Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G61540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019279: L-methionine biosynthetic process from L-homoserine via cystathionine0.00E+00
2GO:0010477: response to sulfur dioxide0.00E+00
3GO:0019343: cysteine biosynthetic process via cystathionine1.21E-06
4GO:0071266: 'de novo' L-methionine biosynthetic process1.21E-06
5GO:0019346: transsulfuration1.21E-06
6GO:0006013: mannose metabolic process6.60E-06
7GO:0046653: tetrahydrofolate metabolic process1.06E-05
8GO:0015994: chlorophyll metabolic process1.52E-05
9GO:0009396: folic acid-containing compound biosynthetic process3.99E-05
10GO:0044030: regulation of DNA methylation5.52E-05
11GO:0035999: tetrahydrofolate interconversion7.20E-05
12GO:0006790: sulfur compound metabolic process9.99E-05
13GO:0000162: tryptophan biosynthetic process1.41E-04
14GO:0006730: one-carbon metabolic process1.86E-04
15GO:0009851: auxin biosynthetic process2.72E-04
16GO:0042128: nitrate assimilation3.92E-04
17GO:0010043: response to zinc ion4.78E-04
18GO:0009853: photorespiration5.07E-04
19GO:0009658: chloroplast organization1.72E-03
20GO:0055114: oxidation-reduction process1.01E-02
RankGO TermAdjusted P value
1GO:0008482: sulfite oxidase activity0.00E+00
2GO:0004123: cystathionine gamma-lyase activity1.21E-06
3GO:0033984: indole-3-glycerol-phosphate lyase activity1.21E-06
4GO:0004121: cystathionine beta-lyase activity1.21E-06
5GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity3.46E-06
6GO:0004477: methenyltetrahydrofolate cyclohydrolase activity3.46E-06
7GO:0004046: aminoacylase activity3.46E-06
8GO:0003962: cystathionine gamma-synthase activity6.60E-06
9GO:0004834: tryptophan synthase activity1.52E-05
10GO:0030151: molybdenum ion binding2.06E-05
11GO:0004559: alpha-mannosidase activity3.30E-05
12GO:0016491: oxidoreductase activity4.67E-04
13GO:0030170: pyridoxal phosphate binding1.12E-03
14GO:0030246: carbohydrate binding4.65E-03
15GO:0003824: catalytic activity6.57E-03
RankGO TermAdjusted P value
1GO:0009507: chloroplast7.90E-05
2GO:0009505: plant-type cell wall4.46E-04
3GO:0005773: vacuole1.77E-03
4GO:0005777: peroxisome4.17E-03
5GO:0005737: cytoplasm5.62E-03
6GO:0005774: vacuolar membrane1.47E-02
7GO:0009570: chloroplast stroma2.33E-02
8GO:0005783: endoplasmic reticulum2.43E-02
9GO:0005794: Golgi apparatus4.78E-02
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Gene type



Gene DE type