 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.42E-03 |
| 34 | GO:1901332: negative regulation of lateral root development | 1.42E-03 |
| 35 | GO:0006168: adenine salvage | 1.42E-03 |
| 36 | GO:0080024: indolebutyric acid metabolic process | 1.42E-03 |
| 37 | GO:0032877: positive regulation of DNA endoreduplication | 1.42E-03 |
| 38 | GO:0046836: glycolipid transport | 1.42E-03 |
| 39 | GO:0006166: purine ribonucleoside salvage | 1.42E-03 |
| 40 | GO:0061077: chaperone-mediated protein folding | 1.56E-03 |
| 41 | GO:0006012: galactose metabolic process | 1.86E-03 |
| 42 | GO:0010387: COP9 signalosome assembly | 1.91E-03 |
| 43 | GO:0032366: intracellular sterol transport | 1.91E-03 |
| 44 | GO:0051781: positive regulation of cell division | 1.91E-03 |
| 45 | GO:0042147: retrograde transport, endosome to Golgi | 2.19E-03 |
| 46 | GO:0015991: ATP hydrolysis coupled proton transport | 2.36E-03 |
| 47 | GO:0009697: salicylic acid biosynthetic process | 2.43E-03 |
| 48 | GO:0030041: actin filament polymerization | 2.43E-03 |
| 49 | GO:0044209: AMP salvage | 2.43E-03 |
| 50 | GO:0006662: glycerol ether metabolic process | 2.54E-03 |
| 51 | GO:0006555: methionine metabolic process | 3.00E-03 |
| 52 | GO:0043248: proteasome assembly | 3.00E-03 |
| 53 | GO:0019509: L-methionine salvage from methylthioadenosine | 3.62E-03 |
| 54 | GO:0010189: vitamin E biosynthetic process | 3.62E-03 |
| 55 | GO:0016192: vesicle-mediated transport | 3.63E-03 |
| 56 | GO:0000338: protein deneddylation | 4.26E-03 |
| 57 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 4.26E-03 |
| 58 | GO:0032880: regulation of protein localization | 4.26E-03 |
| 59 | GO:0006506: GPI anchor biosynthetic process | 4.95E-03 |
| 60 | GO:0009690: cytokinin metabolic process | 4.95E-03 |
| 61 | GO:0000028: ribosomal small subunit assembly | 4.95E-03 |
| 62 | GO:0045010: actin nucleation | 4.95E-03 |
| 63 | GO:0015996: chlorophyll catabolic process | 5.67E-03 |
| 64 | GO:0043562: cellular response to nitrogen levels | 5.67E-03 |
| 65 | GO:0009245: lipid A biosynthetic process | 6.43E-03 |
| 66 | GO:0009821: alkaloid biosynthetic process | 6.43E-03 |
| 67 | GO:0006754: ATP biosynthetic process | 6.43E-03 |
| 68 | GO:0048589: developmental growth | 6.43E-03 |
| 69 | GO:0000902: cell morphogenesis | 6.43E-03 |
| 70 | GO:0010043: response to zinc ion | 6.83E-03 |
| 71 | GO:0034599: cellular response to oxidative stress | 7.83E-03 |
| 72 | GO:0006099: tricarboxylic acid cycle | 7.83E-03 |
| 73 | GO:0000103: sulfate assimilation | 8.04E-03 |
| 74 | GO:0043069: negative regulation of programmed cell death | 8.04E-03 |
| 75 | GO:0030148: sphingolipid biosynthetic process | 8.90E-03 |
| 76 | GO:0010015: root morphogenesis | 8.90E-03 |
| 77 | GO:0006631: fatty acid metabolic process | 8.91E-03 |
| 78 | GO:0016925: protein sumoylation | 9.79E-03 |
| 79 | GO:0071365: cellular response to auxin stimulus | 9.79E-03 |
| 80 | GO:0046686: response to cadmium ion | 1.01E-02 |
| 81 | GO:0009691: cytokinin biosynthetic process | 1.07E-02 |
| 82 | GO:0006108: malate metabolic process | 1.07E-02 |
| 83 | GO:0002237: response to molecule of bacterial origin | 1.17E-02 |
| 84 | GO:0007034: vacuolar transport | 1.17E-02 |
| 85 | GO:0009266: response to temperature stimulus | 1.17E-02 |
| 86 | GO:0007030: Golgi organization | 1.26E-02 |
| 87 | GO:0009901: anther dehiscence | 1.26E-02 |
| 88 | GO:0010039: response to iron ion | 1.26E-02 |
| 89 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.37E-02 |
