GO Enrichment Analysis of Co-expressed Genes with
AT4G02120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 2 | GO:1900088: regulation of inositol biosynthetic process | 0.00E+00 |
| 3 | GO:1900091: regulation of raffinose biosynthetic process | 0.00E+00 |
| 4 | GO:0009661: chromoplast organization | 0.00E+00 |
| 5 | GO:0006285: base-excision repair, AP site formation | 4.04E-05 |
| 6 | GO:0071461: cellular response to redox state | 4.04E-05 |
| 7 | GO:0032956: regulation of actin cytoskeleton organization | 4.04E-05 |
| 8 | GO:0048438: floral whorl development | 4.04E-05 |
| 9 | GO:2000030: regulation of response to red or far red light | 1.00E-04 |
| 10 | GO:0080005: photosystem stoichiometry adjustment | 1.00E-04 |
| 11 | GO:0019388: galactose catabolic process | 1.00E-04 |
| 12 | GO:0010220: positive regulation of vernalization response | 1.00E-04 |
| 13 | GO:0048571: long-day photoperiodism | 1.00E-04 |
| 14 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.00E-04 |
| 15 | GO:0080183: response to photooxidative stress | 1.00E-04 |
| 16 | GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion | 1.73E-04 |
| 17 | GO:0006013: mannose metabolic process | 1.73E-04 |
| 18 | GO:1901562: response to paraquat | 1.73E-04 |
| 19 | GO:0031929: TOR signaling | 1.73E-04 |
| 20 | GO:0010351: lithium ion transport | 1.73E-04 |
| 21 | GO:0009963: positive regulation of flavonoid biosynthetic process | 2.55E-04 |
| 22 | GO:0009647: skotomorphogenesis | 2.55E-04 |
| 23 | GO:0009590: detection of gravity | 2.55E-04 |
| 24 | GO:2001141: regulation of RNA biosynthetic process | 2.55E-04 |
| 25 | GO:0009649: entrainment of circadian clock | 3.43E-04 |
| 26 | GO:0016120: carotene biosynthetic process | 4.37E-04 |
| 27 | GO:0098719: sodium ion import across plasma membrane | 4.37E-04 |
| 28 | GO:0046283: anthocyanin-containing compound metabolic process | 4.37E-04 |
| 29 | GO:0000060: protein import into nucleus, translocation | 5.37E-04 |
| 30 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 5.37E-04 |
| 31 | GO:0010077: maintenance of inflorescence meristem identity | 6.40E-04 |
| 32 | GO:0010076: maintenance of floral meristem identity | 6.40E-04 |
| 33 | GO:0009396: folic acid-containing compound biosynthetic process | 7.49E-04 |
| 34 | GO:0050790: regulation of catalytic activity | 7.49E-04 |
| 35 | GO:0005978: glycogen biosynthetic process | 8.61E-04 |
| 36 | GO:0030091: protein repair | 8.61E-04 |
| 37 | GO:0050821: protein stabilization | 8.61E-04 |
| 38 | GO:0009231: riboflavin biosynthetic process | 8.61E-04 |
| 39 | GO:0006102: isocitrate metabolic process | 8.61E-04 |
| 40 | GO:0006508: proteolysis | 9.08E-04 |
| 41 | GO:0071482: cellular response to light stimulus | 9.77E-04 |
| 42 | GO:0015996: chlorophyll catabolic process | 9.77E-04 |
| 43 | GO:0035999: tetrahydrofolate interconversion | 1.22E-03 |
| 44 | GO:0051453: regulation of intracellular pH | 1.22E-03 |
| 45 | GO:0009641: shade avoidance | 1.35E-03 |
| 46 | GO:0006879: cellular iron ion homeostasis | 1.49E-03 |
| 47 | GO:0006352: DNA-templated transcription, initiation | 1.49E-03 |
| 48 | GO:0048229: gametophyte development | 1.49E-03 |
| 49 | GO:0010582: floral meristem determinacy | 1.63E-03 |
| 50 | GO:0006006: glucose metabolic process | 1.77E-03 |
| 51 | GO:0009058: biosynthetic process | 1.79E-03 |
| 52 | GO:0009739: response to gibberellin | 2.60E-03 |
| 53 | GO:0016226: iron-sulfur cluster assembly | 2.89E-03 |
