Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G61930

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006593: ornithine catabolic process0.00E+00
2GO:1903647: negative regulation of chlorophyll catabolic process0.00E+00
3GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
4GO:0042430: indole-containing compound metabolic process0.00E+00
5GO:0046177: D-gluconate catabolic process0.00E+00
6GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
7GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase0.00E+00
8GO:0055114: oxidation-reduction process7.95E-06
9GO:0009852: auxin catabolic process2.19E-05
10GO:0019544: arginine catabolic process to glutamate2.19E-05
11GO:0006148: inosine catabolic process2.19E-05
12GO:0005975: carbohydrate metabolic process4.90E-05
13GO:0009915: phloem sucrose loading5.64E-05
14GO:0044746: amino acid transmembrane export9.94E-05
15GO:0051646: mitochondrion localization9.94E-05
16GO:0006081: cellular aldehyde metabolic process9.94E-05
17GO:1901657: glycosyl compound metabolic process1.23E-04
18GO:0009816: defense response to bacterium, incompatible interaction1.69E-04
19GO:0042732: D-xylose metabolic process3.24E-04
20GO:0002238: response to molecule of fungal origin3.24E-04
21GO:0006561: proline biosynthetic process3.24E-04
22GO:0006121: mitochondrial electron transport, succinate to ubiquinone3.24E-04
23GO:0006120: mitochondrial electron transport, NADH to ubiquinone3.89E-04
24GO:0010189: vitamin E biosynthetic process3.89E-04
25GO:0022904: respiratory electron transport chain4.56E-04
26GO:0009809: lignin biosynthetic process4.67E-04
27GO:0015996: chlorophyll catabolic process5.98E-04
28GO:0006098: pentose-phosphate shunt6.71E-04
29GO:0009060: aerobic respiration6.71E-04
30GO:0048354: mucilage biosynthetic process involved in seed coat development7.48E-04
31GO:0010192: mucilage biosynthetic process8.27E-04
32GO:0009684: indoleacetic acid biosynthetic process9.07E-04
33GO:0042744: hydrogen peroxide catabolic process9.19E-04
34GO:0012501: programmed cell death9.89E-04
35GO:0002213: defense response to insect9.89E-04
36GO:0009725: response to hormone1.07E-03
37GO:0046274: lignin catabolic process1.07E-03
38GO:0010150: leaf senescence1.10E-03
39GO:0009266: response to temperature stimulus1.16E-03
40GO:0002237: response to molecule of bacterial origin1.16E-03
41GO:0042343: indole glucosinolate metabolic process1.25E-03
42GO:0019762: glucosinolate catabolic process1.34E-03
43GO:0006636: unsaturated fatty acid biosynthetic process1.34E-03
44GO:0009833: plant-type primary cell wall biogenesis1.34E-03
45GO:0009651: response to salt stress1.42E-03
46GO:0048511: rhythmic process1.63E-03
47GO:0098542: defense response to other organism1.63E-03
48GO:0009269: response to desiccation1.63E-03
49GO:0009625: response to insect1.83E-03
50GO:0000271: polysaccharide biosynthetic process2.15E-03
51GO:0044550: secondary metabolite biosynthetic process2.24E-03
52GO:0010154: fruit development2.26E-03
53GO:0010252: auxin homeostasis2.97E-03
54GO:0030244: cellulose biosynthetic process4.00E-03
55GO:0008219: cell death4.00E-03
56GO:0009813: flavonoid biosynthetic process4.14E-03
57GO:0009853: photorespiration4.70E-03
58GO:0006099: tricarboxylic acid cycle4.85E-03
59GO:0042542: response to hydrogen peroxide5.45E-03
60GO:0009611: response to wounding5.46E-03
61GO:0031347: regulation of defense response6.39E-03
62GO:0042538: hyperosmotic salinity response6.55E-03
63GO:0048316: seed development7.90E-03
64GO:0009626: plant-type hypersensitive response8.08E-03
65GO:0009624: response to nematode8.79E-03
66GO:0071555: cell wall organization1.08E-02
67GO:0006979: response to oxidative stress1.09E-02
68GO:0009617: response to bacterium1.46E-02
69GO:0009751: response to salicylic acid2.68E-02
70GO:0008152: metabolic process2.90E-02
71GO:0009908: flower development3.79E-02
72GO:0009735: response to cytokinin3.82E-02
RankGO TermAdjusted P value
1GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
2GO:0009045: xylose isomerase activity0.00E+00
3GO:0046316: gluconokinase activity0.00E+00