| 90 | GO:0009116: nucleoside metabolic process | 1.47E-02 |
| 91 | GO:0006406: mRNA export from nucleus | 1.47E-02 |
| 92 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.47E-02 |
| 93 | GO:0008299: isoprenoid biosynthetic process | 1.58E-02 |
| 94 | GO:0051302: regulation of cell division | 1.58E-02 |
| 95 | GO:0048511: rhythmic process | 1.68E-02 |
| 96 | GO:0010431: seed maturation | 1.68E-02 |
| 97 | GO:0045454: cell redox homeostasis | 1.87E-02 |
| 98 | GO:0006886: intracellular protein transport | 1.95E-02 |
| 99 | GO:0019722: calcium-mediated signaling | 2.03E-02 |
| 100 | GO:0010089: xylem development | 2.03E-02 |
| 101 | GO:0015031: protein transport | 2.04E-02 |
| 102 | GO:0000398: mRNA splicing, via spliceosome | 2.15E-02 |
| 103 | GO:0034220: ion transmembrane transport | 2.27E-02 |
| 104 | GO:0000413: protein peptidyl-prolyl isomerization | 2.27E-02 |
| 105 | GO:0010118: stomatal movement | 2.27E-02 |
| 106 | GO:0016042: lipid catabolic process | 2.35E-02 |
| 107 | GO:0015986: ATP synthesis coupled proton transport | 2.52E-02 |
| 108 | GO:0061025: membrane fusion | 2.52E-02 |
| 109 | GO:0006623: protein targeting to vacuole | 2.65E-02 |
| 110 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.78E-02 |
| 111 | GO:0009630: gravitropism | 2.91E-02 |
| 112 | GO:0010090: trichome morphogenesis | 3.05E-02 |
| 113 | GO:0010150: leaf senescence | 3.22E-02 |
| 114 | GO:0010286: heat acclimation | 3.33E-02 |
| 115 | GO:0000910: cytokinesis | 3.47E-02 |
| 116 | GO:0051607: defense response to virus | 3.47E-02 |
| 117 | GO:0009615: response to virus | 3.62E-02 |
| 118 | GO:0015995: chlorophyll biosynthetic process | 4.06E-02 |
| 119 | GO:0006950: response to stress | 4.06E-02 |
| 120 | GO:0009817: defense response to fungus, incompatible interaction | 4.37E-02 |
| 121 | GO:0010311: lateral root formation | 4.52E-02 |
| 122 | GO:0048767: root hair elongation | 4.52E-02 |
| 123 | GO:0006499: N-terminal protein myristoylation | 4.68E-02 |
| 124 | GO:0000724: double-strand break repair via homologous recombination | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003837: beta-ureidopropionase activity | 0.00E+00 |
| 2 | GO:0050152: omega-amidase activity | 0.00E+00 |
| 3 | GO:0010176: homogentisate phytyltransferase activity | 0.00E+00 |
| 4 | GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 5 | GO:0004298: threonine-type endopeptidase activity | 2.42E-13 |
| 6 | GO:0008233: peptidase activity | 1.58E-06 |
| 7 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 2.26E-05 |
| 8 | GO:0004129: cytochrome-c oxidase activity | 3.01E-05 |
| 9 | GO:0004576: oligosaccharyl transferase activity | 5.21E-05 |
| 10 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 8.25E-05 |
| 11 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.46E-04 |
| 12 | GO:0004034: aldose 1-epimerase activity | 2.73E-04 |
| 13 | GO:0102293: pheophytinase b activity | 2.80E-04 |
| 14 | GO:0019786: Atg8-specific protease activity | 2.80E-04 |
| 15 | GO:0004452: isopentenyl-diphosphate delta-isomerase activity | 2.80E-04 |
| 16 | GO:0047560: 3-dehydrosphinganine reductase activity | 2.80E-04 |
| 17 | GO:0004826: phenylalanine-tRNA ligase activity | 6.14E-04 |
| 18 | GO:0019779: Atg8 activating enzyme activity | 6.14E-04 |
| 19 | GO:0008517: folic acid transporter activity | 6.14E-04 |
| 20 | GO:0047746: chlorophyllase activity | 6.14E-04 |
| 21 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 9.96E-04 |
| 22 | GO:0004557: alpha-galactosidase activity | 9.96E-04 |
