GO Enrichment Analysis of Co-expressed Genes with
AT3G62360
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007160: cell-matrix adhesion | 0.00E+00 |
| 2 | GO:0006144: purine nucleobase metabolic process | 1.97E-05 |
| 3 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.97E-05 |
| 4 | GO:0019628: urate catabolic process | 1.97E-05 |
| 5 | GO:0006487: protein N-linked glycosylation | 3.24E-05 |
| 6 | GO:0045859: regulation of protein kinase activity | 5.10E-05 |
| 7 | GO:0006511: ubiquitin-dependent protein catabolic process | 8.83E-05 |
| 8 | GO:0030163: protein catabolic process | 1.07E-04 |
| 9 | GO:0001676: long-chain fatty acid metabolic process | 1.36E-04 |
| 10 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 1.36E-04 |
| 11 | GO:0010483: pollen tube reception | 1.86E-04 |
| 12 | GO:0018279: protein N-linked glycosylation via asparagine | 2.40E-04 |
| 13 | GO:0036065: fucosylation | 2.40E-04 |
| 14 | GO:0045040: protein import into mitochondrial outer membrane | 2.97E-04 |
| 15 | GO:0042176: regulation of protein catabolic process | 2.97E-04 |
| 16 | GO:0000338: protein deneddylation | 4.19E-04 |
| 17 | GO:0048316: seed development | 5.01E-04 |
| 18 | GO:0007275: multicellular organism development | 5.25E-04 |
| 19 | GO:0043562: cellular response to nitrogen levels | 5.50E-04 |
| 20 | GO:0010208: pollen wall assembly | 5.50E-04 |
| 21 | GO:0043067: regulation of programmed cell death | 6.90E-04 |
| 22 | GO:0006298: mismatch repair | 7.62E-04 |
| 23 | GO:0010072: primary shoot apical meristem specification | 8.37E-04 |
| 24 | GO:0006312: mitotic recombination | 9.12E-04 |
| 25 | GO:0010102: lateral root morphogenesis | 9.90E-04 |
| 26 | GO:0048768: root hair cell tip growth | 1.07E-03 |
| 27 | GO:0009969: xyloglucan biosynthetic process | 1.15E-03 |
| 28 | GO:0007031: peroxisome organization | 1.15E-03 |
| 29 | GO:0034976: response to endoplasmic reticulum stress | 1.23E-03 |
| 30 | GO:0080147: root hair cell development | 1.32E-03 |
| 31 | GO:0006418: tRNA aminoacylation for protein translation | 1.41E-03 |
| 32 | GO:0015992: proton transport | 1.50E-03 |
| 33 | GO:0042147: retrograde transport, endosome to Golgi | 1.88E-03 |
| 34 | GO:0008033: tRNA processing | 1.98E-03 |
| 35 | GO:0010051: xylem and phloem pattern formation | 1.98E-03 |
| 36 | GO:0010154: fruit development | 2.08E-03 |
| 37 | GO:0010193: response to ozone | 2.40E-03 |
| 38 | GO:0042128: nitrate assimilation | 3.31E-03 |
| 39 | GO:0009832: plant-type cell wall biogenesis | 3.80E-03 |
| 40 | GO:0048767: root hair elongation | 3.80E-03 |
| 41 | GO:0010043: response to zinc ion | 4.06E-03 |
| 42 | GO:0009867: jasmonic acid mediated signaling pathway | 4.32E-03 |
| 43 | GO:0006887: exocytosis | 4.86E-03 |
| 44 | GO:0006631: fatty acid metabolic process | 4.86E-03 |
| 45 | GO:0009744: response to sucrose | 5.13E-03 |
| 46 | GO:0009640: photomorphogenesis | 5.13E-03 |
| 47 | GO:0006486: protein glycosylation | 6.31E-03 |
| 48 | GO:0009585: red, far-red light phototransduction | 6.31E-03 |
| 49 | GO:0009845: seed germination | 9.96E-03 |
| 50 | GO:0009790: embryo development | 1.05E-02 |
| 51 | GO:0006633: fatty acid biosynthetic process | 1.11E-02 |
| 52 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.28E-02 |
| 53 | GO:0016192: vesicle-mediated transport | 1.94E-02 |
| 54 | GO:0045454: cell redox homeostasis | 2.13E-02 |
| 55 | GO:0045892: negative regulation of transcription, DNA-templated | 2.15E-02 |
| 56 | GO:0006886: intracellular protein transport | 2.18E-02 |
| 57 | GO:0032259: methylation | 2.40E-02 |
| 58 | GO:0009735: response to cytokinin | 3.49E-02 |
| 59 | GO:0009555: pollen development | 3.72E-02 |
| 60 | GO:0006457: protein folding | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0055105: ubiquitin-protein transferase inhibitor activity | 0.00E+00 |
