co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G01130

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048512: circadian behavior	0.00E+00
2	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
3	GO:0030155: regulation of cell adhesion	0.00E+00
4	GO:0000025: maltose catabolic process	0.00E+00
5	GO:0005980: glycogen catabolic process	0.00E+00
6	GO:0090279: regulation of calcium ion import	0.00E+00
7	GO:0080127: fruit septum development	0.00E+00
8	GO:0015717: triose phosphate transport	0.00E+00
9	GO:0071474: cellular hyperosmotic response	0.00E+00
10	GO:0005983: starch catabolic process	1.74E-07
11	GO:0000023: maltose metabolic process	1.73E-04
12	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	1.73E-04
13	GO:0048507: meristem development	2.02E-04
14	GO:0005982: starch metabolic process	2.41E-04
15	GO:0015979: photosynthesis	2.66E-04
16	GO:0009773: photosynthetic electron transport in photosystem I	3.31E-04
17	GO:0030388: fructose 1,6-bisphosphate metabolic process	3.92E-04
18	GO:0051262: protein tetramerization	3.92E-04
19	GO:0005976: polysaccharide metabolic process	3.92E-04
20	GO:0031648: protein destabilization	3.92E-04
21	GO:0006094: gluconeogenesis	4.32E-04
22	GO:0009266: response to temperature stimulus	4.87E-04
23	GO:0048281: inflorescence morphogenesis	6.40E-04
24	GO:0006000: fructose metabolic process	6.40E-04
25	GO:0009405: pathogenesis	6.40E-04
26	GO:0035436: triose phosphate transmembrane transport	6.40E-04
27	GO:0010017: red or far-red light signaling pathway	8.83E-04
28	GO:0010239: chloroplast mRNA processing	9.13E-04
29	GO:0010148: transpiration	9.13E-04
30	GO:0010306: rhamnogalacturonan II biosynthetic process	9.13E-04
31	GO:0010731: protein glutathionylation	9.13E-04
32	GO:0010321: regulation of vegetative phase change	9.13E-04
33	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	9.13E-04
34	GO:1902358: sulfate transmembrane transport	9.13E-04
35	GO:0010023: proanthocyanidin biosynthetic process	1.21E-03
36	GO:0006109: regulation of carbohydrate metabolic process	1.21E-03
37	GO:0022622: root system development	1.21E-03
38	GO:0010600: regulation of auxin biosynthetic process	1.21E-03
39	GO:0006552: leucine catabolic process	1.21E-03
40	GO:0015713: phosphoglycerate transport	1.21E-03
41	GO:0010021: amylopectin biosynthetic process	1.21E-03
42	GO:0006465: signal peptide processing	1.54E-03
43	GO:0045454: cell redox homeostasis	1.55E-03
44	GO:1901657: glycosyl compound metabolic process	1.82E-03
45	GO:0003006: developmental process involved in reproduction	1.89E-03
46	GO:0009643: photosynthetic acclimation	1.89E-03
47	GO:0009409: response to cold	1.95E-03
48	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.27E-03
49	GO:1901259: chloroplast rRNA processing	2.27E-03
50	GO:0010161: red light signaling pathway	2.67E-03
51	GO:0008272: sulfate transport	2.67E-03
52	GO:0070370: cellular heat acclimation	2.67E-03
53	GO:0022904: respiratory electron transport chain	2.67E-03
54	GO:0010103: stomatal complex morphogenesis	2.67E-03
55	GO:0032880: regulation of protein localization	2.67E-03
56	GO:0015995: chlorophyll biosynthetic process	2.70E-03
57	GO:0045490: pectin catabolic process	2.71E-03
58	GO:0010928: regulation of auxin mediated signaling pathway	3.09E-03
59	GO:0005978: glycogen biosynthetic process	3.09E-03
60	GO:0006353: DNA-templated transcription, termination	3.09E-03
61	GO:0009704: de-etiolation	3.09E-03
62	GO:0009631: cold acclimation	3.45E-03
63	GO:0010099: regulation of photomorphogenesis	3.54E-03
64	GO:0006002: fructose 6-phosphate metabolic process	3.54E-03
65	GO:0001558: regulation of cell growth	3.54E-03
66	GO:0009414: response to water deprivation	3.90E-03
67	GO:0051865: protein autoubiquitination	4.00E-03
68	GO:0006783: heme biosynthetic process	4.00E-03
69	GO:0042761: very long-chain fatty acid biosynthetic process	4.49E-03
70	GO:0006782: protoporphyrinogen IX biosynthetic process	4.99E-03
71	GO:0048829: root cap development	4.99E-03
72	GO:0010015: root morphogenesis	5.52E-03
73	GO:0043085: positive regulation of catalytic activity	5.52E-03
74	GO:0009750: response to fructose	5.52E-03
75	GO:0010582: floral meristem determinacy	6.06E-03
76	GO:0080167: response to karrikin	6.20E-03
77	GO:0005986: sucrose biosynthetic process	6.61E-03
78	GO:2000012: regulation of auxin polar transport	6.61E-03
79	GO:0010628: positive regulation of gene expression	6.61E-03