| 23 | GO:0032403: protein complex binding | 9.96E-04 |
| 24 | GO:0052692: raffinose alpha-galactosidase activity | 9.96E-04 |
| 25 | GO:0008430: selenium binding | 9.96E-04 |
| 26 | GO:0005528: FK506 binding | 1.29E-03 |
| 27 | GO:0019201: nucleotide kinase activity | 1.42E-03 |
| 28 | GO:0003999: adenine phosphoribosyltransferase activity | 1.42E-03 |
| 29 | GO:0017089: glycolipid transporter activity | 1.42E-03 |
| 30 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.91E-03 |
| 31 | GO:0019776: Atg8 ligase activity | 1.91E-03 |
| 32 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.91E-03 |
| 33 | GO:0004659: prenyltransferase activity | 1.91E-03 |
| 34 | GO:0010011: auxin binding | 1.91E-03 |
| 35 | GO:0051861: glycolipid binding | 1.91E-03 |
| 36 | GO:0047134: protein-disulfide reductase activity | 2.19E-03 |
| 37 | GO:0005496: steroid binding | 2.43E-03 |
| 38 | GO:0031386: protein tag | 2.43E-03 |
| 39 | GO:0016788: hydrolase activity, acting on ester bonds | 2.49E-03 |
| 40 | GO:0004791: thioredoxin-disulfide reductase activity | 2.73E-03 |
| 41 | GO:0031177: phosphopantetheine binding | 3.00E-03 |
| 42 | GO:0051117: ATPase binding | 3.00E-03 |
| 43 | GO:0015035: protein disulfide oxidoreductase activity | 3.36E-03 |
| 44 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.57E-03 |
| 45 | GO:0004017: adenylate kinase activity | 3.62E-03 |
| 46 | GO:0000035: acyl binding | 3.62E-03 |
| 47 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.62E-03 |
| 48 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 4.26E-03 |
| 49 | GO:0008320: protein transmembrane transporter activity | 4.26E-03 |
| 50 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 4.95E-03 |
| 51 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 4.95E-03 |
| 52 | GO:0043022: ribosome binding | 4.95E-03 |
| 53 | GO:0015078: hydrogen ion transmembrane transporter activity | 5.67E-03 |
| 54 | GO:0000989: transcription factor activity, transcription factor binding | 6.43E-03 |
| 55 | GO:0045309: protein phosphorylated amino acid binding | 7.22E-03 |
| 56 | GO:0016844: strictosidine synthase activity | 7.22E-03 |
| 57 | GO:0051539: 4 iron, 4 sulfur cluster binding | 8.54E-03 |
| 58 | GO:0008794: arsenate reductase (glutaredoxin) activity | 8.90E-03 |
| 59 | GO:0019904: protein domain specific binding | 8.90E-03 |
| 60 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 8.90E-03 |
| 61 | GO:0008327: methyl-CpG binding | 8.90E-03 |
| 62 | GO:0008559: xenobiotic-transporting ATPase activity | 8.90E-03 |
| 63 | GO:0000049: tRNA binding | 9.79E-03 |
| 64 | GO:0004089: carbonate dehydratase activity | 1.07E-02 |
| 65 | GO:0043130: ubiquitin binding | 1.47E-02 |
| 66 | GO:0052689: carboxylic ester hydrolase activity | 1.69E-02 |
| 67 | GO:0022857: transmembrane transporter activity | 1.76E-02 |
| 68 | GO:0016746: transferase activity, transferring acyl groups | 1.92E-02 |
| 69 | GO:0008080: N-acetyltransferase activity | 2.39E-02 |
| 70 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.39E-02 |
| 71 | GO:0016853: isomerase activity | 2.52E-02 |
| 72 | GO:0004872: receptor activity | 2.65E-02 |
| 73 | GO:0020037: heme binding | 2.94E-02 |
| 74 | GO:0008017: microtubule binding | 3.37E-02 |
| 75 | GO:0015250: water channel activity | 3.62E-02 |
| 76 | GO:0051213: dioxygenase activity | 3.62E-02 |
| 77 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 3.91E-02 |
| 78 | GO:0004683: calmodulin-dependent protein kinase activity | 4.06E-02 |
| 79 | GO:0042802: identical protein binding | 4.09E-02 |
