co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G00360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:0007141: male meiosis I	0.00E+00
3	GO:0009667: plastid inner membrane organization	0.00E+00
4	GO:1904526: regulation of microtubule binding	0.00E+00
5	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
6	GO:1905499: trichome papilla formation	0.00E+00
7	GO:0019593: mannitol biosynthetic process	0.00E+00
8	GO:0010025: wax biosynthetic process	7.72E-15
9	GO:0042335: cuticle development	2.51E-13
10	GO:0010143: cutin biosynthetic process	6.29E-09
11	GO:0009409: response to cold	1.19E-08
12	GO:0006633: fatty acid biosynthetic process	1.40E-08
13	GO:0000038: very long-chain fatty acid metabolic process	2.03E-07
14	GO:0009737: response to abscisic acid	1.27E-06
15	GO:0009631: cold acclimation	1.95E-06
16	GO:0006665: sphingolipid metabolic process	4.82E-05
17	GO:0035435: phosphate ion transmembrane transport	7.11E-05
18	GO:0009416: response to light stimulus	7.58E-05
19	GO:0009414: response to water deprivation	9.27E-05
20	GO:0050829: defense response to Gram-negative bacterium	1.31E-04
21	GO:0008610: lipid biosynthetic process	1.67E-04
22	GO:0009609: response to symbiotic bacterium	2.02E-04
23	GO:0006723: cuticle hydrocarbon biosynthetic process	2.02E-04
24	GO:0042759: long-chain fatty acid biosynthetic process	2.02E-04
25	GO:0080051: cutin transport	2.02E-04
26	GO:0033481: galacturonate biosynthetic process	2.02E-04
27	GO:0098656: anion transmembrane transport	2.53E-04
28	GO:0042761: very long-chain fatty acid biosynthetic process	3.01E-04
29	GO:0015908: fatty acid transport	4.52E-04
30	GO:0010115: regulation of abscisic acid biosynthetic process	4.52E-04
31	GO:1901679: nucleotide transmembrane transport	4.52E-04
32	GO:0015709: thiosulfate transport	4.52E-04
33	GO:0071422: succinate transmembrane transport	4.52E-04
34	GO:0031407: oxylipin metabolic process	4.52E-04
35	GO:0010289: homogalacturonan biosynthetic process	4.52E-04
36	GO:0005983: starch catabolic process	4.70E-04
37	GO:0050832: defense response to fungus	5.29E-04
38	GO:0010150: leaf senescence	6.15E-04
39	GO:0006631: fatty acid metabolic process	7.17E-04
40	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	7.36E-04
41	GO:0046168: glycerol-3-phosphate catabolic process	7.36E-04
42	GO:0043447: alkane biosynthetic process	7.36E-04
43	GO:0080121: AMP transport	7.36E-04
44	GO:0009062: fatty acid catabolic process	7.36E-04
45	GO:0006081: cellular aldehyde metabolic process	7.36E-04
46	GO:0010325: raffinose family oligosaccharide biosynthetic process	7.36E-04
47	GO:0009873: ethylene-activated signaling pathway	9.92E-04
48	GO:0042538: hyperosmotic salinity response	1.05E-03
49	GO:0015729: oxaloacetate transport	1.05E-03
50	GO:0006072: glycerol-3-phosphate metabolic process	1.05E-03
51	GO:0009413: response to flooding	1.05E-03
52	GO:0051259: protein oligomerization	1.05E-03
53	GO:0009809: lignin biosynthetic process	1.15E-03
54	GO:0006970: response to osmotic stress	1.32E-03
55	GO:0070417: cellular response to cold	1.38E-03
56	GO:0006536: glutamate metabolic process	1.40E-03
57	GO:0022622: root system development	1.40E-03
58	GO:0006552: leucine catabolic process	1.40E-03
59	GO:0071585: detoxification of cadmium ion	1.40E-03
60	GO:0015867: ATP transport	1.40E-03
61	GO:0010222: stem vascular tissue pattern formation	1.40E-03
62	GO:0046345: abscisic acid catabolic process	1.40E-03
63	GO:0042631: cellular response to water deprivation	1.49E-03
64	GO:0042545: cell wall modification	1.72E-03
65	GO:0071423: malate transmembrane transport	1.78E-03
66	GO:0048497: maintenance of floral organ identity	1.78E-03
67	GO:0009611: response to wounding	1.80E-03
68	GO:0000302: response to reactive oxygen species	1.98E-03
