Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G01660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090352: regulation of nitrate assimilation0.00E+00
2GO:0010247: detection of phosphate ion0.00E+00
3GO:0019481: L-alanine catabolic process, by transamination0.00E+00
4GO:0051131: chaperone-mediated protein complex assembly2.94E-07
5GO:0009408: response to heat5.25E-07
6GO:0006457: protein folding4.55E-06
7GO:0018920: glyphosate metabolic process1.97E-05
8GO:0099636: cytoplasmic streaming1.97E-05
9GO:0010113: negative regulation of systemic acquired resistance1.97E-05
10GO:0051014: actin filament severing1.97E-05
11GO:0071277: cellular response to calcium ion1.97E-05
12GO:0010155: regulation of proton transport5.10E-05
13GO:0010165: response to X-ray9.05E-05
14GO:0010286: heat acclimation1.23E-04
15GO:0051764: actin crosslink formation1.86E-04
16GO:0043484: regulation of RNA splicing2.40E-04
17GO:0010337: regulation of salicylic acid metabolic process2.97E-04
18GO:0009423: chorismate biosynthetic process3.57E-04
19GO:0006486: protein glycosylation4.13E-04
20GO:0006744: ubiquinone biosynthetic process4.19E-04
21GO:0051693: actin filament capping4.19E-04
22GO:2000070: regulation of response to water deprivation4.84E-04
23GO:0050821: protein stabilization4.84E-04
24GO:0009787: regulation of abscisic acid-activated signaling pathway4.84E-04
25GO:0006491: N-glycan processing4.84E-04
26GO:0009808: lignin metabolic process5.50E-04
27GO:0009699: phenylpropanoid biosynthetic process5.50E-04
28GO:0048589: developmental growth6.19E-04
29GO:0007062: sister chromatid cohesion6.19E-04
30GO:0090332: stomatal closure6.90E-04
31GO:0030042: actin filament depolymerization6.90E-04
32GO:0009870: defense response signaling pathway, resistance gene-dependent7.62E-04
33GO:0009073: aromatic amino acid family biosynthetic process8.37E-04
34GO:0009698: phenylpropanoid metabolic process8.37E-04
35GO:0016925: protein sumoylation9.12E-04
36GO:0050826: response to freezing9.90E-04
37GO:0007015: actin filament organization1.07E-03
38GO:0006302: double-strand break repair1.07E-03
39GO:0051017: actin filament bundle assembly1.32E-03
40GO:0006487: protein N-linked glycosylation1.32E-03
41GO:0007010: cytoskeleton organization1.32E-03
42GO:0010187: negative regulation of seed germination1.32E-03
43GO:0003333: amino acid transmembrane transport1.50E-03
44GO:0061077: chaperone-mediated protein folding1.50E-03
45GO:0040007: growth1.68E-03
46GO:0080167: response to karrikin1.82E-03
47GO:0006606: protein import into nucleus1.98E-03
48GO:0010197: polar nucleus fusion2.08E-03
49GO:0048868: pollen tube development2.08E-03
50GO:0007059: chromosome segregation2.18E-03
51GO:0010183: pollen tube guidance2.29E-03
52GO:0046686: response to cadmium ion2.39E-03
53GO:0032502: developmental process2.50E-03
54GO:0016579: protein deubiquitination2.95E-03
55GO:0001666: response to hypoxia3.07E-03
56GO:0009615: response to virus3.07E-03
57GO:0009816: defense response to bacterium, incompatible interaction3.19E-03
58GO:0016049: cell growth3.55E-03
59GO:0048481: plant ovule development3.68E-03
60GO:0048767: root hair elongation3.80E-03
61GO:0009910: negative regulation of flower development4.06E-03
62GO:0000724: double-strand break repair via homologous recombination4.19E-03
63GO:0006865: amino acid transport4.19E-03
64GO:0045087: innate immune response4.32E-03
65GO:0009553: embryo sac development7.89E-03
66GO:0006396: RNA processing8.22E-03
67GO:0009414: response to water deprivation9.28E-03
68GO:0016036: cellular response to phosphate starvation1.12E-02
69GO:0040008: regulation of growth1.14E-02
