GO Enrichment Analysis of Co-expressed Genes with
AT4G02920
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017038: protein import | 0.00E+00 |
| 2 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 3 | GO:0015979: photosynthesis | 2.64E-07 |
| 4 | GO:0006021: inositol biosynthetic process | 5.76E-07 |
| 5 | GO:0015995: chlorophyll biosynthetic process | 3.26E-06 |
| 6 | GO:0006790: sulfur compound metabolic process | 1.58E-05 |
| 7 | GO:0006094: gluconeogenesis | 1.86E-05 |
| 8 | GO:0046854: phosphatidylinositol phosphorylation | 2.49E-05 |
| 9 | GO:0097054: L-glutamate biosynthetic process | 5.10E-05 |
| 10 | GO:0006729: tetrahydrobiopterin biosynthetic process | 5.10E-05 |
| 11 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 5.10E-05 |
| 12 | GO:0090391: granum assembly | 9.05E-05 |
| 13 | GO:0010136: ureide catabolic process | 9.05E-05 |
| 14 | GO:0006000: fructose metabolic process | 9.05E-05 |
| 15 | GO:0006537: glutamate biosynthetic process | 1.36E-04 |
| 16 | GO:0006020: inositol metabolic process | 1.36E-04 |
| 17 | GO:0006145: purine nucleobase catabolic process | 1.36E-04 |
| 18 | GO:0010109: regulation of photosynthesis | 1.86E-04 |
| 19 | GO:0019676: ammonia assimilation cycle | 1.86E-04 |
| 20 | GO:0016123: xanthophyll biosynthetic process | 2.40E-04 |
| 21 | GO:0009408: response to heat | 2.75E-04 |
| 22 | GO:0050665: hydrogen peroxide biosynthetic process | 2.97E-04 |
| 23 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 2.97E-04 |
| 24 | GO:0046855: inositol phosphate dephosphorylation | 2.97E-04 |
| 25 | GO:0010114: response to red light | 3.07E-04 |
| 26 | GO:0009644: response to high light intensity | 3.32E-04 |
| 27 | GO:0010189: vitamin E biosynthetic process | 3.57E-04 |
| 28 | GO:0009854: oxidative photosynthetic carbon pathway | 3.57E-04 |
| 29 | GO:0009645: response to low light intensity stimulus | 4.19E-04 |
| 30 | GO:0010196: nonphotochemical quenching | 4.19E-04 |
| 31 | GO:0009769: photosynthesis, light harvesting in photosystem II | 4.19E-04 |
| 32 | GO:0006605: protein targeting | 4.84E-04 |
| 33 | GO:0009642: response to light intensity | 4.84E-04 |
| 34 | GO:0006002: fructose 6-phosphate metabolic process | 5.50E-04 |
| 35 | GO:0010206: photosystem II repair | 6.19E-04 |
| 36 | GO:0006098: pentose-phosphate shunt | 6.19E-04 |
| 37 | GO:0009688: abscisic acid biosynthetic process | 7.62E-04 |
| 38 | GO:0055114: oxidation-reduction process | 7.63E-04 |
| 39 | GO:0043085: positive regulation of catalytic activity | 8.37E-04 |
| 40 | GO:0009773: photosynthetic electron transport in photosystem I | 8.37E-04 |
| 41 | GO:0005986: sucrose biosynthetic process | 9.90E-04 |
| 42 | GO:0010207: photosystem II assembly | 1.07E-03 |
| 43 | GO:0019253: reductive pentose-phosphate cycle | 1.07E-03 |
| 44 | GO:0042742: defense response to bacterium | 1.37E-03 |
| 45 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.41E-03 |
| 46 | GO:0009269: response to desiccation | 1.50E-03 |
| 47 | GO:0006662: glycerol ether metabolic process | 2.08E-03 |
| 48 | GO:0010182: sugar mediated signaling pathway | 2.08E-03 |
| 49 | GO:0009646: response to absence of light | 2.18E-03 |
| 50 | GO:0019252: starch biosynthetic process | 2.29E-03 |
| 51 | GO:0008654: phospholipid biosynthetic process | 2.29E-03 |
| 52 | GO:0010090: trichome morphogenesis | 2.61E-03 |
| 53 | GO:0051607: defense response to virus | 2.95E-03 |
| 54 | GO:0010027: thylakoid membrane organization | 3.07E-03 |
| 55 | GO:0018298: protein-chromophore linkage | 3.68E-03 |
| 56 | GO:0010218: response to far red light | 3.93E-03 |
| 57 | GO:0016051: carbohydrate biosynthetic process | 4.32E-03 |
| 58 | GO:0009637: response to blue light | 4.32E-03 |
| 59 | GO:0009853: photorespiration | 4.32E-03 |
| 60 | GO:0034599: cellular response to oxidative stress | 4.45E-03 |
| 61 | GO:0009416: response to light stimulus | 4.70E-03 |
| 62 | GO:0042542: response to hydrogen peroxide | 4.99E-03 |
| 63 | GO:0009744: response to sucrose | 5.13E-03 |
| 64 | GO:0006096: glycolytic process | 7.08E-03 |
| 65 | GO:0016036: cellular response to phosphate starvation | 1.12E-02 |
| 66 | GO:0006413: translational initiation | 1.12E-02 |
| 67 | GO:0007623: circadian rhythm | 1.18E-02 |
| 68 | GO:0009658: chloroplast organization | 1.61E-02 |
| 69 | GO:0006970: response to osmotic stress | 1.70E-02 |
| 70 | GO:0080167: response to karrikin | 1.87E-02 |
| 71 | GO:0044550: secondary metabolite biosynthetic process | 1.99E-02 |
| 72 | GO:0045454: cell redox homeostasis | 2.13E-02 |
