co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G63060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019593: mannitol biosynthetic process	0.00E+00
2	GO:2000070: regulation of response to water deprivation	1.76E-05
3	GO:0009611: response to wounding	3.99E-05
4	GO:1902039: negative regulation of seed dormancy process	4.74E-05
5	GO:0031407: oxylipin metabolic process	1.17E-04
6	GO:0048838: release of seed from dormancy	1.17E-04
7	GO:1901679: nucleotide transmembrane transport	1.17E-04
8	GO:0031408: oxylipin biosynthetic process	1.42E-04
9	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	2.00E-04
10	GO:0010325: raffinose family oligosaccharide biosynthetic process	2.00E-04
11	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	2.00E-04
12	GO:1902448: positive regulation of shade avoidance	2.00E-04
13	GO:0080121: AMP transport	2.00E-04
14	GO:0080168: abscisic acid transport	2.00E-04
15	GO:0009873: ethylene-activated signaling pathway	2.12E-04
16	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	3.94E-04
17	GO:0045727: positive regulation of translation	3.94E-04
18	GO:0015867: ATP transport	3.94E-04
19	GO:0010029: regulation of seed germination	4.56E-04
20	GO:0015866: ADP transport	6.13E-04
21	GO:0035435: phosphate ion transmembrane transport	6.13E-04
22	GO:0010200: response to chitin	7.24E-04
23	GO:0098655: cation transmembrane transport	7.31E-04
24	GO:0006401: RNA catabolic process	8.54E-04
25	GO:0006955: immune response	8.54E-04
26	GO:1900057: positive regulation of leaf senescence	8.54E-04
27	GO:0051707: response to other organism	8.94E-04
28	GO:0009751: response to salicylic acid	1.10E-03
29	GO:0009753: response to jasmonic acid	1.22E-03
30	GO:0098656: anion transmembrane transport	1.25E-03
31	GO:0010112: regulation of systemic acquired resistance	1.25E-03
32	GO:2000280: regulation of root development	1.40E-03
33	GO:0055062: phosphate ion homeostasis	1.55E-03
34	GO:0010015: root morphogenesis	1.70E-03
35	GO:0005986: sucrose biosynthetic process	2.03E-03
36	GO:0010030: positive regulation of seed germination	2.38E-03
37	GO:0006636: unsaturated fatty acid biosynthetic process	2.56E-03
38	GO:0009695: jasmonic acid biosynthetic process	2.93E-03
39	GO:0009737: response to abscisic acid	3.24E-03
40	GO:0006470: protein dephosphorylation	3.25E-03
41	GO:0001944: vasculature development	3.52E-03
42	GO:0048443: stamen development	3.73E-03
43	GO:0000271: polysaccharide biosynthetic process	4.15E-03
44	GO:0045489: pectin biosynthetic process	4.37E-03
45	GO:0006814: sodium ion transport	4.59E-03
46	GO:0080156: mitochondrial mRNA modification	5.04E-03
47	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	5.04E-03
48	GO:0010193: response to ozone	5.04E-03
49	GO:0071805: potassium ion transmembrane transport	6.00E-03
50	GO:0051607: defense response to virus	6.25E-03
51	GO:0009651: response to salt stress	6.46E-03
52	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	6.75E-03
53	GO:0009816: defense response to bacterium, incompatible interaction	6.75E-03
54	GO:0008152: metabolic process	8.81E-03
55	GO:0045087: innate immune response	9.22E-03
56	GO:0016051: carbohydrate biosynthetic process	9.22E-03
57	GO:0006839: mitochondrial transport	1.01E-02
58	GO:0006855: drug transmembrane transport	1.23E-02
59	GO:0006812: cation transport	1.29E-02
60	GO:0009809: lignin biosynthetic process	1.36E-02
61	GO:0006364: rRNA processing	1.36E-02
62	GO:0006813: potassium ion transport	1.36E-02
63	GO:0009620: response to fungus	1.64E-02
64	GO:0042545: cell wall modification	1.71E-02
65	GO:0006396: RNA processing	1.78E-02
66	GO:0055085: transmembrane transport	1.81E-02
67	GO:0009742: brassinosteroid mediated signaling pathway	1.82E-02
68	GO:0000398: mRNA splicing, via spliceosome	1.93E-02
69	GO:0009790: embryo development	2.29E-02