70GO:0006810: transport1.40E-02
71GO:0048366: leaf development1.81E-02
72GO:0016192: vesicle-mediated transport1.94E-02
73GO:0006886: intracellular protein transport2.18E-02
74GO:0048364: root development2.55E-02
75GO:0009908: flower development3.47E-02
76GO:0009416: response to light stimulus3.72E-02
77GO:0009555: pollen development3.72E-02
78GO:0009611: response to wounding3.78E-02
79GO:0051301: cell division3.96E-02
80GO:0006511: ubiquitin-dependent protein catabolic process4.63E-02
RankGO TermAdjusted P value
1GO:0016710: trans-cinnamate 4-monooxygenase activity0.00E+00
2GO:0047734: CDP-glycerol diphosphatase activity0.00E+00
3GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity1.97E-05
4GO:0051082: unfolded protein binding2.66E-05
5GO:1990585: hydroxyproline O-arabinosyltransferase activity5.10E-05
6GO:0019789: SUMO transferase activity1.36E-04
7GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity1.36E-04
8GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.36E-04
9GO:0047631: ADP-ribose diphosphatase activity2.40E-04
10GO:0002020: protease binding2.40E-04
11GO:0004559: alpha-mannosidase activity3.57E-04
12GO:0004012: phospholipid-translocating ATPase activity3.57E-04
13GO:0005524: ATP binding6.90E-04
14GO:0008565: protein transporter activity8.55E-04
15GO:0008378: galactosyltransferase activity9.12E-04
16GO:0008139: nuclear localization sequence binding9.90E-04
17GO:0031072: heat shock protein binding9.90E-04
18GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism9.90E-04
19GO:0016757: transferase activity, transferring glycosyl groups1.19E-03
20GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.50E-03
21GO:0030276: clathrin binding2.08E-03
22GO:0008536: Ran GTPase binding2.08E-03
23GO:0004843: thiol-dependent ubiquitin-specific protease activity2.40E-03
24GO:0051015: actin filament binding2.61E-03
25GO:0005515: protein binding4.41E-03
26GO:0015171: amino acid transmembrane transporter activity6.76E-03
27GO:0016874: ligase activity7.72E-03
28GO:0003779: actin binding7.89E-03
29GO:0016758: transferase activity, transferring hexosyl groups9.24E-03
30GO:0042802: identical protein binding1.40E-02
31GO:0003729: mRNA binding1.42E-02
32GO:0000287: magnesium ion binding1.59E-02
33GO:0004871: signal transducer activity2.20E-02
34GO:0004722: protein serine/threonine phosphatase activity2.28E-02
35GO:0016887: ATPase activity3.38E-02
36GO:0005516: calmodulin binding4.98E-02
RankGO TermAdjusted P value
1GO:0005794: Golgi apparatus3.11E-08
2GO:0009506: plasmodesma1.02E-04
3GO:0005802: trans-Golgi network1.19E-04
4GO:0005768: endosome1.48E-04
5GO:0030915: Smc5-Smc6 complex2.40E-04
6GO:0016363: nuclear matrix3.57E-04
7GO:0030131: clathrin adaptor complex4.84E-04
8GO:0030665: clathrin-coated vesicle membrane6.90E-04
9GO:0005886: plasma membrane8.15E-04
10GO:0005884: actin filament8.37E-04
11GO:0000139: Golgi membrane2.00E-03
12GO:0031965: nuclear membrane2.29E-03
13GO:0005789: endoplasmic reticulum membrane2.33E-03
14GO:0031902: late endosome membrane4.86E-03
15GO:0005856: cytoskeleton5.56E-03
16GO:0016607: nuclear speck7.24E-03
17GO:0010008: endosome membrane7.24E-03
18GO:0005834: heterotrimeric G-protein complex7.40E-03
19GO:0005623: cell9.60E-03
20GO:0005829: cytosol1.01E-02
21GO:0005783: endoplasmic reticulum1.60E-02
22GO:0016020: membrane2.56E-02
23GO:0016021: integral component of membrane2.64E-02
24GO:0005737: cytoplasm2.88E-02
25GO:0005774: vacuolar membrane3.31E-02
26GO:0022626: cytosolic ribosome3.61E-02
27GO:0005618: cell wall3.78E-02
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Gene type



Gene DE type