co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G05160

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006592: ornithine biosynthetic process	0.00E+00
2	GO:0006593: ornithine catabolic process	0.00E+00
3	GO:0015833: peptide transport	0.00E+00
4	GO:0043171: peptide catabolic process	0.00E+00
5	GO:0023052: signaling	0.00E+00
6	GO:0042430: indole-containing compound metabolic process	0.00E+00
7	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
8	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
9	GO:0042908: xenobiotic transport	0.00E+00
10	GO:0055114: oxidation-reduction process	5.12E-06
11	GO:0015991: ATP hydrolysis coupled proton transport	3.34E-05
12	GO:0006096: glycolytic process	4.11E-05
13	GO:0006102: isocitrate metabolic process	6.58E-05
14	GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic	1.10E-04
15	GO:0006560: proline metabolic process	1.10E-04
16	GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport	1.10E-04
17	GO:0061014: positive regulation of mRNA catabolic process	1.10E-04
18	GO:0010265: SCF complex assembly	1.10E-04
19	GO:0019544: arginine catabolic process to glutamate	1.10E-04
20	GO:0015798: myo-inositol transport	1.10E-04
21	GO:0046686: response to cadmium ion	1.63E-04
22	GO:0006099: tricarboxylic acid cycle	2.03E-04
23	GO:0006006: glucose metabolic process	2.30E-04
24	GO:0046939: nucleotide phosphorylation	2.57E-04
25	GO:0010133: proline catabolic process to glutamate	2.57E-04
26	GO:0009915: phloem sucrose loading	2.57E-04
27	GO:0006212: uracil catabolic process	2.57E-04
28	GO:0006101: citrate metabolic process	2.57E-04
29	GO:0019388: galactose catabolic process	2.57E-04
30	GO:0019483: beta-alanine biosynthetic process	2.57E-04
31	GO:0042939: tripeptide transport	2.57E-04
32	GO:0097054: L-glutamate biosynthetic process	2.57E-04
33	GO:1990069: stomatal opening	2.57E-04
34	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	4.25E-04
35	GO:0046034: ATP metabolic process	4.25E-04
36	GO:0051646: mitochondrion localization	4.25E-04
37	GO:0040009: regulation of growth rate	4.25E-04
38	GO:0015992: proton transport	4.43E-04
39	GO:0055085: transmembrane transport	5.92E-04
40	GO:0006537: glutamate biosynthetic process	6.10E-04
41	GO:0010587: miRNA catabolic process	6.10E-04
42	GO:0015700: arsenite transport	6.10E-04
43	GO:0009590: detection of gravity	6.10E-04
44	GO:0001676: long-chain fatty acid metabolic process	6.10E-04
45	GO:0010118: stomatal movement	6.67E-04
46	GO:0015986: ATP synthesis coupled proton transport	7.69E-04
47	GO:0019676: ammonia assimilation cycle	8.10E-04
48	GO:0032366: intracellular sterol transport	8.10E-04
49	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	8.10E-04
50	GO:0042938: dipeptide transport	8.10E-04
51	GO:0006623: protein targeting to vacuole	8.23E-04
52	GO:0042744: hydrogen peroxide catabolic process	9.71E-04
53	GO:0006097: glyoxylate cycle	1.02E-03
54	GO:0009435: NAD biosynthetic process	1.02E-03
55	GO:0009697: salicylic acid biosynthetic process	1.02E-03
56	GO:0006564: L-serine biosynthetic process	1.02E-03
57	GO:0006751: glutathione catabolic process	1.25E-03
58	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.25E-03
59	GO:0003006: developmental process involved in reproduction	1.25E-03
60	GO:0006561: proline biosynthetic process	1.25E-03
61	GO:0010189: vitamin E biosynthetic process	1.49E-03
62	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.49E-03
63	GO:0010044: response to aluminum ion	1.75E-03
64	GO:0070370: cellular heat acclimation	1.75E-03
65	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.75E-03
66	GO:0042773: ATP synthesis coupled electron transport	1.75E-03
67	GO:0005978: glycogen biosynthetic process	2.03E-03
68	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.03E-03
69	GO:0006402: mRNA catabolic process	2.03E-03
70	GO:0048658: anther wall tapetum development	2.03E-03
71	GO:0040029: regulation of gene expression, epigenetic	2.03E-03
72	GO:0009853: photorespiration	2.04E-03
73	GO:0006526: arginine biosynthetic process	2.32E-03
74	GO:0043562: cellular response to nitrogen levels	2.32E-03
75	GO:0006631: fatty acid metabolic process	2.41E-03