69	GO:0048232: male gamete generation	2.19E-03
70	GO:0009913: epidermal cell differentiation	2.19E-03
71	GO:1900425: negative regulation of defense response to bacterium	2.19E-03
72	GO:0006574: valine catabolic process	2.19E-03
73	GO:0015866: ADP transport	2.19E-03
74	GO:0045926: negative regulation of growth	2.63E-03
75	GO:0009082: branched-chain amino acid biosynthetic process	2.63E-03
76	GO:0098655: cation transmembrane transport	2.63E-03
77	GO:0010555: response to mannitol	2.63E-03
78	GO:0030497: fatty acid elongation	3.09E-03
79	GO:0008272: sulfate transport	3.09E-03
80	GO:1902074: response to salt	3.09E-03
81	GO:0032880: regulation of protein localization	3.09E-03
82	GO:0006401: RNA catabolic process	3.09E-03
83	GO:0009610: response to symbiotic fungus	3.09E-03
84	GO:0045490: pectin catabolic process	3.58E-03
85	GO:0007155: cell adhesion	3.59E-03
86	GO:0009819: drought recovery	3.59E-03
87	GO:0009415: response to water	3.59E-03
88	GO:2000070: regulation of response to water deprivation	3.59E-03
89	GO:0050821: protein stabilization	3.59E-03
90	GO:0005975: carbohydrate metabolic process	3.78E-03
91	GO:0009827: plant-type cell wall modification	4.10E-03
92	GO:0010345: suberin biosynthetic process	4.65E-03
93	GO:2000280: regulation of root development	5.21E-03
94	GO:0006839: mitochondrial transport	5.34E-03
95	GO:0051026: chiasma assembly	5.80E-03
96	GO:0030148: sphingolipid biosynthetic process	6.41E-03
97	GO:0009644: response to high light intensity	6.53E-03
98	GO:0016024: CDP-diacylglycerol biosynthetic process	7.04E-03
99	GO:0045037: protein import into chloroplast stroma	7.04E-03
100	GO:0010588: cotyledon vascular tissue pattern formation	7.70E-03
101	GO:2000012: regulation of auxin polar transport	7.70E-03
102	GO:0050826: response to freezing	7.70E-03
103	GO:0018107: peptidyl-threonine phosphorylation	7.70E-03
104	GO:0005986: sucrose biosynthetic process	7.70E-03
105	GO:0080167: response to karrikin	8.18E-03
106	GO:0048440: carpel development	8.37E-03
107	GO:0010200: response to chitin	8.55E-03
108	GO:0009225: nucleotide-sugar metabolic process	9.07E-03
109	GO:0070588: calcium ion transmembrane transport	9.07E-03
110	GO:0048367: shoot system development	9.95E-03
111	GO:0030150: protein import into mitochondrial matrix	1.05E-02
112	GO:0006869: lipid transport	1.16E-02
113	GO:0009269: response to desiccation	1.21E-02
114	GO:0031408: oxylipin biosynthetic process	1.21E-02
115	GO:0016998: cell wall macromolecule catabolic process	1.21E-02
116	GO:0051260: protein homooligomerization	1.21E-02
117	GO:0010017: red or far-red light signaling pathway	1.29E-02
118	GO:0007131: reciprocal meiotic recombination	1.29E-02
119	GO:0016042: lipid catabolic process	1.30E-02
120	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.37E-02
121	GO:0001944: vasculature development	1.37E-02
122	GO:0010091: trichome branching	1.45E-02
123	GO:0008284: positive regulation of cell proliferation	1.54E-02
124	GO:0048653: anther development	1.62E-02
125	GO:0010268: brassinosteroid homeostasis	1.71E-02
126	GO:0045489: pectin biosynthetic process	1.71E-02
127	GO:0009958: positive gravitropism	1.71E-02
128	GO:0048868: pollen tube development	1.71E-02
129	GO:0009651: response to salt stress	1.76E-02
130	GO:0009749: response to glucose	1.89E-02
131	GO:0019252: starch biosynthetic process	1.89E-02
132	GO:0008654: phospholipid biosynthetic process	1.89E-02
133	GO:0006635: fatty acid beta-oxidation	1.99E-02
134	GO:0016132: brassinosteroid biosynthetic process	1.99E-02
135	GO:0007623: circadian rhythm	2.01E-02
136	GO:0071555: cell wall organization	2.05E-02
137	GO:0048235: pollen sperm cell differentiation	2.08E-02
138	GO:0010090: trichome morphogenesis	2.18E-02
139	GO:0055114: oxidation-reduction process	2.27E-02
