GO Enrichment Analysis of Co-expressed Genes with
AT4G00100
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000740: nuclear membrane fusion | 0.00E+00 |
| 2 | GO:0006412: translation | 2.56E-113 |
| 3 | GO:0042254: ribosome biogenesis | 1.32E-41 |
| 4 | GO:0000027: ribosomal large subunit assembly | 2.62E-12 |
| 5 | GO:0000028: ribosomal small subunit assembly | 3.56E-06 |
| 6 | GO:1902626: assembly of large subunit precursor of preribosome | 8.14E-06 |
| 7 | GO:0002181: cytoplasmic translation | 8.14E-06 |
| 8 | GO:0009955: adaxial/abaxial pattern specification | 1.11E-04 |
| 9 | GO:2001006: regulation of cellulose biosynthetic process | 2.18E-04 |
| 10 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.18E-04 |
| 11 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.18E-04 |
| 12 | GO:0006407: rRNA export from nucleus | 2.18E-04 |
| 13 | GO:0015801: aromatic amino acid transport | 2.18E-04 |
| 14 | GO:0009245: lipid A biosynthetic process | 2.82E-04 |
| 15 | GO:0000387: spliceosomal snRNP assembly | 3.36E-04 |
| 16 | GO:0010198: synergid death | 4.86E-04 |
| 17 | GO:0071668: plant-type cell wall assembly | 4.86E-04 |
| 18 | GO:0006820: anion transport | 5.22E-04 |
| 19 | GO:0006626: protein targeting to mitochondrion | 5.92E-04 |
| 20 | GO:0042256: mature ribosome assembly | 7.90E-04 |
| 21 | GO:0045793: positive regulation of cell size | 7.90E-04 |
| 22 | GO:0006289: nucleotide-excision repair | 9.15E-04 |
| 23 | GO:0006414: translational elongation | 1.12E-03 |
| 24 | GO:0032877: positive regulation of DNA endoreduplication | 1.13E-03 |
| 25 | GO:0070301: cellular response to hydrogen peroxide | 1.13E-03 |
| 26 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.13E-03 |
| 27 | GO:0006241: CTP biosynthetic process | 1.13E-03 |
| 28 | GO:0006165: nucleoside diphosphate phosphorylation | 1.13E-03 |
| 29 | GO:0006228: UTP biosynthetic process | 1.13E-03 |
| 30 | GO:0009558: embryo sac cellularization | 1.13E-03 |
| 31 | GO:0009165: nucleotide biosynthetic process | 1.50E-03 |
| 32 | GO:0051781: positive regulation of cell division | 1.50E-03 |
| 33 | GO:0006183: GTP biosynthetic process | 1.50E-03 |
| 34 | GO:0009735: response to cytokinin | 1.79E-03 |
| 35 | GO:0043248: proteasome assembly | 2.35E-03 |
| 36 | GO:0000398: mRNA splicing, via spliceosome | 2.46E-03 |
| 37 | GO:0009651: response to salt stress | 2.82E-03 |
| 38 | GO:1901001: negative regulation of response to salt stress | 2.83E-03 |
| 39 | GO:0032880: regulation of protein localization | 3.33E-03 |
| 40 | GO:0009793: embryo development ending in seed dormancy | 3.58E-03 |
| 41 | GO:0009808: lignin metabolic process | 4.42E-03 |
| 42 | GO:0098656: anion transmembrane transport | 5.00E-03 |
| 43 | GO:0048589: developmental growth | 5.00E-03 |
| 44 | GO:0008283: cell proliferation | 6.73E-03 |
| 45 | GO:0010015: root morphogenesis | 6.91E-03 |
| 46 | GO:0006913: nucleocytoplasmic transport | 6.91E-03 |
| 47 | GO:0015770: sucrose transport | 6.91E-03 |
| 48 | GO:0009644: response to high light intensity | 7.28E-03 |
| 49 | GO:0009965: leaf morphogenesis | 7.56E-03 |