76	GO:0009926: auxin polar transport	2.61E-03
77	GO:0046685: response to arsenic-containing substance	2.62E-03
78	GO:0009821: alkaloid biosynthetic process	2.62E-03
79	GO:0080144: amino acid homeostasis	2.62E-03
80	GO:0006754: ATP biosynthetic process	2.62E-03
81	GO:0009060: aerobic respiration	2.62E-03
82	GO:0005975: carbohydrate metabolic process	2.78E-03
83	GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	2.93E-03
84	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.93E-03
85	GO:0006855: drug transmembrane transport	3.04E-03
86	GO:0044550: secondary metabolite biosynthetic process	3.10E-03
87	GO:0009641: shade avoidance	3.25E-03
88	GO:0010192: mucilage biosynthetic process	3.25E-03
89	GO:0006896: Golgi to vacuole transport	3.25E-03
90	GO:0072593: reactive oxygen species metabolic process	3.59E-03
91	GO:0018119: peptidyl-cysteine S-nitrosylation	3.59E-03
92	GO:0016485: protein processing	3.59E-03
93	GO:0048229: gametophyte development	3.59E-03
94	GO:0002213: defense response to insect	3.93E-03
95	GO:0006094: gluconeogenesis	4.30E-03
96	GO:0006807: nitrogen compound metabolic process	4.30E-03
97	GO:0006108: malate metabolic process	4.30E-03
98	GO:0009626: plant-type hypersensitive response	4.41E-03
99	GO:0009266: response to temperature stimulus	4.66E-03
100	GO:0007034: vacuolar transport	4.66E-03
101	GO:0007030: Golgi organization	5.04E-03
102	GO:0009901: anther dehiscence	5.04E-03
103	GO:0010039: response to iron ion	5.04E-03
104	GO:0090351: seedling development	5.04E-03
105	GO:0006636: unsaturated fatty acid biosynthetic process	5.44E-03
106	GO:0042742: defense response to bacterium	5.69E-03
107	GO:0006979: response to oxidative stress	5.76E-03
108	GO:0009058: biosynthetic process	6.56E-03
109	GO:0048511: rhythmic process	6.67E-03
110	GO:0035428: hexose transmembrane transport	7.11E-03
111	GO:0031348: negative regulation of defense response	7.11E-03
112	GO:0001944: vasculature development	7.55E-03
113	GO:0009625: response to insect	7.55E-03
114	GO:0048443: stamen development	8.00E-03
115	GO:0009735: response to cytokinin	8.45E-03
116	GO:0080022: primary root development	8.93E-03
117	GO:0010051: xylem and phloem pattern formation	8.93E-03
118	GO:0046323: glucose import	9.41E-03
119	GO:0055072: iron ion homeostasis	1.04E-02
120	GO:0019252: starch biosynthetic process	1.04E-02
121	GO:0010193: response to ozone	1.09E-02
122	GO:0009630: gravitropism	1.14E-02
123	GO:0010252: auxin homeostasis	1.25E-02
124	GO:0010286: heat acclimation	1.30E-02
125	GO:0009615: response to virus	1.42E-02
126	GO:0009816: defense response to bacterium, incompatible interaction	1.47E-02
127	GO:0009723: response to ethylene	1.54E-02
128	GO:0006950: response to stress	1.59E-02
129	GO:0009817: defense response to fungus, incompatible interaction	1.71E-02
130	GO:0010311: lateral root formation	1.77E-02
131	GO:0006811: ion transport	1.83E-02
132	GO:0010218: response to far red light	1.83E-02
133	GO:0007568: aging	1.89E-02
134	GO:0010119: regulation of stomatal movement	1.89E-02
135	GO:0009867: jasmonic acid mediated signaling pathway	2.02E-02
136	GO:0045087: innate immune response	2.02E-02
137	GO:0006886: intracellular protein transport	2.05E-02
138	GO:0009414: response to water deprivation	2.25E-02
139	GO:0071555: cell wall organization	2.31E-02
140	GO:0009751: response to salicylic acid	2.41E-02
141	GO:0051707: response to other organism	2.42E-02
142	GO:0009753: response to jasmonic acid	2.63E-02
143	GO:0031347: regulation of defense response	2.77E-02
144	GO:0042538: hyperosmotic salinity response	2.85E-02
145	GO:0006508: proteolysis	3.06E-02
146	GO:0006857: oligopeptide transport	3.14E-02
147	GO:0009909: regulation of flower development	3.22E-02
148	GO:0048316: seed development	3.45E-02
149	GO:0009651: response to salt stress	3.48E-02
150	GO:0009620: response to fungus	3.61E-02
151	GO:0009624: response to nematode	3.85E-02
152	GO:0009555: pollen development	4.33E-02
153	GO:0009611: response to wounding	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
2	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
3	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