| 54 | GO:0006284: base-excision repair | 3.24E-03 |
| 55 | GO:0042391: regulation of membrane potential | 3.61E-03 |
| 56 | GO:0006520: cellular amino acid metabolic process | 3.80E-03 |
| 57 | GO:0006814: sodium ion transport | 3.99E-03 |
| 58 | GO:0019252: starch biosynthetic process | 4.19E-03 |
| 59 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 4.38E-03 |
| 60 | GO:0006464: cellular protein modification process | 5.00E-03 |
| 61 | GO:0071805: potassium ion transmembrane transport | 5.21E-03 |
| 62 | GO:0055114: oxidation-reduction process | 6.11E-03 |
| 63 | GO:0048573: photoperiodism, flowering | 6.31E-03 |
| 64 | GO:0009407: toxin catabolic process | 7.25E-03 |
| 65 | GO:0010119: regulation of stomatal movement | 7.49E-03 |
| 66 | GO:0007568: aging | 7.49E-03 |
| 67 | GO:0046686: response to cadmium ion | 7.55E-03 |
| 68 | GO:0009853: photorespiration | 7.99E-03 |
| 69 | GO:0006099: tricarboxylic acid cycle | 8.24E-03 |
| 70 | GO:0009640: photomorphogenesis | 9.53E-03 |
| 71 | GO:0000165: MAPK cascade | 1.09E-02 |
| 72 | GO:0009585: red, far-red light phototransduction | 1.18E-02 |
| 73 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.20E-02 |
| 74 | GO:0010224: response to UV-B | 1.20E-02 |
| 75 | GO:0009620: response to fungus | 1.41E-02 |
| 76 | GO:0009617: response to bacterium | 2.52E-02 |
| 77 | GO:0030154: cell differentiation | 2.56E-02 |
| 78 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 2.87E-02 |
| 79 | GO:0009723: response to ethylene | 3.37E-02 |
| 80 | GO:0080167: response to karrikin | 3.54E-02 |
| 81 | GO:0010200: response to chitin | 3.63E-02 |
| 82 | GO:0009751: response to salicylic acid | 4.62E-02 |
| 83 | GO:0006281: DNA repair | 4.67E-02 |
| 84 | GO:0009408: response to heat | 4.67E-02 |
| 85 | GO:0009753: response to jasmonic acid | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047504: (-)-menthol dehydrogenase activity | 0.00E+00 |
| 2 | GO:0047501: (+)-neomenthol dehydrogenase activity | 0.00E+00 |
| 3 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 4 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 4.04E-05 |
| 5 | GO:0016783: sulfurtransferase activity | 4.04E-05 |
| 6 | GO:0000703: oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity | 4.04E-05 |
| 7 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 4.04E-05 |
| 8 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 1.00E-04 |
| 9 | GO:0004614: phosphoglucomutase activity | 1.00E-04 |
| 10 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 1.00E-04 |
| 11 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.00E-04 |
| 12 | GO:0004180: carboxypeptidase activity | 1.73E-04 |
| 13 | GO:0004557: alpha-galactosidase activity | 1.73E-04 |
| 14 | GO:0003935: GTP cyclohydrolase II activity | 1.73E-04 |
| 15 | GO:0008106: alcohol dehydrogenase (NADP+) activity | 2.55E-04 |
| 16 | GO:0004792: thiosulfate sulfurtransferase activity | 2.55E-04 |
| 17 | GO:0001053: plastid sigma factor activity | 3.43E-04 |
| 18 | GO:0019104: DNA N-glycosylase activity | 3.43E-04 |
| 19 | GO:0016987: sigma factor activity | 3.43E-04 |
| 20 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 5.37E-04 |
| 21 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 5.37E-04 |
| 22 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 5.37E-04 |
| 23 | GO:0015081: sodium ion transmembrane transporter activity | 5.37E-04 |
| 24 | GO:0005261: cation channel activity | 6.40E-04 |