80	GO:0006006: glucose metabolic process	6.61E-03
81	GO:0018107: peptidyl-threonine phosphorylation	6.61E-03
82	GO:0009718: anthocyanin-containing compound biosynthetic process	6.61E-03
83	GO:0006302: double-strand break repair	7.20E-03
84	GO:0048467: gynoecium development	7.20E-03
85	GO:0010207: photosystem II assembly	7.20E-03
86	GO:0010030: positive regulation of seed germination	7.79E-03
87	GO:0010025: wax biosynthetic process	8.41E-03
88	GO:0005975: carbohydrate metabolic process	8.42E-03
89	GO:0009944: polarity specification of adaxial/abaxial axis	9.03E-03
90	GO:0051302: regulation of cell division	9.69E-03
91	GO:0007017: microtubule-based process	9.69E-03
92	GO:0019915: lipid storage	1.03E-02
93	GO:0061077: chaperone-mediated protein folding	1.03E-02
94	GO:0051321: meiotic cell cycle	1.03E-02
95	GO:0035428: hexose transmembrane transport	1.10E-02
96	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.10E-02
97	GO:0009686: gibberellin biosynthetic process	1.17E-02
98	GO:0001944: vasculature development	1.17E-02
99	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.32E-02
100	GO:0008284: positive regulation of cell proliferation	1.32E-02
101	GO:0042631: cellular response to water deprivation	1.39E-02
102	GO:0042335: cuticle development	1.39E-02
103	GO:0010305: leaf vascular tissue pattern formation	1.47E-02
104	GO:0009958: positive gravitropism	1.47E-02
105	GO:0006662: glycerol ether metabolic process	1.47E-02
106	GO:0048868: pollen tube development	1.47E-02
107	GO:0046323: glucose import	1.47E-02
108	GO:0009646: response to absence of light	1.54E-02
109	GO:0007623: circadian rhythm	1.62E-02
110	GO:0019252: starch biosynthetic process	1.62E-02
111	GO:0032502: developmental process	1.78E-02
112	GO:0071281: cellular response to iron ion	1.87E-02
113	GO:0009735: response to cytokinin	1.88E-02
114	GO:0009607: response to biotic stimulus	2.30E-02
115	GO:0009627: systemic acquired resistance	2.39E-02
116	GO:0045893: positive regulation of transcription, DNA-templated	2.51E-02
117	GO:0009658: chloroplast organization	2.51E-02
118	GO:0016311: dephosphorylation	2.58E-02
119	GO:0006970: response to osmotic stress	2.70E-02
120	GO:0000160: phosphorelay signal transduction system	2.77E-02
121	GO:0009834: plant-type secondary cell wall biogenesis	2.87E-02
122	GO:0009723: response to ethylene	2.90E-02
123	GO:0009910: negative regulation of flower development	2.96E-02
124	GO:0048527: lateral root development	2.96E-02
125	GO:0034599: cellular response to oxidative stress	3.27E-02
126	GO:0009640: photomorphogenesis	3.79E-02
127	GO:0009644: response to high light intensity	4.01E-02
128	GO:0009965: leaf morphogenesis	4.12E-02
129	GO:0006855: drug transmembrane transport	4.23E-02
130	GO:0032259: methylation	4.38E-02
131	GO:0009664: plant-type cell wall organization	4.45E-02
132	GO:0009585: red, far-red light phototransduction	4.68E-02
133	GO:0051603: proteolysis involved in cellular protein catabolic process	4.80E-02
134	GO:0055114: oxidation-reduction process	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
2	GO:0008184: glycogen phosphorylase activity	0.00E+00
3	GO:0004567: beta-mannosidase activity	0.00E+00
4	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
5	GO:0004134: 4-alpha-glucanotransferase activity	0.00E+00
6	GO:0004645: phosphorylase activity	0.00E+00
7	GO:0080082: esculin beta-glucosidase activity	0.00E+00
8	GO:0048039: ubiquinone binding	0.00E+00
9	GO:0009899: ent-kaurene synthase activity	0.00E+00
10	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
11	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
12	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
13	GO:0030570: pectate lyase activity	6.00E-05
14	GO:0005227: calcium activated cation channel activity	1.73E-04
15	GO:0080079: cellobiose glucosidase activity	1.73E-04
16	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	1.73E-04
17	GO:0004853: uroporphyrinogen decarboxylase activity	1.73E-04
18	GO:0019203: carbohydrate phosphatase activity	1.73E-04
19	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.92E-04
20	GO:0018708: thiol S-methyltransferase activity	3.92E-04
21	GO:0003844: 1,4-alpha-glucan branching enzyme activity	3.92E-04
22	GO:0016868: intramolecular transferase activity, phosphotransferases	3.92E-04
23	GO:0010297: heteropolysaccharide binding	3.92E-04
24	GO:0004565: beta-galactosidase activity	4.32E-04
25	GO:0004180: carboxypeptidase activity	6.40E-04
