GO Enrichment Analysis of Co-expressed Genes with
AT4G03280
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 2 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 3 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 2.23E-17 |
| 6 | GO:0006412: translation | 1.99E-14 |
| 7 | GO:0009735: response to cytokinin | 1.26E-13 |
| 8 | GO:0032544: plastid translation | 3.96E-13 |
| 9 | GO:0042254: ribosome biogenesis | 1.98E-09 |
| 10 | GO:0009409: response to cold | 2.29E-09 |
| 11 | GO:0019464: glycine decarboxylation via glycine cleavage system | 9.22E-08 |
| 12 | GO:0009773: photosynthetic electron transport in photosystem I | 1.10E-07 |
| 13 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.35E-06 |
| 14 | GO:0006000: fructose metabolic process | 5.01E-06 |
| 15 | GO:0010027: thylakoid membrane organization | 1.09E-05 |
| 16 | GO:0009658: chloroplast organization | 1.16E-05 |
| 17 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.58E-05 |
| 18 | GO:0009645: response to low light intensity stimulus | 9.72E-05 |
| 19 | GO:0019252: starch biosynthetic process | 1.12E-04 |
| 20 | GO:0005978: glycogen biosynthetic process | 1.25E-04 |
| 21 | GO:0006002: fructose 6-phosphate metabolic process | 1.56E-04 |
| 22 | GO:0080093: regulation of photorespiration | 1.67E-04 |
| 23 | GO:0031998: regulation of fatty acid beta-oxidation | 1.67E-04 |
| 24 | GO:0000023: maltose metabolic process | 1.67E-04 |
| 25 | GO:0000025: maltose catabolic process | 1.67E-04 |
| 26 | GO:0043489: RNA stabilization | 1.67E-04 |
| 27 | GO:0044262: cellular carbohydrate metabolic process | 1.67E-04 |
| 28 | GO:0010206: photosystem II repair | 1.91E-04 |
| 29 | GO:0042742: defense response to bacterium | 2.33E-04 |
| 30 | GO:0009817: defense response to fungus, incompatible interaction | 3.00E-04 |
| 31 | GO:0018298: protein-chromophore linkage | 3.00E-04 |
| 32 | GO:0005983: starch catabolic process | 3.60E-04 |
| 33 | GO:0010270: photosystem II oxygen evolving complex assembly | 3.78E-04 |
| 34 | GO:0019388: galactose catabolic process | 3.78E-04 |
| 35 | GO:0005976: polysaccharide metabolic process | 3.78E-04 |
| 36 | GO:0006094: gluconeogenesis | 4.10E-04 |
| 37 | GO:0005986: sucrose biosynthetic process | 4.10E-04 |
| 38 | GO:0016050: vesicle organization | 6.19E-04 |
| 39 | GO:0006518: peptide metabolic process | 6.19E-04 |
| 40 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.83E-04 |
| 41 | GO:0006241: CTP biosynthetic process | 8.83E-04 |
| 42 | GO:0006165: nucleoside diphosphate phosphorylation | 8.83E-04 |
| 43 | GO:0006228: UTP biosynthetic process | 8.83E-04 |
| 44 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 8.83E-04 |
| 45 | GO:0010731: protein glutathionylation | 8.83E-04 |
| 46 | GO:0009590: detection of gravity | 8.83E-04 |
| 47 | GO:0015976: carbon utilization | 1.17E-03 |
| 48 | GO:0009765: photosynthesis, light harvesting | 1.17E-03 |
| 49 | GO:0006109: regulation of carbohydrate metabolic process | 1.17E-03 |
| 50 | GO:0006183: GTP biosynthetic process | 1.17E-03 |
| 51 | GO:0045727: positive regulation of translation | 1.17E-03 |
| 52 | GO:2000122: negative regulation of stomatal complex development | 1.17E-03 |
| 53 | GO:0006546: glycine catabolic process | 1.17E-03 |
| 54 | GO:0010021: amylopectin biosynthetic process | 1.17E-03 |
| 55 | GO:0010037: response to carbon dioxide | 1.17E-03 |
| 56 | GO:0045454: cell redox homeostasis | 1.43E-03 |
| 57 | GO:0006097: glyoxylate cycle | 1.48E-03 |
| 58 | GO:0006461: protein complex assembly | 1.48E-03 |
| 59 | GO:0006544: glycine metabolic process | 1.48E-03 |
| 60 | GO:0042549: photosystem II stabilization | 1.83E-03 |
| 61 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.83E-03 |