| 73 | GO:0006886: intracellular protein transport | 2.18E-02 |
| 74 | GO:0009793: embryo development ending in seed dormancy | 2.21E-02 |
| 75 | GO:0006629: lipid metabolic process | 2.47E-02 |
| 76 | GO:0009908: flower development | 3.47E-02 |
| 77 | GO:0009735: response to cytokinin | 3.49E-02 |
| 78 | GO:0006457: protein folding | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 2 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 3 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 4 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 5 | GO:0047652: allantoate deiminase activity | 0.00E+00 |
| 6 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 7 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.29E-06 |
| 8 | GO:0071949: FAD binding | 7.20E-06 |
| 9 | GO:0031072: heat shock protein binding | 1.86E-05 |
| 10 | GO:0016041: glutamate synthase (ferredoxin) activity | 1.97E-05 |
| 11 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 1.97E-05 |
| 12 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.97E-05 |
| 13 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.10E-05 |
| 14 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 5.10E-05 |
| 15 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.10E-05 |
| 16 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.10E-05 |
| 17 | GO:0004512: inositol-3-phosphate synthase activity | 5.10E-05 |
| 18 | GO:0046872: metal ion binding | 6.01E-05 |
| 19 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 9.05E-05 |
| 20 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.36E-04 |
| 21 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.36E-04 |
| 22 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.36E-04 |
| 23 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.36E-04 |
| 24 | GO:0016851: magnesium chelatase activity | 1.36E-04 |
| 25 | GO:0008891: glycolate oxidase activity | 1.86E-04 |
| 26 | GO:0051538: 3 iron, 4 sulfur cluster binding | 2.40E-04 |
| 27 | GO:0004332: fructose-bisphosphate aldolase activity | 2.97E-04 |
| 28 | GO:0042578: phosphoric ester hydrolase activity | 2.97E-04 |
| 29 | GO:0051082: unfolded protein binding | 5.81E-04 |
| 30 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 6.90E-04 |
| 31 | GO:0008047: enzyme activator activity | 7.62E-04 |
| 32 | GO:0031409: pigment binding | 1.23E-03 |
| 33 | GO:0003756: protein disulfide isomerase activity | 1.78E-03 |
| 34 | GO:0047134: protein-disulfide reductase activity | 1.88E-03 |
| 35 | GO:0004791: thioredoxin-disulfide reductase activity | 2.18E-03 |
| 36 | GO:0010181: FMN binding | 2.18E-03 |
| 37 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.61E-03 |
| 38 | GO:0008237: metallopeptidase activity | 2.84E-03 |
| 39 | GO:0016168: chlorophyll binding | 3.19E-03 |
| 40 | GO:0016298: lipase activity | 6.46E-03 |
| 41 | GO:0016874: ligase activity | 7.72E-03 |
| 42 | GO:0015035: protein disulfide oxidoreductase activity | 8.22E-03 |
| 43 | GO:0016491: oxidoreductase activity | 1.25E-02 |
| 44 | GO:0042802: identical protein binding | 1.40E-02 |
| 45 | GO:0004497: monooxygenase activity | 1.87E-02 |
| 46 | GO:0005515: protein binding | 3.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.37E-17 |
| 2 | GO:0009570: chloroplast stroma | 6.96E-12 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.97E-11 |
| 4 | GO:0009941: chloroplast envelope | 2.93E-11 |
| 5 | GO:0009534: chloroplast thylakoid | 8.12E-11 |
| 6 | GO:0009579: thylakoid | 3.72E-06 |
| 7 | GO:0009515: granal stacked thylakoid | 1.97E-05 |
| 8 | GO:0010007: magnesium chelatase complex | 9.05E-05 |
| 9 | GO:0031969: chloroplast membrane | 1.62E-04 |
| 10 | GO:0009517: PSII associated light-harvesting complex II | 1.86E-04 |
| 11 | GO:0031977: thylakoid lumen | 2.83E-04 |
| 12 | GO:0010287: plastoglobule | 6.84E-04 |
| 13 | GO:0030076: light-harvesting complex | 1.15E-03 |
| 14 | GO:0048046: apoplast | 1.32E-03 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 1.41E-03 |
| 16 | GO:0009522: photosystem I | 2.18E-03 |
| 17 | GO:0009523: photosystem II | 2.29E-03 |
| 18 | GO:0019898: extrinsic component of membrane | 2.29E-03 |
| 19 | GO:0022626: cytosolic ribosome | 4.50E-03 |
| 20 | GO:0009706: chloroplast inner membrane | 8.05E-03 |
| 21 | GO:0009543: chloroplast thylakoid lumen | 9.42E-03 |
| 22 | GO:0005623: cell | 9.60E-03 |
| 23 | GO:0005759: mitochondrial matrix | 1.11E-02 |
| 24 | GO:0016020: membrane | 2.56E-02 |
| 25 | GO:0005777: peroxisome | 4.11E-02 |