| 50 | GO:0010102: lateral root morphogenesis | 8.30E-03 |
| 51 | GO:0048467: gynoecium development | 9.03E-03 |
| 52 | GO:0006446: regulation of translational initiation | 9.03E-03 |
| 53 | GO:0006487: protein N-linked glycosylation | 1.14E-02 |
| 54 | GO:0009116: nucleoside metabolic process | 1.14E-02 |
| 55 | GO:0030150: protein import into mitochondrial matrix | 1.14E-02 |
| 56 | GO:0006406: mRNA export from nucleus | 1.14E-02 |
| 57 | GO:0009409: response to cold | 1.22E-02 |
| 58 | GO:0051260: protein homooligomerization | 1.30E-02 |
| 59 | GO:0010431: seed maturation | 1.30E-02 |
| 60 | GO:0003333: amino acid transmembrane transport | 1.30E-02 |
| 61 | GO:0007005: mitochondrion organization | 1.39E-02 |
| 62 | GO:0010197: polar nucleus fusion | 1.85E-02 |
| 63 | GO:0006633: fatty acid biosynthetic process | 2.04E-02 |
| 64 | GO:0006413: translational initiation | 2.09E-02 |
| 65 | GO:0009630: gravitropism | 2.25E-02 |
| 66 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.51E-02 |
| 67 | GO:0000910: cytokinesis | 2.68E-02 |
| 68 | GO:0006811: ion transport | 3.62E-02 |
| 69 | GO:0006865: amino acid transport | 3.86E-02 |
| 70 | GO:0000724: double-strand break repair via homologous recombination | 3.86E-02 |
| 71 | GO:0046686: response to cadmium ion | 4.60E-02 |
| 72 | GO:0009926: auxin polar transport | 4.78E-02 |
| 73 | GO:0000209: protein polyubiquitination | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 6.25E-139 |
| 2 | GO:0003729: mRNA binding | 1.58E-31 |
| 3 | GO:0019843: rRNA binding | 3.16E-10 |
| 4 | GO:0008097: 5S rRNA binding | 1.87E-05 |
| 5 | GO:0031177: phosphopantetheine binding | 8.04E-05 |
| 6 | GO:0000035: acyl binding | 1.11E-04 |
| 7 | GO:0015288: porin activity | 1.88E-04 |
| 8 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.88E-04 |
| 9 | GO:0008308: voltage-gated anion channel activity | 2.33E-04 |
| 10 | GO:0015173: aromatic amino acid transmembrane transporter activity | 4.86E-04 |
| 11 | GO:0004749: ribose phosphate diphosphokinase activity | 1.13E-03 |
| 12 | GO:0004550: nucleoside diphosphate kinase activity | 1.13E-03 |
| 13 | GO:0010011: auxin binding | 1.50E-03 |
| 14 | GO:0070628: proteasome binding | 1.50E-03 |
| 15 | GO:0004576: oligosaccharyl transferase activity | 1.50E-03 |
| 16 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.91E-03 |
| 17 | GO:0005275: amine transmembrane transporter activity | 1.91E-03 |
| 18 | GO:0031593: polyubiquitin binding | 2.35E-03 |
| 19 | GO:0043022: ribosome binding | 3.86E-03 |
| 20 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.12E-03 |
| 21 | GO:0044183: protein binding involved in protein folding | 6.91E-03 |
| 22 | GO:0008794: arsenate reductase (glutaredoxin) activity | 6.91E-03 |
| 23 | GO:0008515: sucrose transmembrane transporter activity | 6.91E-03 |
| 24 | GO:0031072: heat shock protein binding | 8.30E-03 |
| 25 | GO:0015266: protein channel activity | 8.30E-03 |
| 26 | GO:0051119: sugar transmembrane transporter activity | 9.79E-03 |
| 27 | GO:0043130: ubiquitin binding | 1.14E-02 |
| 28 | GO:0051082: unfolded protein binding | 1.30E-02 |
