GO Enrichment Analysis of Co-expressed Genes with
AT4G00026
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 3 | GO:0006412: translation | 1.94E-18 |
| 4 | GO:0006626: protein targeting to mitochondrion | 2.15E-06 |
| 5 | GO:0006413: translational initiation | 2.62E-06 |
| 6 | GO:0009735: response to cytokinin | 1.07E-05 |
| 7 | GO:0000494: box C/D snoRNA 3'-end processing | 7.39E-05 |
| 8 | GO:1990258: histone glutamine methylation | 7.39E-05 |
| 9 | GO:0048569: post-embryonic animal organ development | 1.77E-04 |
| 10 | GO:0015786: UDP-glucose transport | 1.77E-04 |
| 11 | GO:0006364: rRNA processing | 1.98E-04 |
| 12 | GO:0030150: protein import into mitochondrial matrix | 2.13E-04 |
| 13 | GO:0007005: mitochondrion organization | 2.87E-04 |
| 14 | GO:0015783: GDP-fucose transport | 2.99E-04 |
| 15 | GO:0008033: tRNA processing | 4.00E-04 |
| 16 | GO:0046513: ceramide biosynthetic process | 4.32E-04 |
| 17 | GO:0072334: UDP-galactose transmembrane transport | 4.32E-04 |
| 18 | GO:0009855: determination of bilateral symmetry | 4.32E-04 |
| 19 | GO:0009793: embryo development ending in seed dormancy | 5.49E-04 |
| 20 | GO:0042273: ribosomal large subunit biogenesis | 5.75E-04 |
| 21 | GO:0045116: protein neddylation | 7.29E-04 |
| 22 | GO:0031167: rRNA methylation | 7.29E-04 |
| 23 | GO:0000470: maturation of LSU-rRNA | 8.91E-04 |
| 24 | GO:0000245: spliceosomal complex assembly | 1.06E-03 |
| 25 | GO:0009955: adaxial/abaxial pattern specification | 1.06E-03 |
| 26 | GO:0006458: 'de novo' protein folding | 1.06E-03 |
| 27 | GO:0080186: developmental vegetative growth | 1.24E-03 |
| 28 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.43E-03 |
| 29 | GO:0001510: RNA methylation | 1.63E-03 |
| 30 | GO:0001558: regulation of cell growth | 1.63E-03 |
| 31 | GO:0006367: transcription initiation from RNA polymerase II promoter | 1.63E-03 |
| 32 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.63E-03 |
| 33 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.05E-03 |
| 34 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 2.28E-03 |
| 35 | GO:0006096: glycolytic process | 2.46E-03 |
| 36 | GO:0006820: anion transport | 2.75E-03 |
| 37 | GO:0009553: embryo sac development | 2.86E-03 |
| 38 | GO:0002237: response to molecule of bacterial origin | 3.25E-03 |
| 39 | GO:0000027: ribosomal large subunit assembly | 4.06E-03 |
| 40 | GO:0042744: hydrogen peroxide catabolic process | 4.18E-03 |
| 41 | GO:0009651: response to salt stress | 4.34E-03 |
| 42 | GO:0051302: regulation of cell division | 4.34E-03 |
| 43 | GO:0061077: chaperone-mediated protein folding | 4.63E-03 |
| 44 | GO:0046686: response to cadmium ion | 4.95E-03 |
| 45 | GO:0010197: polar nucleus fusion | 6.51E-03 |
| 46 | GO:0009960: endosperm development | 6.51E-03 |
| 47 | GO:0010183: pollen tube guidance | 7.19E-03 |
| 48 | GO:0009749: response to glucose | 7.19E-03 |
| 49 | GO:0000302: response to reactive oxygen species | 7.53E-03 |
| 50 | GO:0042254: ribosome biogenesis | 7.97E-03 |
| 51 | GO:0006414: translational elongation | 8.00E-03 |
| 52 | GO:0016579: protein deubiquitination | 9.36E-03 |
| 53 | GO:0016049: cell growth | 1.13E-02 |
| 54 | GO:0006811: ion transport | 1.26E-02 |
| 55 | GO:0048527: lateral root development | 1.30E-02 |
| 56 | GO:0045087: innate immune response | 1.39E-02 |
| 57 | GO:0034599: cellular response to oxidative stress | 1.43E-02 |
| 58 | GO:0009408: response to heat | 1.44E-02 |
| 59 | GO:0009846: pollen germination | 1.95E-02 |
| 60 | GO:0009416: response to light stimulus | 2.55E-02 |
| 61 | GO:0009739: response to gibberellin | 4.22E-02 |
| 62 | GO:0008380: RNA splicing | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016881: acid-amino acid ligase activity | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 4.04E-24 |
| 3 | GO:0003746: translation elongation factor activity | 3.08E-06 |
| 4 | GO:0003729: mRNA binding | 3.45E-06 |
| 5 | GO:0003743: translation initiation factor activity | 4.67E-06 |
| 6 | GO:0000166: nucleotide binding | 1.38E-05 |
| 7 | GO:0019843: rRNA binding | 3.26E-05 |
| 8 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 7.39E-05 |
| 9 | GO:1990259: histone-glutamine methyltransferase activity | 7.39E-05 |
| 10 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 7.39E-05 |
| 11 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 7.39E-05 |
| 12 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 7.39E-05 |
| 13 | GO:0004634: phosphopyruvate hydratase activity | 1.77E-04 |
| 14 | GO:0050291: sphingosine N-acyltransferase activity | 1.77E-04 |
| 15 | GO:0004618: phosphoglycerate kinase activity | 1.77E-04 |