4	GO:0003837: beta-ureidopropionase activity	0.00E+00
5	GO:0008734: L-aspartate oxidase activity	0.00E+00
6	GO:0009940: amino-terminal vacuolar sorting propeptide binding	0.00E+00
7	GO:0015197: peptide transporter activity	0.00E+00
8	GO:0015930: glutamate synthase activity	0.00E+00
9	GO:0015334: high-affinity oligopeptide transporter activity	0.00E+00
10	GO:0003842: 1-pyrroline-5-carboxylate dehydrogenase activity	0.00E+00
11	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
12	GO:0008777: acetylornithine deacetylase activity	0.00E+00
13	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
14	GO:0052692: raffinose alpha-galactosidase activity	2.36E-06
15	GO:0004557: alpha-galactosidase activity	2.36E-06
16	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	3.77E-05
17	GO:0004347: glucose-6-phosphate isomerase activity	1.10E-04
18	GO:0010013: N-1-naphthylphthalamic acid binding	1.10E-04
19	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.10E-04
20	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	1.10E-04
21	GO:0070006: metalloaminopeptidase activity	1.10E-04
22	GO:0010209: vacuolar sorting signal binding	1.10E-04
23	GO:0071992: phytochelatin transmembrane transporter activity	1.10E-04
24	GO:0016041: glutamate synthase (ferredoxin) activity	1.10E-04
25	GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	1.10E-04
26	GO:0005507: copper ion binding	1.35E-04
27	GO:0004177: aminopeptidase activity	1.73E-04
28	GO:0008559: xenobiotic-transporting ATPase activity	1.73E-04
29	GO:0051539: 4 iron, 4 sulfur cluster binding	2.29E-04
30	GO:0004617: phosphoglycerate dehydrogenase activity	2.57E-04
31	GO:0003994: aconitate hydratase activity	2.57E-04
32	GO:0047517: 1,4-beta-D-xylan synthase activity	2.57E-04
33	GO:0004534: 5'-3' exoribonuclease activity	2.57E-04
34	GO:0004614: phosphoglucomutase activity	2.57E-04
35	GO:0051980: iron-nicotianamine transmembrane transporter activity	2.57E-04
36	GO:0042937: tripeptide transporter activity	2.57E-04
37	GO:0005366: myo-inositol:proton symporter activity	2.57E-04
38	GO:0008517: folic acid transporter activity	2.57E-04
39	GO:0051287: NAD binding	3.48E-04
40	GO:0016805: dipeptidase activity	4.25E-04
41	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	6.10E-04
42	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	6.10E-04
43	GO:0019201: nucleotide kinase activity	6.10E-04
44	GO:0004449: isocitrate dehydrogenase (NAD+) activity	6.10E-04
45	GO:0016656: monodehydroascorbate reductase (NADH) activity	6.10E-04
46	GO:0020037: heme binding	7.54E-04
47	GO:0008409: 5'-3' exonuclease activity	8.10E-04
48	GO:0042936: dipeptide transporter activity	8.10E-04
49	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	8.10E-04
50	GO:0042277: peptide binding	8.10E-04
51	GO:0004659: prenyltransferase activity	8.10E-04
52	GO:0008137: NADH dehydrogenase (ubiquinone) activity	8.78E-04
53	GO:0004040: amidase activity	1.02E-03
54	GO:0051538: 3 iron, 4 sulfur cluster binding	1.02E-03
55	GO:0002020: protease binding	1.02E-03
56	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.25E-03
57	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.25E-03
58	GO:0016615: malate dehydrogenase activity	1.25E-03
59	GO:0005506: iron ion binding	1.30E-03
60	GO:0102391: decanoate--CoA ligase activity	1.49E-03
61	GO:0004017: adenylate kinase activity	1.49E-03
62	GO:0030060: L-malate dehydrogenase activity	1.49E-03
63	GO:0004656: procollagen-proline 4-dioxygenase activity	1.49E-03
64	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.66E-03
65	GO:0005524: ATP binding	1.74E-03
66	GO:0008235: metalloexopeptidase activity	1.75E-03
67	GO:0004467: long-chain fatty acid-CoA ligase activity	1.75E-03
68	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.03E-03
69	GO:0000287: magnesium ion binding	2.08E-03
70	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	2.62E-03
71	GO:0016844: strictosidine synthase activity	2.93E-03
72	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	2.93E-03
73	GO:0009672: auxin:proton symporter activity	2.93E-03
74	GO:0019825: oxygen binding	3.33E-03
75	GO:0046961: proton-transporting ATPase activity, rotational mechanism	3.59E-03