| 62 | GO:0000470: maturation of LSU-rRNA | 1.83E-03 |
| 63 | GO:0006828: manganese ion transport | 1.83E-03 |
| 64 | GO:0006563: L-serine metabolic process | 1.83E-03 |
| 65 | GO:0009955: adaxial/abaxial pattern specification | 2.19E-03 |
| 66 | GO:1901259: chloroplast rRNA processing | 2.19E-03 |
| 67 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.19E-03 |
| 68 | GO:0015995: chlorophyll biosynthetic process | 2.56E-03 |
| 69 | GO:0010196: nonphotochemical quenching | 2.58E-03 |
| 70 | GO:0009657: plastid organization | 3.41E-03 |
| 71 | GO:0009853: photorespiration | 3.58E-03 |
| 72 | GO:0034599: cellular response to oxidative stress | 3.75E-03 |
| 73 | GO:0006783: heme biosynthetic process | 3.86E-03 |
| 74 | GO:0035999: tetrahydrofolate interconversion | 4.33E-03 |
| 75 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.81E-03 |
| 76 | GO:0009644: response to high light intensity | 4.99E-03 |
| 77 | GO:0006816: calcium ion transport | 5.32E-03 |
| 78 | GO:0006415: translational termination | 5.32E-03 |
| 79 | GO:0043085: positive regulation of catalytic activity | 5.32E-03 |
| 80 | GO:0009750: response to fructose | 5.32E-03 |
| 81 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.32E-03 |
| 82 | GO:0006108: malate metabolic process | 6.38E-03 |
| 83 | GO:0006006: glucose metabolic process | 6.38E-03 |
| 84 | GO:0010020: chloroplast fission | 6.93E-03 |
| 85 | GO:0019253: reductive pentose-phosphate cycle | 6.93E-03 |
| 86 | GO:0010207: photosystem II assembly | 6.93E-03 |
| 87 | GO:0006810: transport | 7.24E-03 |
| 88 | GO:0005985: sucrose metabolic process | 7.50E-03 |
| 89 | GO:0000027: ribosomal large subunit assembly | 8.70E-03 |
| 90 | GO:0006289: nucleotide-excision repair | 8.70E-03 |
| 91 | GO:0006418: tRNA aminoacylation for protein translation | 9.33E-03 |
| 92 | GO:0016114: terpenoid biosynthetic process | 9.97E-03 |
| 93 | GO:0035428: hexose transmembrane transport | 1.06E-02 |
| 94 | GO:0009411: response to UV | 1.13E-02 |
| 95 | GO:0009790: embryo development | 1.30E-02 |
| 96 | GO:0000413: protein peptidyl-prolyl isomerization | 1.34E-02 |
| 97 | GO:0006979: response to oxidative stress | 1.38E-02 |
| 98 | GO:0046323: glucose import | 1.41E-02 |
| 99 | GO:0006662: glycerol ether metabolic process | 1.41E-02 |
| 100 | GO:0015986: ATP synthesis coupled proton transport | 1.49E-02 |
| 101 | GO:0007623: circadian rhythm | 1.53E-02 |
| 102 | GO:0000302: response to reactive oxygen species | 1.64E-02 |
| 103 | GO:0030163: protein catabolic process | 1.80E-02 |
| 104 | GO:0055114: oxidation-reduction process | 2.12E-02 |
| 105 | GO:0016311: dephosphorylation | 2.48E-02 |
| 106 | GO:0005975: carbohydrate metabolic process | 2.54E-02 |
| 107 | GO:0006508: proteolysis | 2.57E-02 |
| 108 | GO:0048481: plant ovule development | 2.57E-02 |
| 109 | GO:0046686: response to cadmium ion | 2.64E-02 |
| 110 | GO:0010218: response to far red light | 2.76E-02 |
| 111 | GO:0009631: cold acclimation | 2.85E-02 |
| 112 | GO:0010119: regulation of stomatal movement | 2.85E-02 |
| 113 | GO:0009637: response to blue light | 3.05E-02 |
| 114 | GO:0045087: innate immune response | 3.05E-02 |
| 115 | GO:0006099: tricarboxylic acid cycle | 3.14E-02 |
| 116 | GO:0042542: response to hydrogen peroxide | 3.55E-02 |
| 117 | GO:0010114: response to red light | 3.65E-02 |
| 118 | GO:0032259: methylation | 4.15E-02 |
| 119 | GO:0006364: rRNA processing | 4.51E-02 |
| 120 | GO:0009585: red, far-red light phototransduction | 4.51E-02 |
| 121 | GO:0009793: embryo development ending in seed dormancy | 4.69E-02 |