| 16 | GO:0019781: NEDD8 activating enzyme activity | 1.77E-04 |
| 17 | GO:0008805: carbon-monoxide oxygenase activity | 1.77E-04 |
| 18 | GO:0005457: GDP-fucose transmembrane transporter activity | 2.99E-04 |
| 19 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 2.99E-04 |
| 20 | GO:0008649: rRNA methyltransferase activity | 2.99E-04 |
| 21 | GO:0005460: UDP-glucose transmembrane transporter activity | 4.32E-04 |
| 22 | GO:0005459: UDP-galactose transmembrane transporter activity | 7.29E-04 |
| 23 | GO:0008641: small protein activating enzyme activity | 7.29E-04 |
| 24 | GO:0004130: cytochrome-c peroxidase activity | 8.91E-04 |
| 25 | GO:0016688: L-ascorbate peroxidase activity | 8.91E-04 |
| 26 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.73E-04 |
| 27 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.06E-03 |
| 28 | GO:0008235: metalloexopeptidase activity | 1.24E-03 |
| 29 | GO:0030515: snoRNA binding | 1.24E-03 |
| 30 | GO:0015288: porin activity | 1.43E-03 |
| 31 | GO:0008135: translation factor activity, RNA binding | 1.63E-03 |
| 32 | GO:0008308: voltage-gated anion channel activity | 1.63E-03 |
| 33 | GO:0000989: transcription factor activity, transcription factor binding | 1.83E-03 |
| 34 | GO:0005525: GTP binding | 1.84E-03 |
| 35 | GO:0044183: protein binding involved in protein folding | 2.51E-03 |
| 36 | GO:0015266: protein channel activity | 3.00E-03 |
| 37 | GO:0031418: L-ascorbic acid binding | 4.06E-03 |
| 38 | GO:0051087: chaperone binding | 4.34E-03 |
| 39 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 4.63E-03 |
| 40 | GO:0008514: organic anion transmembrane transporter activity | 5.54E-03 |
| 41 | GO:0010181: FMN binding | 6.84E-03 |
| 42 | GO:0005515: protein binding | 6.97E-03 |
| 43 | GO:0004601: peroxidase activity | 7.82E-03 |
| 44 | GO:0050897: cobalt ion binding | 1.30E-02 |
| 45 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.39E-02 |
| 46 | GO:0003924: GTPase activity | 1.44E-02 |
| 47 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.52E-02 |
| 48 | GO:0051082: unfolded protein binding | 2.64E-02 |
| 49 | GO:0016829: lyase activity | 3.27E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0005674: transcription factor TFIIF complex | 0.00E+00 |
| 3 | GO:0022626: cytosolic ribosome | 3.34E-20 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 2.20E-14 |
| 5 | GO:0005840: ribosome | 3.87E-13 |
| 6 | GO:0005730: nucleolus | 1.43E-10 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 2.26E-10 |
| 8 | GO:0015934: large ribosomal subunit | 7.25E-10 |
| 9 | GO:0005829: cytosol | 1.38E-09 |
| 10 | GO:0009506: plasmodesma | 2.23E-08 |
| 11 | GO:0016020: membrane | 8.63E-07 |
| 12 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.18E-05 |
| 13 | GO:0005737: cytoplasm | 1.51E-04 |
| 14 | GO:0000015: phosphopyruvate hydratase complex | 1.77E-04 |
| 15 | GO:0005741: mitochondrial outer membrane | 2.61E-04 |
| 16 | GO:0005834: heterotrimeric G-protein complex | 2.70E-04 |
| 17 | GO:0005618: cell wall | 4.19E-04 |
| 18 | GO:0005773: vacuole | 8.05E-04 |
| 19 | GO:0005851: eukaryotic translation initiation factor 2B complex | 8.91E-04 |
| 20 | GO:0000974: Prp19 complex | 8.91E-04 |
| 21 | GO:0031428: box C/D snoRNP complex | 8.91E-04 |
| 22 | GO:0005774: vacuolar membrane | 1.21E-03 |
| 23 | GO:0046930: pore complex | 1.63E-03 |
| 24 | GO:0005742: mitochondrial outer membrane translocase complex | 1.63E-03 |
| 25 | GO:0071011: precatalytic spliceosome | 2.05E-03 |
| 26 | GO:0015030: Cajal body | 2.05E-03 |
| 27 | GO:0005743: mitochondrial inner membrane | 2.13E-03 |
| 28 | GO:0005886: plasma membrane | 2.19E-03 |
| 29 | GO:0005740: mitochondrial envelope | 2.28E-03 |
| 30 | GO:0005852: eukaryotic translation initiation factor 3 complex | 2.51E-03 |
| 31 | GO:0071013: catalytic step 2 spliceosome | 2.51E-03 |
| 32 | GO:0032040: small-subunit processome | 2.75E-03 |
| 33 | GO:0005794: Golgi apparatus | 4.04E-03 |
| 34 | GO:0005758: mitochondrial intermembrane space | 4.06E-03 |
| 35 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 5.54E-03 |
| 36 | GO:0016592: mediator complex | 7.89E-03 |
| 37 | GO:0030529: intracellular ribonucleoprotein complex | 9.74E-03 |
| 38 | GO:0005783: endoplasmic reticulum | 1.55E-02 |
| 39 | GO:0031902: late endosome membrane | 1.57E-02 |
| 40 | GO:0090406: pollen tube | 1.66E-02 |
| 41 | GO:0005789: endoplasmic reticulum membrane | 2.02E-02 |
| 42 | GO:0005747: mitochondrial respiratory chain complex I | 2.37E-02 |
| 43 | GO:0005759: mitochondrial matrix | 3.64E-02 |
| 44 | GO:0005622: intracellular | 4.52E-02 |