Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G61960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0016236: macroautophagy0.00E+00
2GO:0006592: ornithine biosynthetic process0.00E+00
3GO:0044376: RNA polymerase II complex import to nucleus2.41E-05
4GO:0010265: SCF complex assembly2.41E-05
5GO:0006474: N-terminal protein amino acid acetylation2.41E-05
6GO:0030242: pexophagy2.41E-05
7GO:1990022: RNA polymerase III complex localization to nucleus2.41E-05
8GO:0001736: establishment of planar polarity6.16E-05
9GO:0006695: cholesterol biosynthetic process6.16E-05
10GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.09E-04
11GO:0051259: protein oligomerization1.62E-04
12GO:0045324: late endosome to vacuole transport2.21E-04
13GO:2000762: regulation of phenylpropanoid metabolic process2.84E-04
14GO:0006526: arginine biosynthetic process6.45E-04
15GO:0006002: fructose 6-phosphate metabolic process6.45E-04
16GO:0006075: (1->3)-beta-D-glucan biosynthetic process6.45E-04
17GO:0048765: root hair cell differentiation9.78E-04
18GO:0009698: phenylpropanoid metabolic process9.78E-04
19GO:0052544: defense response by callose deposition in cell wall9.78E-04
20GO:0009725: response to hormone1.16E-03
21GO:0002237: response to molecule of bacterial origin1.25E-03
22GO:0010053: root epidermal cell differentiation1.35E-03
23GO:0016575: histone deacetylation1.65E-03
24GO:0031348: negative regulation of defense response1.87E-03
25GO:0001944: vasculature development1.98E-03
26GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.21E-03
27GO:0010051: xylem and phloem pattern formation2.33E-03
28GO:0008360: regulation of cell shape2.45E-03
29GO:0010182: sugar mediated signaling pathway2.45E-03
30GO:0006623: protein targeting to vacuole2.70E-03
31GO:0016132: brassinosteroid biosynthetic process2.82E-03
32GO:0071281: cellular response to iron ion3.08E-03
33GO:0010286: heat acclimation3.35E-03
34GO:0016126: sterol biosynthetic process3.63E-03
35GO:0006950: response to stress4.05E-03
36GO:0008219: cell death4.34E-03
37GO:0010311: lateral root formation4.49E-03
38GO:0010119: regulation of stomatal movement4.80E-03
39GO:0009926: auxin polar transport6.08E-03
40GO:0051707: response to other organism6.08E-03
41GO:0051301: cell division6.55E-03
42GO:0009846: pollen germination7.11E-03
43GO:0009736: cytokinin-activated signaling pathway7.47E-03
44GO:0006096: glycolytic process8.40E-03
45GO:0009626: plant-type hypersensitive response8.77E-03
46GO:0042742: defense response to bacterium1.22E-02
47GO:0006979: response to oxidative stress1.23E-02
48GO:0009790: embryo development1.25E-02
49GO:0010150: leaf senescence1.40E-02
50GO:0010228: vegetative to reproductive phase transition of meristem1.45E-02
51GO:0009617: response to bacterium1.59E-02
52GO:0005975: carbohydrate metabolic process1.86E-02
53GO:0009826: unidimensional cell growth1.86E-02
54GO:0006970: response to osmotic stress2.02E-02
55GO:0009723: response to ethylene2.12E-02
56GO:0080167: response to karrikin2.23E-02
57GO:0045454: cell redox homeostasis2.54E-02
58GO:0009408: response to heat2.95E-02
59GO:0009753: response to jasmonic acid3.10E-02
60GO:0009873: ethylene-activated signaling pathway3.54E-02
61GO:0006508: proteolysis3.75E-02
62GO:0009734: auxin-activated signaling pathway3.76E-02
63GO:0009555: pollen development4.43E-02
RankGO TermAdjusted P value
1GO:0008777: acetylornithine deacetylase activity0.00E+00
2GO:0047598: 7-dehydrocholesterol reductase activity0.00E+00
3GO:0009918: sterol delta7 reductase activity0.00E+00
4GO:0030544: Hsp70 protein binding2.41E-05
5GO:0004596: peptide alpha-N-acetyltransferase activity6.16E-05
6GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.62E-04
7GO:0004040: amidase activity2.84E-04
8GO:0031593: polyubiquitin binding3.51E-04
9GO:0003872: 6-phosphofructokinase activity4.92E-04
10GO:0003843: 1,3-beta-D-glucan synthase activity6.45E-04
11GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)6.45E-04
12GO:0004521: endoribonuclease activity1.07E-03
13GO:0003712: transcription cofactor activity1.35E-03
14GO:0004190: aspartic-type endopeptidase activity1.35E-03
15GO:0004407: histone deacetylase activity1.55E-03
16GO:0043130: ubiquitin binding1.55E-03
17GO:0008080: N-acetyltransferase activity2.45E-03
18GO:0001085: RNA polymerase II transcription factor binding2.45E-03
19GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.08E-03
20GO:0008237: metallopeptidase activity3.35E-03
21GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding4.80E-03
22GO:0000166: nucleotide binding6.02E-03
23GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds7.94E-03
24GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.23E-02
25GO:0003682: chromatin binding1.99E-02
26GO:0043531: ADP binding2.04E-02
27GO:0003924: GTPase activity2.95E-02
28GO:0016757: transferase activity, transferring glycosyl groups4.15E-02
RankGO TermAdjusted P value
1GO:0071561: nucleus-vacuole junction0.00E+00
2GO:0031417: NatC complex0.00E+00
3GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I2.41E-05
4GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II2.41E-05
5GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.93E-04
6GO:0005945: 6-phosphofructokinase complex2.84E-04
7GO:0000148: 1,3-beta-D-glucan synthase complex6.45E-04
8GO:0030176: integral component of endoplasmic reticulum membrane1.35E-03
9GO:0005770: late endosome2.45E-03
10GO:0009504: cell plate2.70E-03
11GO:0005667: transcription factor complex3.90E-03
12GO:0005643: nuclear pore4.34E-03
13GO:0005789: endoplasmic reticulum membrane1.87E-02
14GO:0005874: microtubule2.18E-02
15GO:0005829: cytosol4.61E-02
16GO:0009506: plasmodesma4.84E-02
<
Gene type



Gene DE type