26	GO:0043169: cation binding	6.40E-04
27	GO:0090729: toxin activity	6.40E-04
28	GO:0045174: glutathione dehydrogenase (ascorbate) activity	6.40E-04
29	GO:0016805: dipeptidase activity	6.40E-04
30	GO:0071917: triose-phosphate transmembrane transporter activity	6.40E-04
31	GO:0016851: magnesium chelatase activity	9.13E-04
32	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.21E-03
33	GO:0019199: transmembrane receptor protein kinase activity	1.21E-03
34	GO:0042277: peptide binding	1.21E-03
35	GO:0015120: phosphoglycerate transmembrane transporter activity	1.21E-03
36	GO:0015035: protein disulfide oxidoreductase activity	1.41E-03
37	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.54E-03
38	GO:2001070: starch binding	1.89E-03
39	GO:0004332: fructose-bisphosphate aldolase activity	1.89E-03
40	GO:0051920: peroxiredoxin activity	2.27E-03
41	GO:0005261: cation channel activity	2.27E-03
42	GO:0009055: electron carrier activity	2.37E-03
43	GO:0102483: scopolin beta-glucosidase activity	2.70E-03
44	GO:0005337: nucleoside transmembrane transporter activity	3.09E-03
45	GO:0016209: antioxidant activity	3.09E-03
46	GO:0004033: aldo-keto reductase (NADP) activity	3.09E-03
47	GO:0008271: secondary active sulfate transmembrane transporter activity	3.54E-03
48	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	4.00E-03
49	GO:0008422: beta-glucosidase activity	4.12E-03
50	GO:0008047: enzyme activator activity	4.99E-03
51	GO:0051537: 2 iron, 2 sulfur cluster binding	5.26E-03
52	GO:0043621: protein self-association	5.26E-03
53	GO:0044183: protein binding involved in protein folding	5.52E-03
54	GO:0015116: sulfate transmembrane transporter activity	6.06E-03
55	GO:0004521: endoribonuclease activity	6.06E-03
56	GO:0004022: alcohol dehydrogenase (NAD) activity	6.61E-03
57	GO:0008083: growth factor activity	7.20E-03
58	GO:0004857: enzyme inhibitor activity	9.03E-03
59	GO:0008408: 3'-5' exonuclease activity	1.03E-02
60	GO:0022891: substrate-specific transmembrane transporter activity	1.17E-02
61	GO:0016829: lyase activity	1.27E-02
62	GO:0030170: pyridoxal phosphate binding	1.30E-02
63	GO:0047134: protein-disulfide reductase activity	1.32E-02
64	GO:0004791: thioredoxin-disulfide reductase activity	1.54E-02
65	GO:0005355: glucose transmembrane transporter activity	1.54E-02
66	GO:0048038: quinone binding	1.70E-02
67	GO:0000156: phosphorelay response regulator activity	1.87E-02
68	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.87E-02
69	GO:0046872: metal ion binding	1.98E-02
70	GO:0005200: structural constituent of cytoskeleton	2.04E-02
71	GO:0016491: oxidoreductase activity	2.23E-02
72	GO:0008168: methyltransferase activity	2.41E-02
73	GO:0030247: polysaccharide binding	2.48E-02
74	GO:0030145: manganese ion binding	2.96E-02
75	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.98E-02
76	GO:0051539: 4 iron, 4 sulfur cluster binding	3.47E-02
77	GO:0004364: glutathione transferase activity	3.68E-02
78	GO:0004185: serine-type carboxypeptidase activity	3.79E-02
79	GO:0015293: symporter activity	4.12E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
3	GO:0009507: chloroplast	8.50E-09
4	GO:0009534: chloroplast thylakoid	7.48E-08
5	GO:0009570: chloroplast stroma	6.49E-07
6	GO:0009501: amyloplast	1.32E-04
7	GO:0000791: euchromatin	1.73E-04
8	GO:0005787: signal peptidase complex	1.73E-04
9	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.02E-04
10	GO:0030870: Mre11 complex	3.92E-04
11	GO:0009535: chloroplast thylakoid membrane	4.84E-04
12	GO:0030095: chloroplast photosystem II	4.87E-04
13	GO:0010007: magnesium chelatase complex	6.40E-04
14	GO:0009654: photosystem II oxygen evolving complex	7.39E-04
15	GO:0019898: extrinsic component of membrane	1.50E-03
16	GO:0000795: synaptonemal complex	1.54E-03
17	GO:0009579: thylakoid	1.61E-03
18	GO:0010287: plastoglobule	1.68E-03
19	GO:0010319: stromule	2.05E-03
20	GO:0009538: photosystem I reaction center	3.09E-03
21	GO:0031305: integral component of mitochondrial inner membrane	3.09E-03
22	GO:0045298: tubulin complex	4.00E-03
23	GO:0005740: mitochondrial envelope	4.99E-03
24	GO:0009505: plant-type cell wall	6.03E-03
25	GO:0009941: chloroplast envelope	8.09E-03
26	GO:0042651: thylakoid membrane	9.69E-03
27	GO:0009543: chloroplast thylakoid lumen	1.17E-02
28	GO:0000785: chromatin	1.78E-02
29	GO:0005874: microtubule	3.00E-02
30	GO:0031977: thylakoid lumen	3.58E-02
31	GO:0048046: apoplast	3.71E-02