| 122 | GO:0008152: metabolic process | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 2 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 3 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 4 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 5 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 6 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 7 | GO:0019843: rRNA binding | 4.37E-21 |
| 8 | GO:0003735: structural constituent of ribosome | 2.28E-17 |
| 9 | GO:0008266: poly(U) RNA binding | 2.83E-07 |
| 10 | GO:0051920: peroxiredoxin activity | 7.29E-07 |
| 11 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.35E-06 |
| 12 | GO:0016209: antioxidant activity | 1.83E-06 |
| 13 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.16E-05 |
| 14 | GO:0016168: chlorophyll binding | 1.22E-05 |
| 15 | GO:0031409: pigment binding | 2.57E-05 |
| 16 | GO:0005528: FK506 binding | 3.04E-05 |
| 17 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.72E-05 |
| 18 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 1.67E-04 |
| 19 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.67E-04 |
| 20 | GO:0004853: uroporphyrinogen decarboxylase activity | 1.67E-04 |
| 21 | GO:0004856: xylulokinase activity | 1.67E-04 |
| 22 | GO:0004134: 4-alpha-glucanotransferase activity | 1.67E-04 |
| 23 | GO:0010297: heteropolysaccharide binding | 3.78E-04 |
| 24 | GO:0033201: alpha-1,4-glucan synthase activity | 3.78E-04 |
| 25 | GO:0004750: ribulose-phosphate 3-epimerase activity | 3.78E-04 |
| 26 | GO:0008967: phosphoglycolate phosphatase activity | 3.78E-04 |
| 27 | GO:0018708: thiol S-methyltransferase activity | 3.78E-04 |
| 28 | GO:0004614: phosphoglucomutase activity | 3.78E-04 |
| 29 | GO:0004324: ferredoxin-NADP+ reductase activity | 6.19E-04 |
| 30 | GO:0004373: glycogen (starch) synthase activity | 6.19E-04 |
| 31 | GO:0002161: aminoacyl-tRNA editing activity | 6.19E-04 |
| 32 | GO:0004148: dihydrolipoyl dehydrogenase activity | 6.19E-04 |
| 33 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 6.19E-04 |
| 34 | GO:0030267: glyoxylate reductase (NADP) activity | 6.19E-04 |
| 35 | GO:0004601: peroxidase activity | 7.91E-04 |
| 36 | GO:0016149: translation release factor activity, codon specific | 8.83E-04 |
| 37 | GO:0004550: nucleoside diphosphate kinase activity | 8.83E-04 |
| 38 | GO:0043023: ribosomal large subunit binding | 8.83E-04 |
| 39 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.17E-03 |
| 40 | GO:0009011: starch synthase activity | 1.17E-03 |
| 41 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 1.17E-03 |
| 42 | GO:0050662: coenzyme binding | 1.33E-03 |
| 43 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.48E-03 |
| 44 | GO:0004372: glycine hydroxymethyltransferase activity | 1.48E-03 |
| 45 | GO:0003959: NADPH dehydrogenase activity | 1.48E-03 |
| 46 | GO:0048038: quinone binding | 1.52E-03 |
| 47 | GO:2001070: starch binding | 1.83E-03 |
| 48 | GO:0004130: cytochrome-c peroxidase activity | 1.83E-03 |
| 49 | GO:0016615: malate dehydrogenase activity | 1.83E-03 |
| 50 | GO:0004252: serine-type endopeptidase activity | 1.92E-03 |
| 51 | GO:0030060: L-malate dehydrogenase activity | 2.19E-03 |
| 52 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.19E-03 |
| 53 | GO:0004602: glutathione peroxidase activity | 2.19E-03 |
| 54 | GO:0008236: serine-type peptidase activity | 2.70E-03 |
| 55 | GO:0004222: metalloendopeptidase activity | 3.12E-03 |
| 56 | GO:0015078: hydrogen ion transmembrane transporter activity | 3.41E-03 |
| 57 | GO:0003747: translation release factor activity | 3.86E-03 |
| 58 | GO:0005384: manganese ion transmembrane transporter activity | 4.33E-03 |
| 59 | GO:0008047: enzyme activator activity | 4.81E-03 |
| 60 | GO:0015386: potassium:proton antiporter activity | 5.32E-03 |
| 61 | GO:0000049: tRNA binding | 5.84E-03 |
