co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G62810

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009236: cobalamin biosynthetic process	0.00E+00
2	GO:0009853: photorespiration	3.19E-13
3	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	1.16E-11
4	GO:0055114: oxidation-reduction process	3.26E-07
5	GO:0015991: ATP hydrolysis coupled proton transport	8.72E-05
6	GO:0006662: glycerol ether metabolic process	9.76E-05
7	GO:0015986: ATP synthesis coupled proton transport	1.09E-04
8	GO:0019354: siroheme biosynthetic process	1.73E-04
9	GO:0031468: nuclear envelope reassembly	1.73E-04
10	GO:0009245: lipid A biosynthetic process	2.02E-04
11	GO:0045454: cell redox homeostasis	2.91E-04
12	GO:0046939: nucleotide phosphorylation	3.92E-04
13	GO:0006099: tricarboxylic acid cycle	4.64E-04
14	GO:0034599: cellular response to oxidative stress	4.64E-04
15	GO:0045793: positive regulation of cell size	6.40E-04
16	GO:0006760: folic acid-containing compound metabolic process	6.40E-04
17	GO:0006487: protein N-linked glycosylation	6.71E-04
18	GO:0015992: proton transport	8.10E-04
19	GO:0032877: positive regulation of DNA endoreduplication	9.13E-04
20	GO:0006107: oxaloacetate metabolic process	9.13E-04
21	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	9.13E-04
22	GO:1901332: negative regulation of lateral root development	9.13E-04
23	GO:0051781: positive regulation of cell division	1.21E-03
24	GO:0032366: intracellular sterol transport	1.21E-03
25	GO:0006555: methionine metabolic process	1.89E-03
26	GO:0043248: proteasome assembly	1.89E-03
27	GO:0007035: vacuolar acidification	1.89E-03
28	GO:0019509: L-methionine salvage from methylthioadenosine	2.27E-03
29	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.67E-03
30	GO:0022904: respiratory electron transport chain	2.67E-03
31	GO:0048658: anther wall tapetum development	3.09E-03
32	GO:0009231: riboflavin biosynthetic process	3.09E-03
33	GO:0000028: ribosomal small subunit assembly	3.09E-03
34	GO:0022900: electron transport chain	3.54E-03
35	GO:0006412: translation	3.65E-03
36	GO:0046685: response to arsenic-containing substance	4.00E-03
37	GO:0080144: amino acid homeostasis	4.00E-03
38	GO:0006754: ATP biosynthetic process	4.00E-03
39	GO:0043069: negative regulation of programmed cell death	4.99E-03
40	GO:0000103: sulfate assimilation	4.99E-03
41	GO:0016925: protein sumoylation	6.06E-03
42	GO:0006807: nitrogen compound metabolic process	6.61E-03
43	GO:0006108: malate metabolic process	6.61E-03
44	GO:0006006: glucose metabolic process	6.61E-03
45	GO:0007030: Golgi organization	7.79E-03
46	GO:0010039: response to iron ion	7.79E-03
47	GO:0006406: mRNA export from nucleus	9.03E-03
48	GO:0051302: regulation of cell division	9.69E-03
49	GO:0061077: chaperone-mediated protein folding	1.03E-02
50	GO:0009651: response to salt stress	1.16E-02
51	GO:0080022: primary root development	1.39E-02
52	GO:0034220: ion transmembrane transport	1.39E-02
53	GO:0006633: fatty acid biosynthetic process	1.47E-02
54	GO:0061025: membrane fusion	1.54E-02
55	GO:0010193: response to ozone	1.70E-02
56	GO:0000302: response to reactive oxygen species	1.70E-02
57	GO:0009735: response to cytokinin	1.88E-02
58	GO:0010286: heat acclimation	2.04E-02
59	GO:0000910: cytokinesis	2.12E-02
60	GO:0006950: response to stress	2.48E-02
61	GO:0042254: ribosome biogenesis	2.56E-02
62	GO:0010311: lateral root formation	2.77E-02
63	GO:0006499: N-terminal protein myristoylation	2.87E-02
64	GO:0000724: double-strand break repair via homologous recombination	3.06E-02
65	GO:0016192: vesicle-mediated transport	3.27E-02
66	GO:0045892: negative regulation of transcription, DNA-templated	3.78E-02
67	GO:0009926: auxin polar transport	3.79E-02
68	GO:0006886: intracellular protein transport	3.83E-02
69	GO:0006486: protein glycosylation	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0050152: omega-amidase activity	0.00E+00
2	GO:0051266: sirohydrochlorin ferrochelatase activity	0.00E+00
3	GO:0004746: riboflavin synthase activity	0.00E+00
4	GO:0016852: sirohydrochlorin cobaltochelatase activity	0.00E+00
5	GO:0008137: NADH dehydrogenase (ubiquinone) activity	2.22E-09
6	GO:0004129: cytochrome-c oxidase activity	1.24E-07
7	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.31E-06
8	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	3.43E-06
9	GO:0008794: arsenate reductase (glutaredoxin) activity	9.78E-06
10	GO:0015035: protein disulfide oxidoreductase activity	1.56E-05
11	GO:0004576: oligosaccharyl transferase activity	2.30E-05
12	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.73E-05
13	GO:0031177: phosphopantetheine binding	5.54E-05
14	GO:0000035: acyl binding	7.74E-05
15	GO:0047134: protein-disulfide reductase activity	7.75E-05
16	GO:0004791: thioredoxin-disulfide reductase activity	1.09E-04