| 80 | GO:0003735: structural constituent of ribosome | 4.30E-02 |
| 81 | GO:0004222: metalloendopeptidase activity | 4.68E-02 |
| 82 | GO:0050897: cobalt ion binding | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 1.82E-15 |
| 2 | GO:0005839: proteasome core complex | 2.42E-13 |
| 3 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.12E-07 |
| 4 | GO:0005747: mitochondrial respiratory chain complex I | 1.84E-07 |
| 5 | GO:0005829: cytosol | 1.79E-06 |
| 6 | GO:0005783: endoplasmic reticulum | 2.95E-06 |
| 7 | GO:0000421: autophagosome membrane | 6.61E-06 |
| 8 | GO:0005773: vacuole | 4.82E-05 |
| 9 | GO:0008250: oligosaccharyltransferase complex | 8.25E-05 |
| 10 | GO:0005758: mitochondrial intermembrane space | 9.43E-05 |
| 11 | GO:0045271: respiratory chain complex I | 1.10E-04 |
| 12 | GO:0030904: retromer complex | 1.20E-04 |
| 13 | GO:0005771: multivesicular body | 1.20E-04 |
| 14 | GO:0031410: cytoplasmic vesicle | 1.44E-04 |
| 15 | GO:0045273: respiratory chain complex II | 2.73E-04 |
| 16 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 2.73E-04 |
| 17 | GO:0005788: endoplasmic reticulum lumen | 5.90E-04 |
| 18 | GO:0005750: mitochondrial respiratory chain complex III | 9.39E-04 |
| 19 | GO:0005838: proteasome regulatory particle | 9.96E-04 |
| 20 | GO:0033180: proton-transporting V-type ATPase, V1 domain | 1.42E-03 |
| 21 | GO:1990726: Lsm1-7-Pat1 complex | 1.42E-03 |
| 22 | GO:0070469: respiratory chain | 1.42E-03 |
| 23 | GO:0005775: vacuolar lumen | 1.42E-03 |
| 24 | GO:0031966: mitochondrial membrane | 1.89E-03 |
| 25 | GO:0033179: proton-transporting V-type ATPase, V0 domain | 1.91E-03 |
| 26 | GO:0005776: autophagosome | 1.91E-03 |
| 27 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 1.91E-03 |
| 28 | GO:0005746: mitochondrial respiratory chain | 2.43E-03 |
| 29 | GO:0005774: vacuolar membrane | 2.71E-03 |
| 30 | GO:0031209: SCAR complex | 3.00E-03 |
| 31 | GO:0005789: endoplasmic reticulum membrane | 3.21E-03 |
| 32 | GO:0005732: small nucleolar ribonucleoprotein complex | 3.62E-03 |
| 33 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 4.26E-03 |
| 34 | GO:0005794: Golgi apparatus | 4.58E-03 |
| 35 | GO:0005688: U6 snRNP | 4.95E-03 |
| 36 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 5.67E-03 |
| 37 | GO:0008180: COP9 signalosome | 6.43E-03 |
| 38 | GO:0005763: mitochondrial small ribosomal subunit | 6.43E-03 |
| 39 | GO:0071011: precatalytic spliceosome | 7.22E-03 |
| 40 | GO:0005740: mitochondrial envelope | 8.04E-03 |
| 41 | GO:0009507: chloroplast | 8.31E-03 |
| 42 | GO:0008541: proteasome regulatory particle, lid subcomplex | 8.90E-03 |
| 43 | GO:0071013: catalytic step 2 spliceosome | 8.90E-03 |
| 44 | GO:0031902: late endosome membrane | 8.91E-03 |
| 45 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 1.26E-02 |
| 46 | GO:0022626: cytosolic ribosome | 1.36E-02 |
| 47 | GO:0005874: microtubule | 1.43E-02 |
| 48 | GO:0031969: chloroplast membrane | 1.49E-02 |
| 49 | GO:0005737: cytoplasm | 1.79E-02 |
| 50 | GO:0016020: membrane | 2.62E-02 |
| 51 | GO:0005759: mitochondrial matrix | 2.94E-02 |
| 52 | GO:0071944: cell periphery | 3.05E-02 |
| 53 | GO:0032580: Golgi cisterna membrane | 3.19E-02 |
| 54 | GO:0005730: nucleolus | 3.30E-02 |
| 55 | GO:0000932: P-body | 3.62E-02 |
| 56 | GO:0005739: mitochondrion | 3.81E-02 |
| 57 | GO:0005840: ribosome | 4.38E-02 |
| 58 | GO:0000325: plant-type vacuole | 4.84E-02 |
| 59 | GO:0015934: large ribosomal subunit | 4.84E-02 |
| 60 | GO:0000786: nucleosome | 5.00E-02 |