| 2 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 3 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 9.89E-07 |
| 4 | GO:0015157: oligosaccharide transmembrane transporter activity | 1.97E-05 |
| 5 | GO:0004830: tryptophan-tRNA ligase activity | 1.97E-05 |
| 6 | GO:0004679: AMP-activated protein kinase activity | 1.97E-05 |
| 7 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 1.36E-04 |
| 8 | GO:0031593: polyubiquitin binding | 2.97E-04 |
| 9 | GO:0030983: mismatched DNA binding | 2.97E-04 |
| 10 | GO:0019887: protein kinase regulator activity | 3.57E-04 |
| 11 | GO:0102391: decanoate--CoA ligase activity | 3.57E-04 |
| 12 | GO:0004467: long-chain fatty acid-CoA ligase activity | 4.19E-04 |
| 13 | GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity | 4.19E-04 |
| 14 | GO:0004427: inorganic diphosphatase activity | 4.19E-04 |
| 15 | GO:0030674: protein binding, bridging | 4.84E-04 |
| 16 | GO:0008417: fucosyltransferase activity | 6.19E-04 |
| 17 | GO:0030234: enzyme regulator activity | 7.62E-04 |
| 18 | GO:0005515: protein binding | 1.46E-03 |
| 19 | GO:0003756: protein disulfide isomerase activity | 1.78E-03 |
| 20 | GO:0004812: aminoacyl-tRNA ligase activity | 1.88E-03 |
| 21 | GO:0010181: FMN binding | 2.18E-03 |
| 22 | GO:0016887: ATPase activity | 4.11E-03 |
| 23 | GO:0003746: translation elongation factor activity | 4.32E-03 |
| 24 | GO:0003697: single-stranded DNA binding | 4.32E-03 |
| 25 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.72E-03 |
| 26 | GO:0005509: calcium ion binding | 8.76E-03 |
| 27 | GO:0016829: lyase activity | 9.96E-03 |
| 28 | GO:0008565: protein transporter activity | 1.07E-02 |
| 29 | GO:0008168: methyltransferase activity | 1.57E-02 |
| 30 | GO:0042803: protein homodimerization activity | 2.20E-02 |
| 31 | GO:0016757: transferase activity, transferring glycosyl groups | 3.25E-02 |
| 32 | GO:0000166: nucleotide binding | 3.72E-02 |
| 33 | GO:0016740: transferase activity | 4.29E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008305: integrin complex | 0.00E+00 |
| 2 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 3 | GO:0008541: proteasome regulatory particle, lid subcomplex | 6.13E-08 |
| 4 | GO:0008250: oligosaccharyltransferase complex | 9.89E-07 |
| 5 | GO:0000502: proteasome complex | 1.50E-05 |
| 6 | GO:0032389: MutLalpha complex | 1.97E-05 |
| 7 | GO:0005712: chiasma | 1.97E-05 |
| 8 | GO:0046861: glyoxysomal membrane | 9.05E-05 |
| 9 | GO:0005783: endoplasmic reticulum | 1.35E-04 |
| 10 | GO:0000795: synaptonemal complex | 2.40E-04 |
| 11 | GO:0005829: cytosol | 2.65E-04 |
| 12 | GO:0030904: retromer complex | 2.97E-04 |
| 13 | GO:0031595: nuclear proteasome complex | 4.19E-04 |
| 14 | GO:0000326: protein storage vacuole | 5.50E-04 |
| 15 | GO:0009514: glyoxysome | 5.50E-04 |
| 16 | GO:0005742: mitochondrial outer membrane translocase complex | 5.50E-04 |
| 17 | GO:0008180: COP9 signalosome | 6.19E-04 |
| 18 | GO:0005794: Golgi apparatus | 9.76E-04 |
| 19 | GO:0005774: vacuolar membrane | 1.22E-03 |
| 20 | GO:0005769: early endosome | 1.23E-03 |
| 21 | GO:0000790: nuclear chromatin | 1.88E-03 |
| 22 | GO:0032580: Golgi cisterna membrane | 2.73E-03 |
| 23 | GO:0005788: endoplasmic reticulum lumen | 3.19E-03 |
| 24 | GO:0031902: late endosome membrane | 4.86E-03 |
| 25 | GO:0005777: peroxisome | 5.39E-03 |
| 26 | GO:0005886: plasma membrane | 6.03E-03 |
| 27 | GO:0005802: trans-Golgi network | 7.52E-03 |
| 28 | GO:0005623: cell | 9.60E-03 |
| 29 | GO:0005773: vacuole | 1.13E-02 |
| 30 | GO:0009505: plant-type cell wall | 1.19E-02 |
| 31 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.72E-02 |
| 32 | GO:0009579: thylakoid | 4.23E-02 |