17	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.32E-04
18	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.61E-04
19	GO:0015078: hydrogen ion transmembrane transporter activity	1.65E-04
20	GO:0030611: arsenate reductase activity	1.73E-04
21	GO:0046961: proton-transporting ATPase activity, rotational mechanism	3.31E-04
22	GO:0003735: structural constituent of ribosome	3.59E-04
23	GO:0004089: carbonate dehydratase activity	4.32E-04
24	GO:0051539: 4 iron, 4 sulfur cluster binding	5.19E-04
25	GO:0008430: selenium binding	6.40E-04
26	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	6.40E-04
27	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	9.13E-04
28	GO:0019201: nucleotide kinase activity	9.13E-04
29	GO:0010011: auxin binding	1.21E-03
30	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	1.21E-03
31	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.21E-03
32	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.21E-03
33	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.54E-03
34	GO:0005496: steroid binding	1.54E-03
35	GO:0031386: protein tag	1.54E-03
36	GO:0051117: ATPase binding	1.89E-03
37	GO:0004017: adenylate kinase activity	2.27E-03
38	GO:0008320: protein transmembrane transporter activity	2.67E-03
39	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.09E-03
40	GO:0050897: cobalt ion binding	3.45E-03
41	GO:0045309: protein phosphorylated amino acid binding	4.49E-03
42	GO:0051537: 2 iron, 2 sulfur cluster binding	5.26E-03
43	GO:0019904: protein domain specific binding	5.52E-03
44	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.67E-03
45	GO:0004725: protein tyrosine phosphatase activity	8.41E-03
46	GO:0051536: iron-sulfur cluster binding	9.03E-03
47	GO:0043130: ubiquitin binding	9.03E-03
48	GO:0005528: FK506 binding	9.03E-03
49	GO:0019843: rRNA binding	1.17E-02
50	GO:0016853: isomerase activity	1.54E-02
51	GO:0004872: receptor activity	1.62E-02
52	GO:0015250: water channel activity	2.21E-02
53	GO:0005507: copper ion binding	3.27E-02
54	GO:0050661: NADP binding	3.47E-02
55	GO:0051287: NAD binding	4.34E-02
56	GO:0009055: electron carrier activity	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0016469: proton-transporting two-sector ATPase complex	0.00E+00
2	GO:0000274: mitochondrial proton-transporting ATP synthase, stator stalk	0.00E+00
3	GO:0005747: mitochondrial respiratory chain complex I	4.58E-28
4	GO:0045271: respiratory chain complex I	5.02E-17
5	GO:0031966: mitochondrial membrane	3.31E-12
6	GO:0005739: mitochondrion	2.33E-11
7	GO:0005750: mitochondrial respiratory chain complex III	3.46E-09
8	GO:0005753: mitochondrial proton-transporting ATP synthase complex	4.90E-09
9	GO:0045273: respiratory chain complex II	2.01E-06
10	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	2.01E-06
11	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	2.30E-05
12	GO:0005774: vacuolar membrane	2.64E-05
13	GO:0005758: mitochondrial intermembrane space	3.31E-05
14	GO:0008250: oligosaccharyltransferase complex	3.73E-05
15	GO:0022626: cytosolic ribosome	2.32E-04
16	GO:0005751: mitochondrial respiratory chain complex IV	6.40E-04
17	GO:0022627: cytosolic small ribosomal subunit	6.76E-04
18	GO:0070469: respiratory chain	7.39E-04
19	GO:0009507: chloroplast	7.93E-04
20	GO:0016020: membrane	8.84E-04
21	GO:0000276: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	9.13E-04
22	GO:0033180: proton-transporting V-type ATPase, V1 domain	9.13E-04
23	GO:1990726: Lsm1-7-Pat1 complex	9.13E-04
24	GO:0005783: endoplasmic reticulum	9.89E-04
25	GO:0005840: ribosome	1.18E-03
26	GO:0016471: vacuolar proton-transporting V-type ATPase complex	1.21E-03
27	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.21E-03
28	GO:0005829: cytosol	1.31E-03
29	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	1.54E-03
30	GO:0005746: mitochondrial respiratory chain	1.54E-03
31	GO:0009536: plastid	1.61E-03
32	GO:0005759: mitochondrial matrix	2.41E-03
33	GO:0005788: endoplasmic reticulum lumen	2.43E-03
34	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.67E-03
35	GO:0005688: U6 snRNP	3.09E-03
36	GO:0046540: U4/U6 x U5 tri-snRNP complex	3.54E-03
37	GO:0005773: vacuole	3.81E-03
38	GO:0005763: mitochondrial small ribosomal subunit	4.00E-03
39	GO:0071011: precatalytic spliceosome	4.49E-03
40	GO:0005740: mitochondrial envelope	4.99E-03
41	GO:0008541: proteasome regulatory particle, lid subcomplex	5.52E-03
42	GO:0071013: catalytic step 2 spliceosome	5.52E-03
43	GO:0015935: small ribosomal subunit	1.03E-02
44	GO:0032580: Golgi cisterna membrane	1.95E-02
45	GO:0000932: P-body	2.21E-02
46	GO:0015934: large ribosomal subunit	2.96E-02
47	GO:0000325: plant-type vacuole	2.96E-02
48	GO:0005730: nucleolus	3.23E-02
49	GO:0000502: proteasome complex	4.68E-02
50	GO:0005635: nuclear envelope	4.91E-02