140	GO:0016125: sterol metabolic process	2.28E-02
141	GO:0009639: response to red or far red light	2.28E-02
142	GO:0009828: plant-type cell wall loosening	2.28E-02
143	GO:0006310: DNA recombination	2.28E-02
144	GO:0010286: heat acclimation	2.38E-02
145	GO:0010411: xyloglucan metabolic process	2.90E-02
146	GO:0009826: unidimensional cell growth	3.00E-02
147	GO:0048481: plant ovule development	3.12E-02
148	GO:0030244: cellulose biosynthetic process	3.12E-02
149	GO:0010311: lateral root formation	3.23E-02
150	GO:0048767: root hair elongation	3.23E-02
151	GO:0009834: plant-type secondary cell wall biogenesis	3.35E-02
152	GO:0006811: ion transport	3.35E-02
153	GO:0048527: lateral root development	3.46E-02
154	GO:0045087: innate immune response	3.69E-02
155	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.99E-02
156	GO:0009744: response to sucrose	4.42E-02
157	GO:0042546: cell wall biogenesis	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0010303: limit dextrinase activity	0.00E+00
2	GO:0005534: galactose binding	0.00E+00
3	GO:0051060: pullulanase activity	0.00E+00
4	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
5	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.12E-12
6	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.12E-12
7	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.12E-12
8	GO:0009922: fatty acid elongase activity	1.81E-12
9	GO:0052747: sinapyl alcohol dehydrogenase activity	2.94E-06
10	GO:0070330: aromatase activity	7.09E-06
11	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.78E-05
12	GO:0016746: transferase activity, transferring acyl groups	2.61E-05
13	GO:0018685: alkane 1-monooxygenase activity	4.82E-05
14	GO:0004556: alpha-amylase activity	7.11E-05
15	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	7.11E-05
16	GO:0052631: sphingolipid delta-8 desaturase activity	2.02E-04
17	GO:0031957: very long-chain fatty acid-CoA ligase activity	2.02E-04
18	GO:0015245: fatty acid transporter activity	2.02E-04
19	GO:0008809: carnitine racemase activity	2.02E-04
20	GO:0015117: thiosulfate transmembrane transporter activity	4.52E-04
21	GO:1901677: phosphate transmembrane transporter activity	4.52E-04
22	GO:0016629: 12-oxophytodienoate reductase activity	4.52E-04
23	GO:0017040: ceramidase activity	4.52E-04
24	GO:0005310: dicarboxylic acid transmembrane transporter activity	7.36E-04
25	GO:0050734: hydroxycinnamoyltransferase activity	7.36E-04
26	GO:0015141: succinate transmembrane transporter activity	7.36E-04
27	GO:0047274: galactinol-sucrose galactosyltransferase activity	7.36E-04
28	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	7.36E-04
29	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	7.36E-04
30	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	7.36E-04
31	GO:0015131: oxaloacetate transmembrane transporter activity	1.05E-03
32	GO:0052656: L-isoleucine transaminase activity	1.05E-03
33	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.05E-03
34	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.05E-03
35	GO:0052654: L-leucine transaminase activity	1.05E-03
36	GO:0031176: endo-1,4-beta-xylanase activity	1.05E-03
37	GO:0004351: glutamate decarboxylase activity	1.05E-03
38	GO:0052655: L-valine transaminase activity	1.05E-03
39	GO:0008289: lipid binding	1.13E-03
40	GO:0045330: aspartyl esterase activity	1.30E-03
41	GO:0004084: branched-chain-amino-acid transaminase activity	1.40E-03
42	GO:0008526: phosphatidylinositol transporter activity	1.40E-03
43	GO:0050378: UDP-glucuronate 4-epimerase activity	1.40E-03
44	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.47E-03
45	GO:0030599: pectinesterase activity	1.66E-03
46	GO:0080122: AMP transmembrane transporter activity	1.78E-03