76	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.87E-03
77	GO:0004521: endoribonuclease activity	3.93E-03
78	GO:0015198: oligopeptide transporter activity	3.93E-03
79	GO:0004089: carbonate dehydratase activity	4.30E-03
80	GO:0010329: auxin efflux transmembrane transporter activity	4.30E-03
81	GO:0004022: alcohol dehydrogenase (NAD) activity	4.30E-03
82	GO:0008266: poly(U) RNA binding	4.66E-03
83	GO:0008270: zinc ion binding	5.67E-03
84	GO:0051536: iron-sulfur cluster binding	5.84E-03
85	GO:0031418: L-ascorbic acid binding	5.84E-03
86	GO:0003954: NADH dehydrogenase activity	5.84E-03
87	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	6.40E-03
88	GO:0030170: pyridoxal phosphate binding	6.91E-03
89	GO:0001085: RNA polymerase II transcription factor binding	9.41E-03
90	GO:0005355: glucose transmembrane transporter activity	9.91E-03
91	GO:0008237: metallopeptidase activity	1.30E-02
92	GO:0004601: peroxidase activity	1.33E-02
93	GO:0016597: amino acid binding	1.36E-02
94	GO:0030247: polysaccharide binding	1.59E-02
95	GO:0004497: monooxygenase activity	1.66E-02
96	GO:0004222: metalloendopeptidase activity	1.83E-02
97	GO:0030145: manganese ion binding	1.89E-02
98	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.89E-02
99	GO:0050897: cobalt ion binding	1.89E-02
100	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.02E-02
101	GO:0005509: calcium ion binding	2.09E-02
102	GO:0050661: NADP binding	2.22E-02
103	GO:0051537: 2 iron, 2 sulfur cluster binding	2.56E-02
104	GO:0005215: transporter activity	2.62E-02
105	GO:0016491: oxidoreductase activity	3.26E-02
106	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.45E-02
107	GO:0016887: ATPase activity	3.78E-02
108	GO:0016746: transferase activity, transferring acyl groups	3.93E-02
109	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0000325: plant-type vacuole	4.04E-09
2	GO:0005759: mitochondrial matrix	1.49E-08
3	GO:0005774: vacuolar membrane	1.43E-06
4	GO:0005773: vacuole	1.52E-06
5	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.06E-05
6	GO:0005747: mitochondrial respiratory chain complex I	4.36E-05
7	GO:0017119: Golgi transport complex	1.48E-04
8	GO:0045254: pyruvate dehydrogenase complex	2.57E-04
9	GO:0005753: mitochondrial proton-transporting ATP synthase complex	2.94E-04
10	GO:0045271: respiratory chain complex I	4.03E-04
11	GO:0046861: glyoxysomal membrane	4.25E-04
12	GO:0005782: peroxisomal matrix	4.25E-04
13	GO:0030124: AP-4 adaptor complex	4.25E-04
14	GO:0033180: proton-transporting V-type ATPase, V1 domain	6.10E-04
15	GO:0016020: membrane	7.59E-04
16	GO:0005844: polysome	8.10E-04
17	GO:0005794: Golgi apparatus	8.35E-04
18	GO:0005802: trans-Golgi network	8.91E-04
19	GO:0005618: cell wall	1.39E-03
20	GO:0005886: plasma membrane	1.87E-03
21	GO:0030131: clathrin adaptor complex	2.03E-03
22	GO:0009514: glyoxysome	2.32E-03
23	GO:0005777: peroxisome	2.40E-03
24	GO:0005829: cytosol	2.46E-03
25	GO:0010494: cytoplasmic stress granule	2.62E-03
26	GO:0031090: organelle membrane	2.62E-03
27	GO:0030665: clathrin-coated vesicle membrane	2.93E-03
28	GO:0030125: clathrin vesicle coat	3.25E-03
29	GO:0031966: mitochondrial membrane	3.27E-03
30	GO:0048046: apoplast	3.90E-03
31	GO:0016021: integral component of membrane	4.14E-03
32	GO:0005750: mitochondrial respiratory chain complex III	4.66E-03
33	GO:0005758: mitochondrial intermembrane space	5.84E-03
34	GO:0005741: mitochondrial outer membrane	6.67E-03
35	GO:0005905: clathrin-coated pit	6.67E-03
36	GO:0005770: late endosome	9.41E-03
37	GO:0005739: mitochondrion	1.19E-02
38	GO:0009570: chloroplast stroma	1.23E-02
39	GO:0010319: stromule	1.30E-02
40	GO:0005783: endoplasmic reticulum	1.39E-02
41	GO:0000932: P-body	1.42E-02
42	GO:0005667: transcription factor complex	1.53E-02
43	GO:0019005: SCF ubiquitin ligase complex	1.71E-02
44	GO:0009506: plasmodesma	1.86E-02
45	GO:0005768: endosome	2.03E-02
46	GO:0031902: late endosome membrane	2.29E-02
47	GO:0090406: pollen tube	2.42E-02
48	GO:0005887: integral component of plasma membrane	3.32E-02
49	GO:0005730: nucleolus	4.44E-02
50	GO:0005623: cell	4.60E-02