| 29 | GO:0003723: RNA binding | 2.00E-02 |
| 30 | GO:0004872: receptor activity | 2.05E-02 |
| 31 | GO:0003684: damaged DNA binding | 2.46E-02 |
| 32 | GO:0050897: cobalt ion binding | 3.74E-02 |
| 33 | GO:0003746: translation elongation factor activity | 3.99E-02 |
| 34 | GO:0003993: acid phosphatase activity | 4.12E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0005675: holo TFIIH complex | 0.00E+00 |
| 3 | GO:0005840: ribosome | 4.78E-101 |
| 4 | GO:0022626: cytosolic ribosome | 9.33E-92 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 9.81E-86 |
| 6 | GO:0022627: cytosolic small ribosomal subunit | 7.43E-51 |
| 7 | GO:0005737: cytoplasm | 4.51E-33 |
| 8 | GO:0005829: cytosol | 1.81E-27 |
| 9 | GO:0005730: nucleolus | 7.34E-24 |
| 10 | GO:0009506: plasmodesma | 1.07E-19 |
| 11 | GO:0005774: vacuolar membrane | 2.09E-13 |
| 12 | GO:0015934: large ribosomal subunit | 4.85E-11 |
| 13 | GO:0016020: membrane | 5.70E-10 |
| 14 | GO:0015935: small ribosomal subunit | 4.03E-08 |
| 15 | GO:0005618: cell wall | 2.35E-07 |
| 16 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.55E-06 |
| 17 | GO:0005886: plasma membrane | 7.18E-06 |
| 18 | GO:0005773: vacuole | 7.49E-06 |
| 19 | GO:0030686: 90S preribosome | 2.18E-04 |
| 20 | GO:0046930: pore complex | 2.33E-04 |
| 21 | GO:0071011: precatalytic spliceosome | 3.36E-04 |
| 22 | GO:0071013: catalytic step 2 spliceosome | 4.56E-04 |
| 23 | GO:0019013: viral nucleocapsid | 5.92E-04 |
| 24 | GO:0000439: core TFIIH complex | 7.90E-04 |
| 25 | GO:0034719: SMN-Sm protein complex | 7.90E-04 |
| 26 | GO:0005853: eukaryotic translation elongation factor 1 complex | 7.90E-04 |
| 27 | GO:0070469: respiratory chain | 1.01E-03 |
| 28 | GO:0005741: mitochondrial outer membrane | 1.10E-03 |
| 29 | GO:1990726: Lsm1-7-Pat1 complex | 1.13E-03 |
| 30 | GO:0005682: U5 snRNP | 1.50E-03 |
| 31 | GO:0005687: U4 snRNP | 1.91E-03 |
| 32 | GO:0097526: spliceosomal tri-snRNP complex | 1.91E-03 |
| 33 | GO:0008250: oligosaccharyltransferase complex | 1.91E-03 |
| 34 | GO:0005689: U12-type spliceosomal complex | 2.83E-03 |
| 35 | GO:0016272: prefoldin complex | 2.83E-03 |
| 36 | GO:0005688: U6 snRNP | 3.86E-03 |
| 37 | GO:0071004: U2-type prespliceosome | 3.86E-03 |
| 38 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 4.42E-03 |
| 39 | GO:0005742: mitochondrial outer membrane translocase complex | 4.42E-03 |
| 40 | GO:0005685: U1 snRNP | 5.00E-03 |
| 41 | GO:0005686: U2 snRNP | 6.25E-03 |
| 42 | GO:0005852: eukaryotic translation initiation factor 3 complex | 6.91E-03 |
| 43 | GO:0008541: proteasome regulatory particle, lid subcomplex | 6.91E-03 |
| 44 | GO:0048471: perinuclear region of cytoplasm | 6.91E-03 |
| 45 | GO:0000502: proteasome complex | 9.08E-03 |
| 46 | GO:0005681: spliceosomal complex | 1.07E-02 |
| 47 | GO:0005758: mitochondrial intermembrane space | 1.14E-02 |
| 48 | GO:0005622: intracellular | 1.99E-02 |
| 49 | GO:0005759: mitochondrial matrix | 2.04E-02 |
| 50 | GO:0000932: P-body | 2.79E-02 |
| 51 | GO:0005788: endoplasmic reticulum lumen | 2.91E-02 |
| 52 | GO:0009507: chloroplast | 3.98E-02 |