| 62 | GO:0016491: oxidoreductase activity | 5.98E-03 |
| 63 | GO:0004089: carbonate dehydratase activity | 6.38E-03 |
| 64 | GO:0015095: magnesium ion transmembrane transporter activity | 6.38E-03 |
| 65 | GO:0031072: heat shock protein binding | 6.38E-03 |
| 66 | GO:0004857: enzyme inhibitor activity | 8.70E-03 |
| 67 | GO:0015079: potassium ion transmembrane transporter activity | 9.33E-03 |
| 68 | GO:0022891: substrate-specific transmembrane transporter activity | 1.13E-02 |
| 69 | GO:0047134: protein-disulfide reductase activity | 1.27E-02 |
| 70 | GO:0004812: aminoacyl-tRNA ligase activity | 1.27E-02 |
| 71 | GO:0004791: thioredoxin-disulfide reductase activity | 1.49E-02 |
| 72 | GO:0005355: glucose transmembrane transporter activity | 1.49E-02 |
| 73 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.80E-02 |
| 74 | GO:0008237: metallopeptidase activity | 1.96E-02 |
| 75 | GO:0008168: methyltransferase activity | 2.29E-02 |
| 76 | GO:0003729: mRNA binding | 2.47E-02 |
| 77 | GO:0004364: glutathione transferase activity | 3.55E-02 |
| 78 | GO:0005198: structural molecule activity | 3.96E-02 |
| 79 | GO:0005509: calcium ion binding | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 3 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 6.43E-87 |
| 5 | GO:0009941: chloroplast envelope | 1.20E-67 |
| 6 | GO:0009570: chloroplast stroma | 2.77E-60 |
| 7 | GO:0009534: chloroplast thylakoid | 1.62E-49 |
| 8 | GO:0009579: thylakoid | 6.12E-46 |
| 9 | GO:0009535: chloroplast thylakoid membrane | 2.42E-45 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 1.52E-17 |
| 11 | GO:0005840: ribosome | 2.00E-17 |
| 12 | GO:0031977: thylakoid lumen | 5.78E-13 |
| 13 | GO:0010319: stromule | 9.60E-13 |
| 14 | GO:0010287: plastoglobule | 1.13E-12 |
| 15 | GO:0030095: chloroplast photosystem II | 2.83E-07 |
| 16 | GO:0048046: apoplast | 6.77E-07 |
| 17 | GO:0016020: membrane | 1.09E-06 |
| 18 | GO:0009533: chloroplast stromal thylakoid | 1.19E-06 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.78E-06 |
| 20 | GO:0009523: photosystem II | 4.21E-06 |
| 21 | GO:0005960: glycine cleavage complex | 1.16E-05 |
| 22 | GO:0009706: chloroplast inner membrane | 1.28E-05 |
| 23 | GO:0009508: plastid chromosome | 1.43E-05 |
| 24 | GO:0030076: light-harvesting complex | 2.14E-05 |
| 25 | GO:0009654: photosystem II oxygen evolving complex | 3.58E-05 |
| 26 | GO:0009522: photosystem I | 1.00E-04 |
| 27 | GO:0019898: extrinsic component of membrane | 1.12E-04 |
| 28 | GO:0009538: photosystem I reaction center | 1.25E-04 |
| 29 | GO:0009782: photosystem I antenna complex | 1.67E-04 |
| 30 | GO:0009295: nucleoid | 1.77E-04 |
| 31 | GO:0031969: chloroplast membrane | 1.85E-04 |
| 32 | GO:0000311: plastid large ribosomal subunit | 3.60E-04 |
| 33 | GO:0015934: large ribosomal subunit | 3.64E-04 |
| 34 | GO:0030093: chloroplast photosystem I | 3.78E-04 |
| 35 | GO:0009517: PSII associated light-harvesting complex II | 1.17E-03 |
| 36 | GO:0022625: cytosolic large ribosomal subunit | 1.17E-03 |
| 37 | GO:0009536: plastid | 1.44E-03 |
| 38 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 1.83E-03 |
| 39 | GO:0009840: chloroplastic endopeptidase Clp complex | 2.19E-03 |
| 40 | GO:0009501: amyloplast | 2.99E-03 |
| 41 | GO:0005763: mitochondrial small ribosomal subunit | 3.86E-03 |
| 42 | GO:0042644: chloroplast nucleoid | 3.86E-03 |
| 43 | GO:0000312: plastid small ribosomal subunit | 6.93E-03 |
| 44 | GO:0042651: thylakoid membrane | 9.33E-03 |
| 45 | GO:0015935: small ribosomal subunit | 9.97E-03 |
| 46 | GO:0009532: plastid stroma | 9.97E-03 |
| 47 | GO:0022626: cytosolic ribosome | 1.86E-02 |
| 48 | GO:0030529: intracellular ribonucleoprotein complex | 2.13E-02 |