47	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.78E-03
48	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.19E-03
49	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.19E-03
50	GO:0016791: phosphatase activity	2.39E-03
51	GO:0016740: transferase activity	2.45E-03
52	GO:0102391: decanoate--CoA ligase activity	2.63E-03
53	GO:0005347: ATP transmembrane transporter activity	2.63E-03
54	GO:0015217: ADP transmembrane transporter activity	2.63E-03
55	GO:0015140: malate transmembrane transporter activity	3.09E-03
56	GO:0004467: long-chain fatty acid-CoA ligase activity	3.09E-03
57	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.52E-03
58	GO:0015288: porin activity	3.59E-03
59	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	4.65E-03
60	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.84E-03
61	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	5.21E-03
62	GO:0004864: protein phosphatase inhibitor activity	5.80E-03
63	GO:0016788: hydrolase activity, acting on ester bonds	6.38E-03
64	GO:0003680: AT DNA binding	6.41E-03
65	GO:0015116: sulfate transmembrane transporter activity	7.04E-03
66	GO:0015114: phosphate ion transmembrane transporter activity	7.70E-03
67	GO:0000175: 3'-5'-exoribonuclease activity	7.70E-03
68	GO:0015266: protein channel activity	7.70E-03
69	GO:0005315: inorganic phosphate transmembrane transporter activity	7.70E-03
70	GO:0005262: calcium channel activity	7.70E-03
71	GO:0008083: growth factor activity	8.37E-03
72	GO:0052689: carboxylic ester hydrolase activity	9.30E-03
73	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.08E-02
74	GO:0051087: chaperone binding	1.13E-02
75	GO:0004540: ribonuclease activity	1.21E-02
76	GO:0008514: organic anion transmembrane transporter activity	1.45E-02
77	GO:0010181: FMN binding	1.80E-02
78	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.99E-02
79	GO:0005506: iron ion binding	2.01E-02
80	GO:0003824: catalytic activity	2.36E-02
81	GO:0016413: O-acetyltransferase activity	2.48E-02
82	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.90E-02
83	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.12E-02
84	GO:0005096: GTPase activator activity	3.23E-02
85	GO:0003993: acid phosphatase activity	3.81E-02
86	GO:0043565: sequence-specific DNA binding	3.86E-02
87	GO:0019825: oxygen binding	4.28E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0046658: anchored component of plasma membrane	1.14E-06
3	GO:0009505: plant-type cell wall	3.76E-05
4	GO:0016021: integral component of membrane	1.00E-04
5	GO:0009923: fatty acid elongase complex	2.02E-04
6	GO:0005783: endoplasmic reticulum	2.37E-04
7	GO:0031225: anchored component of membrane	2.41E-04
8	GO:0031357: integral component of chloroplast inner membrane	4.52E-04
9	GO:0009897: external side of plasma membrane	7.36E-04
10	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.05E-03
11	GO:0005618: cell wall	1.12E-03
12	GO:0005789: endoplasmic reticulum membrane	1.14E-03
13	GO:0009527: plastid outer membrane	1.40E-03
14	GO:0000178: exosome (RNase complex)	1.78E-03
15	GO:0016020: membrane	2.22E-03
16	GO:0005743: mitochondrial inner membrane	2.66E-03
17	GO:0031305: integral component of mitochondrial inner membrane	3.59E-03
18	GO:0046930: pore complex	4.10E-03
19	GO:0005886: plasma membrane	8.96E-03
20	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.45E-02
21	GO:0005802: trans-Golgi network	1.45E-02
22	GO:0000790: nuclear chromatin	1.54E-02
23	GO:0005768: endosome	1.75E-02
24	GO:0071944: cell periphery	2.18E-02
25	GO:0005615: extracellular space	2.25E-02
26	GO:0032580: Golgi cisterna membrane	2.28E-02
27	GO:0000932: P-body	2.58E-02
28	GO:0009707: chloroplast outer membrane	3.12E-02
29	GO:0005576: extracellular region	3.45E-02
30	GO:0009506: plasmodesma	4.94E-02