| 25 | GO:0004559: alpha-mannosidase activity | 6.40E-04 |
| 26 | GO:0071949: FAD binding | 1.10E-03 |
| 27 | GO:0016491: oxidoreductase activity | 1.14E-03 |
| 28 | GO:0015386: potassium:proton antiporter activity | 1.49E-03 |
| 29 | GO:0030552: cAMP binding | 2.07E-03 |
| 30 | GO:0030553: cGMP binding | 2.07E-03 |
| 31 | GO:0005216: ion channel activity | 2.55E-03 |
| 32 | GO:0004176: ATP-dependent peptidase activity | 2.72E-03 |
| 33 | GO:0000287: magnesium ion binding | 3.50E-03 |
| 34 | GO:0030551: cyclic nucleotide binding | 3.61E-03 |
| 35 | GO:0005249: voltage-gated potassium channel activity | 3.61E-03 |
| 36 | GO:0008233: peptidase activity | 4.34E-03 |
| 37 | GO:0004197: cysteine-type endopeptidase activity | 4.58E-03 |
| 38 | GO:0015385: sodium:proton antiporter activity | 4.79E-03 |
| 39 | GO:0008237: metallopeptidase activity | 5.21E-03 |
| 40 | GO:0008236: serine-type peptidase activity | 6.54E-03 |
| 41 | GO:0004222: metalloendopeptidase activity | 7.25E-03 |
| 42 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 7.99E-03 |
| 43 | GO:0004364: glutathione transferase activity | 9.27E-03 |
| 44 | GO:0016887: ATPase activity | 1.01E-02 |
| 45 | GO:0051287: NAD binding | 1.09E-02 |
| 46 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.18E-02 |
| 47 | GO:0008234: cysteine-type peptidase activity | 1.26E-02 |
| 48 | GO:0051082: unfolded protein binding | 1.51E-02 |
| 49 | GO:0030170: pyridoxal phosphate binding | 1.91E-02 |
| 50 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.94E-02 |
| 51 | GO:0003824: catalytic activity | 2.58E-02 |
| 52 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.64E-02 |
| 53 | GO:0042802: identical protein binding | 2.64E-02 |
| 54 | GO:0046982: protein heterodimerization activity | 2.99E-02 |
| 55 | GO:0004601: peroxidase activity | 3.04E-02 |
| 56 | GO:0043565: sequence-specific DNA binding | 3.38E-02 |
| 57 | GO:0004672: protein kinase activity | 3.45E-02 |
| 58 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 4.02E-02 |
| 59 | GO:0042803: protein homodimerization activity | 4.16E-02 |
| 60 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 4.34E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000152: nuclear ubiquitin ligase complex | 4.04E-05 |
| 2 | GO:0031932: TORC2 complex | 4.04E-05 |
| 3 | GO:0031931: TORC1 complex | 1.73E-04 |
| 4 | GO:0010319: stromule | 3.14E-04 |
| 5 | GO:0009507: chloroplast | 6.20E-04 |
| 6 | GO:0009501: amyloplast | 8.61E-04 |
| 7 | GO:0009536: plastid | 1.03E-03 |
| 8 | GO:0042644: chloroplast nucleoid | 1.10E-03 |
| 9 | GO:0016604: nuclear body | 1.22E-03 |
| 10 | GO:0005764: lysosome | 1.92E-03 |
| 11 | GO:0005759: mitochondrial matrix | 2.12E-03 |
| 12 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.91E-03 |
| 13 | GO:0031969: chloroplast membrane | 4.42E-03 |
| 14 | GO:0032580: Golgi cisterna membrane | 5.00E-03 |
| 15 | GO:0005739: mitochondrion | 8.22E-03 |
| 16 | GO:0005773: vacuole | 9.42E-03 |
| 17 | GO:0005777: peroxisome | 1.33E-02 |
| 18 | GO:0010008: endosome membrane | 1.35E-02 |
| 19 | GO:0005747: mitochondrial respiratory chain complex I | 1.35E-02 |
| 20 | GO:0010287: plastoglobule | 1.70E-02 |
| 21 | GO:0005737: cytoplasm | 1.90E-02 |
| 22 | GO:0005768: endosome | 2.11E-02 |
| 23 | GO:0005615: extracellular space | 2.41E-02 |
| 24 | GO:0009941: chloroplast envelope | 3.05E-02 |
| 25 | GO:0005743: mitochondrial inner membrane | 4.43E-02 |
| 26 | GO:0009570: chloroplast stroma | 4.59E-02 |