4GO:0047782: coniferin beta-glucosidase activity0.00E+00
5GO:0032441: pheophorbide a oxygenase activity0.00E+00
6GO:0010176: homogentisate phytyltransferase activity0.00E+00
7GO:0102483: scopolin beta-glucosidase activity4.07E-06
8GO:0008422: beta-glucosidase activity8.52E-06
9GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity2.19E-05
10GO:0045437: uridine nucleosidase activity2.19E-05
11GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor2.19E-05
12GO:0047724: inosine nucleosidase activity5.64E-05
13GO:0047517: 1,4-beta-D-xylan synthase activity5.64E-05
14GO:0080109: indole-3-acetonitrile nitrile hydratase activity5.64E-05
15GO:0010277: chlorophyllide a oxygenase [overall] activity9.94E-05
16GO:0080061: indole-3-acetonitrile nitrilase activity9.94E-05
17GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity9.94E-05
18GO:0015186: L-glutamine transmembrane transporter activity1.49E-04
19GO:0000257: nitrilase activity1.49E-04
20GO:0051213: dioxygenase activity1.59E-04
21GO:0050302: indole-3-acetaldehyde oxidase activity2.04E-04
22GO:0004659: prenyltransferase activity2.04E-04
23GO:0000104: succinate dehydrogenase activity2.62E-04
24GO:0008177: succinate dehydrogenase (ubiquinone) activity2.62E-04
25GO:0051538: 3 iron, 4 sulfur cluster binding2.62E-04
26GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.70E-04
27GO:0004029: aldehyde dehydrogenase (NAD) activity3.24E-04
28GO:0004462: lactoylglutathione lyase activity3.24E-04
29GO:0004866: endopeptidase inhibitor activity3.24E-04
30GO:0051537: 2 iron, 2 sulfur cluster binding3.77E-04
31GO:0020037: heme binding4.58E-04
32GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity7.48E-04
33GO:0004568: chitinase activity8.27E-04
34GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds9.48E-04
35GO:0052716: hydroquinone:oxygen oxidoreductase activity9.89E-04
36GO:0004867: serine-type endopeptidase inhibitor activity1.25E-03
37GO:0051536: iron-sulfur cluster binding1.43E-03
38GO:0046872: metal ion binding1.51E-03
39GO:0035251: UDP-glucosyltransferase activity1.63E-03
40GO:0004601: peroxidase activity1.67E-03
41GO:0016760: cellulose synthase (UDP-forming) activity1.83E-03
42GO:0008137: NADH dehydrogenase (ubiquinone) activity2.61E-03
43GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.66E-03
44GO:0016759: cellulose synthase activity2.97E-03
45GO:0016722: oxidoreductase activity, oxidizing metal ions3.09E-03
46GO:0009055: electron carrier activity3.24E-03
47GO:0051539: 4 iron, 4 sulfur cluster binding5.15E-03
48GO:0005507: copper ion binding7.59E-03
49GO:0019825: oxygen binding7.59E-03
50GO:0005506: iron ion binding1.06E-02
51GO:0016829: lyase activity1.09E-02
52GO:0030170: pyridoxal phosphate binding1.11E-02
53GO:0008194: UDP-glycosyltransferase activity1.40E-02
54GO:0016491: oxidoreductase activity1.43E-02
55GO:0042802: identical protein binding1.53E-02
56GO:0050660: flavin adenine dinucleotide binding1.95E-02
57GO:0004497: monooxygenase activity2.05E-02
58GO:0008270: zinc ion binding2.99E-02
59GO:0016757: transferase activity, transferring glycosyl groups3.69E-02
60GO:0016740: transferase activity4.69E-02
RankGO TermAdjusted P value
1GO:0045281: succinate dehydrogenase complex5.64E-05
2GO:0055035: plastid thylakoid membrane2.62E-04
3GO:0045273: respiratory chain complex II5.25E-04
4GO:0005759: mitochondrial matrix1.01E-03
5GO:0005758: mitochondrial intermembrane space1.43E-03
6GO:0045271: respiratory chain complex I1.53E-03
7GO:0005576: extracellular region1.53E-03
8GO:0005794: Golgi apparatus4.90E-03
9GO:0031966: mitochondrial membrane6.55E-03
10GO:0005747: mitochondrial respiratory chain complex I7.90E-03
11GO:0009706: chloroplast inner membrane8.79E-03
12GO:0005773: vacuole1.33E-02
13GO:0005783: endoplasmic reticulum1.88E-02
14GO:0031969: chloroplast membrane2.05E-02
15GO:0005743: mitochondrial inner membrane2.57E-02
16GO:0005737: cytoplasm4.00E-02
17GO:0005777: peroxisome4.49E-02
18GO:0009534: chloroplast thylakoid4.66E-02
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Gene type



Gene DE type