70	GO:0006633: fatty acid biosynthetic process	2.41E-02
71	GO:0045490: pectin catabolic process	2.57E-02
72	GO:0007623: circadian rhythm	2.57E-02
73	GO:0010150: leaf senescence	2.57E-02
74	GO:0009739: response to gibberellin	2.79E-02
75	GO:0006979: response to oxidative stress	2.91E-02
76	GO:0009617: response to bacterium	2.92E-02
77	GO:0006351: transcription, DNA-templated	3.40E-02
78	GO:0006355: regulation of transcription, DNA-templated	3.48E-02
79	GO:0006970: response to osmotic stress	3.70E-02
80	GO:0009409: response to cold	3.90E-02
81	GO:0009723: response to ethylene	3.90E-02
82	GO:0080167: response to karrikin	4.09E-02
83	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.19E-02

Rank	GO Term	Adjusted P value
1	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
2	GO:0016629: 12-oxophytodienoate reductase activity	1.38E-07
3	GO:0090440: abscisic acid transporter activity	4.74E-05
4	GO:0001047: core promoter binding	1.17E-04
5	GO:0042389: omega-3 fatty acid desaturase activity	1.17E-04
6	GO:0004383: guanylate cyclase activity	2.00E-04
7	GO:0047274: galactinol-sucrose galactosyltransferase activity	2.00E-04
8	GO:0010181: FMN binding	2.59E-04
9	GO:0015297: antiporter activity	2.85E-04
10	GO:0001653: peptide receptor activity	2.94E-04
11	GO:0005432: calcium:sodium antiporter activity	2.94E-04
12	GO:0010178: IAA-amino acid conjugate hydrolase activity	2.94E-04
13	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	5.00E-04
14	GO:0080122: AMP transmembrane transporter activity	5.00E-04
15	GO:0015217: ADP transmembrane transporter activity	7.31E-04
16	GO:0005347: ATP transmembrane transporter activity	7.31E-04
17	GO:0016621: cinnamoyl-CoA reductase activity	8.54E-04
18	GO:0004722: protein serine/threonine phosphatase activity	9.71E-04
19	GO:0015491: cation:cation antiporter activity	9.81E-04
20	GO:0004564: beta-fructofuranosidase activity	9.81E-04
21	GO:0005267: potassium channel activity	1.11E-03
22	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.11E-03
23	GO:0004575: sucrose alpha-glucosidase activity	1.40E-03
24	GO:0015114: phosphate ion transmembrane transporter activity	2.03E-03
25	GO:0000175: 3'-5'-exoribonuclease activity	2.03E-03
26	GO:0004540: ribonuclease activity	3.12E-03
27	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	3.32E-03
28	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	6.00E-03
29	GO:0008237: metallopeptidase activity	6.00E-03
30	GO:0004004: ATP-dependent RNA helicase activity	7.28E-03
31	GO:0015238: drug transmembrane transporter activity	8.09E-03
32	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.31E-02
33	GO:0045330: aspartyl esterase activity	1.46E-02
34	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.64E-02
35	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.64E-02
36	GO:0030599: pectinesterase activity	1.67E-02
37	GO:0004386: helicase activity	1.86E-02
38	GO:0003677: DNA binding	1.87E-02
39	GO:0016758: transferase activity, transferring hexosyl groups	2.01E-02
40	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.09E-02
41	GO:0004252: serine-type endopeptidase activity	2.20E-02
42	GO:0046910: pectinesterase inhibitor activity	2.45E-02
43	GO:0044212: transcription regulatory region DNA binding	2.89E-02
44	GO:0004842: ubiquitin-protein transferase activity	3.98E-02
45	GO:0004497: monooxygenase activity	4.09E-02
46	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0042170: plastid membrane	1.17E-04
2	GO:0000178: exosome (RNase complex)	5.00E-04
3	GO:0005770: late endosome	4.37E-03
4	GO:0071944: cell periphery	5.52E-03
5	GO:0005778: peroxisomal membrane	6.00E-03
6	GO:0000932: P-body	6.50E-03
7	GO:0005788: endoplasmic reticulum lumen	6.75E-03
8	GO:0031902: late endosome membrane	1.04E-02
9	GO:0009706: chloroplast inner membrane	1.75E-02
10	GO:0005737: cytoplasm	1.90E-02
11	GO:0005874: microtubule	4.00E-02