co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G04890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019323: pentose catabolic process	0.00E+00
2	GO:0000025: maltose catabolic process	0.00E+00
3	GO:0005983: starch catabolic process	8.26E-06
4	GO:0005980: glycogen catabolic process	1.30E-05
5	GO:1902025: nitrate import	1.30E-05
6	GO:0044262: cellular carbohydrate metabolic process	1.30E-05
7	GO:0032958: inositol phosphate biosynthetic process	1.30E-05
8	GO:0090548: response to nitrate starvation	1.30E-05
9	GO:0000023: maltose metabolic process	1.30E-05
10	GO:0005976: polysaccharide metabolic process	3.42E-05
11	GO:0080055: low-affinity nitrate transport	6.16E-05
12	GO:0009052: pentose-phosphate shunt, non-oxidative branch	9.36E-05
13	GO:0010731: protein glutathionylation	9.36E-05
14	GO:0006020: inositol metabolic process	9.36E-05
15	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.53E-04
16	GO:0006353: DNA-templated transcription, termination	3.46E-04
17	GO:0006783: heme biosynthetic process	4.45E-04
18	GO:0042761: very long-chain fatty acid biosynthetic process	4.96E-04
19	GO:0006633: fatty acid biosynthetic process	5.47E-04
20	GO:0006782: protoporphyrinogen IX biosynthetic process	5.49E-04
21	GO:0009773: photosynthetic electron transport in photosystem I	6.03E-04
22	GO:0010015: root morphogenesis	6.03E-04
23	GO:0010582: floral meristem determinacy	6.58E-04
24	GO:0006006: glucose metabolic process	7.14E-04
25	GO:0009266: response to temperature stimulus	7.72E-04
26	GO:0010025: wax biosynthetic process	8.91E-04
27	GO:0007017: microtubule-based process	1.01E-03
28	GO:0030245: cellulose catabolic process	1.14E-03
29	GO:0042335: cuticle development	1.41E-03
30	GO:0010051: xylem and phloem pattern formation	1.41E-03
31	GO:0009911: positive regulation of flower development	2.18E-03
32	GO:0009607: response to biotic stimulus	2.26E-03
33	GO:0015995: chlorophyll biosynthetic process	2.43E-03
34	GO:0009735: response to cytokinin	2.59E-03
35	GO:0009817: defense response to fungus, incompatible interaction	2.61E-03
36	GO:0006855: drug transmembrane transport	4.03E-03
37	GO:0000165: MAPK cascade	4.13E-03
38	GO:0006857: oligopeptide transport	4.65E-03
39	GO:0009624: response to nematode	5.66E-03
40	GO:0071555: cell wall organization	5.68E-03
41	GO:0045490: pectin catabolic process	8.26E-03
42	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	1.06E-02
43	GO:0080167: response to karrikin	1.31E-02
44	GO:0015979: photosynthesis	1.43E-02
45	GO:0009414: response to water deprivation	4.21E-02
46	GO:0006979: response to oxidative stress	4.31E-02
47	GO:0030154: cell differentiation	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0017046: peptide hormone binding	0.00E+00
2	GO:0004134: 4-alpha-glucanotransferase activity	0.00E+00
3	GO:0008184: glycogen phosphorylase activity	1.30E-05
4	GO:0000828: inositol hexakisphosphate kinase activity	1.30E-05
5	GO:0004853: uroporphyrinogen decarboxylase activity	1.30E-05
6	GO:0004645: phosphorylase activity	1.30E-05
7	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.30E-05
8	GO:0000829: inositol heptakisphosphate kinase activity	1.30E-05
9	GO:0004750: ribulose-phosphate 3-epimerase activity	3.42E-05
10	GO:0010297: heteropolysaccharide binding	3.42E-05
11	GO:0045174: glutathione dehydrogenase (ascorbate) activity	6.16E-05
12	GO:0080054: low-affinity nitrate transmembrane transporter activity	6.16E-05
13	GO:0042277: peptide binding	1.30E-04
14	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.68E-04
15	GO:2001070: starch binding	2.10E-04
16	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	8.91E-04
17	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	8.91E-04
18	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	8.91E-04
19	GO:0030570: pectate lyase activity	1.21E-03
20	GO:0008810: cellulase activity	1.21E-03
21	GO:0005200: structural constituent of cytoskeleton	2.02E-03
22	GO:0004364: glutathione transferase activity	3.53E-03
23	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	5.09E-03
24	GO:0046872: metal ion binding	5.24E-03
25	GO:0016746: transferase activity, transferring acyl groups	5.77E-03
26	GO:0016829: lyase activity	6.98E-03
27	GO:0030170: pyridoxal phosphate binding	7.10E-03
28	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	7.23E-03
29	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	9.77E-03
30	GO:0003924: GTPase activity	1.72E-02
31	GO:0016740: transferase activity	2.99E-02
32	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.16E-02
33	GO:0005525: GTP binding	3.70E-02
34	GO:0003677: DNA binding	4.38E-02
35	GO:0005215: transporter activity	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	2.92E-05
2	GO:0030093: chloroplast photosystem I	3.42E-05
3	GO:0009507: chloroplast	4.37E-05
4	GO:0009538: photosystem I reaction center	3.46E-04
5	GO:0009501: amyloplast	3.46E-04
6	GO:0009579: thylakoid	3.70E-04
7	GO:0045298: tubulin complex	4.45E-04
8	GO:0009508: plastid chromosome	7.14E-04
9	GO:0009941: chloroplast envelope	8.73E-04
10	GO:0009535: chloroplast thylakoid membrane	1.95E-03
11	GO:0009295: nucleoid	2.02E-03
12	GO:0010319: stromule	2.02E-03
13	GO:0009534: chloroplast thylakoid	3.40E-03
14	GO:0010287: plastoglobule	6.36E-03
15	GO:0005874: microtubule	1.27E-02
16	GO:0005886: plasma membrane	2.71E-02
17	GO:0005829: cytosol	3.90E-02
18	GO:0009536: plastid	4.95E-02