co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G02230

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006412: translation	4.11E-109
2	GO:0042254: ribosome biogenesis	6.07E-36
3	GO:0000027: ribosomal large subunit assembly	3.13E-11
4	GO:0000028: ribosomal small subunit assembly	1.10E-06
5	GO:1902626: assembly of large subunit precursor of preribosome	3.44E-06
6	GO:0009955: adaxial/abaxial pattern specification	5.23E-05
7	GO:0018002: N-terminal peptidyl-glutamic acid acetylation	1.35E-04
8	GO:0006407: rRNA export from nucleus	1.35E-04
9	GO:0006475: internal protein amino acid acetylation	1.35E-04
10	GO:0015801: aromatic amino acid transport	1.35E-04
11	GO:0017198: N-terminal peptidyl-serine acetylation	1.35E-04
12	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.35E-04
13	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.35E-04
14	GO:0000387: spliceosomal snRNP assembly	1.69E-04
15	GO:0006626: protein targeting to mitochondrion	3.08E-04
16	GO:0009965: leaf morphogenesis	4.56E-04
17	GO:0002181: cytoplasmic translation	5.13E-04
18	GO:0034227: tRNA thio-modification	5.13E-04
19	GO:0042256: mature ribosome assembly	5.13E-04
20	GO:0045040: protein import into mitochondrial outer membrane	1.51E-03
21	GO:0000911: cytokinesis by cell plate formation	1.81E-03
22	GO:0009735: response to cytokinin	2.63E-03
23	GO:0009245: lipid A biosynthetic process	3.17E-03
24	GO:0008283: cell proliferation	3.47E-03
25	GO:0010015: root morphogenesis	4.36E-03
26	GO:0006913: nucleocytoplasmic transport	4.36E-03
27	GO:0010102: lateral root morphogenesis	5.22E-03
28	GO:0006414: translational elongation	5.54E-03
29	GO:0006446: regulation of translational initiation	5.68E-03
30	GO:0048467: gynoecium development	5.68E-03
31	GO:0030150: protein import into mitochondrial matrix	7.11E-03
32	GO:0000398: mRNA splicing, via spliceosome	7.64E-03
33	GO:0003333: amino acid transmembrane transport	8.14E-03
34	GO:0007005: mitochondrion organization	8.67E-03
35	GO:0009793: embryo development ending in seed dormancy	9.60E-03
36	GO:0006413: translational initiation	1.07E-02
37	GO:0010090: trichome morphogenesis	1.46E-02
38	GO:0009651: response to salt stress	1.82E-02
39	GO:0006865: amino acid transport	2.40E-02
40	GO:0009620: response to fungus	4.42E-02
41	GO:0015031: protein transport	4.44E-02

Rank	GO Term	Adjusted P value
1	GO:0003735: structural constituent of ribosome	5.44E-138
2	GO:0003729: mRNA binding	3.99E-30
3	GO:0019843: rRNA binding	1.83E-08
4	GO:0008097: 5S rRNA binding	8.07E-06
5	GO:1990189: peptide-serine-N-acetyltransferase activity	1.35E-04
6	GO:1990190: peptide-glutamate-N-acetyltransferase activity	1.35E-04
7	GO:0015173: aromatic amino acid transmembrane transporter activity	3.11E-04
8	GO:0070181: small ribosomal subunit rRNA binding	5.13E-04
9	GO:0005275: amine transmembrane transporter activity	1.23E-03
10	GO:0031177: phosphopantetheine binding	1.51E-03
11	GO:0000035: acyl binding	1.81E-03
12	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.14E-03
13	GO:0043022: ribosome binding	2.46E-03
14	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.46E-03
15	GO:0044183: protein binding involved in protein folding	4.36E-03
16	GO:0015266: protein channel activity	5.22E-03
17	GO:0008080: N-acetyltransferase activity	1.15E-02
18	GO:0003743: translation initiation factor activity	1.34E-02
19	GO:0050897: cobalt ion binding	2.32E-02
20	GO:0003723: RNA binding	2.97E-02
21	GO:0051082: unfolded protein binding	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0043186: P granule	0.00E+00
2	GO:0005840: ribosome	1.84E-89
3	GO:0022626: cytosolic ribosome	4.06E-86
4	GO:0022625: cytosolic large ribosomal subunit	1.62E-77
5	GO:0022627: cytosolic small ribosomal subunit	4.40E-56
6	GO:0005737: cytoplasm	8.47E-36
7	GO:0005730: nucleolus	1.60E-23
8	GO:0005829: cytosol	9.58E-21
9	GO:0009506: plasmodesma	8.21E-17
10	GO:0016020: membrane	3.31E-13
11	GO:0015934: large ribosomal subunit	1.01E-08
12	GO:0005774: vacuolar membrane	1.05E-08
13	GO:0005618: cell wall	2.05E-07
14	GO:0015935: small ribosomal subunit	5.15E-07
15	GO:0005773: vacuole	3.56E-05
16	GO:0005742: mitochondrial outer membrane translocase complex	1.14E-04
17	GO:0005732: small nucleolar ribonucleoprotein complex	1.16E-04
18	GO:0030686: 90S preribosome	1.35E-04
19	GO:0071011: precatalytic spliceosome	1.69E-04
20	GO:0071013: catalytic step 2 spliceosome	2.34E-04
21	GO:0019013: viral nucleocapsid	3.08E-04
22	GO:0031415: NatA complex	3.11E-04
23	GO:0034719: SMN-Sm protein complex	5.13E-04
24	GO:1990726: Lsm1-7-Pat1 complex	7.34E-04
25	GO:0005682: U5 snRNP	9.73E-04
26	GO:0005687: U4 snRNP	1.23E-03
27	GO:0097526: spliceosomal tri-snRNP complex	1.23E-03
28	GO:0005886: plasma membrane	1.27E-03
29	GO:0005689: U12-type spliceosomal complex	1.81E-03
30	GO:0016272: prefoldin complex	1.81E-03
31	GO:0071004: U2-type prespliceosome	2.46E-03
32	GO:0005688: U6 snRNP	2.46E-03
33	GO:0046540: U4/U6 x U5 tri-snRNP complex	2.81E-03
34	GO:0005685: U1 snRNP	3.17E-03
35	GO:0005686: U2 snRNP	3.95E-03
36	GO:0005852: eukaryotic translation initiation factor 3 complex	4.36E-03
37	GO:0031307: integral component of mitochondrial outer membrane	4.79E-03
38	GO:0005681: spliceosomal complex	5.50E-03
39	GO:0005758: mitochondrial intermembrane space	7.11E-03
40	GO:0070469: respiratory chain	7.62E-03
41	GO:0000932: P-body	1.73E-02
42	GO:0009507: chloroplast	3.16E-02
43	GO:0009706: chloroplast inner membrane	4.71E-02