co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G61150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032497: detection of lipopolysaccharide	0.00E+00
2	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
3	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
4	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
5	GO:0080050: regulation of seed development	0.00E+00
6	GO:0009873: ethylene-activated signaling pathway	5.65E-05
7	GO:0006811: ion transport	5.87E-05
8	GO:0006631: fatty acid metabolic process	1.05E-04
9	GO:0042335: cuticle development	1.62E-04
10	GO:0030974: thiamine pyrophosphate transport	2.34E-04
11	GO:0009865: pollen tube adhesion	2.34E-04
12	GO:0090421: embryonic meristem initiation	2.34E-04
13	GO:1902265: abscisic acid homeostasis	2.34E-04
14	GO:0046938: phytochelatin biosynthetic process	2.34E-04
15	GO:0051180: vitamin transport	2.34E-04
16	GO:0009827: plant-type cell wall modification	2.59E-04
17	GO:0009624: response to nematode	3.65E-04
18	GO:0000038: very long-chain fatty acid metabolic process	5.04E-04
19	GO:0052544: defense response by callose deposition in cell wall	5.04E-04
20	GO:0015786: UDP-glucose transport	5.20E-04
21	GO:0008616: queuosine biosynthetic process	5.20E-04
22	GO:0031407: oxylipin metabolic process	5.20E-04
23	GO:0010289: homogalacturonan biosynthetic process	5.20E-04
24	GO:0007000: nucleolus organization	5.20E-04
25	GO:0007130: synaptonemal complex assembly	5.20E-04
26	GO:0006898: receptor-mediated endocytosis	5.20E-04
27	GO:0015893: drug transport	5.20E-04
28	GO:0006468: protein phosphorylation	6.89E-04
29	GO:0006355: regulation of transcription, DNA-templated	7.62E-04
30	GO:0070588: calcium ion transmembrane transport	8.23E-04
31	GO:0044210: 'de novo' CTP biosynthetic process	8.44E-04
32	GO:0016045: detection of bacterium	8.44E-04
33	GO:0010359: regulation of anion channel activity	8.44E-04
34	GO:0010288: response to lead ion	8.44E-04
35	GO:0045793: positive regulation of cell size	8.44E-04
36	GO:0090630: activation of GTPase activity	8.44E-04
37	GO:0015783: GDP-fucose transport	8.44E-04
38	GO:0051211: anisotropic cell growth	8.44E-04
39	GO:0042344: indole glucosinolate catabolic process	8.44E-04
40	GO:0000280: nuclear division	8.44E-04
41	GO:0010025: wax biosynthetic process	9.13E-04
42	GO:0007166: cell surface receptor signaling pathway	1.03E-03
43	GO:0010468: regulation of gene expression	1.10E-03
44	GO:0010371: regulation of gibberellin biosynthetic process	1.20E-03
45	GO:0072334: UDP-galactose transmembrane transport	1.20E-03
46	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.20E-03
47	GO:0015700: arsenite transport	1.20E-03
48	GO:0042991: transcription factor import into nucleus	1.61E-03
49	GO:1902347: response to strigolactone	1.61E-03
50	GO:0009687: abscisic acid metabolic process	1.61E-03
51	GO:0046345: abscisic acid catabolic process	1.61E-03
52	GO:0022622: root system development	1.61E-03
53	GO:0048868: pollen tube development	1.97E-03
54	GO:0045489: pectin biosynthetic process	1.97E-03
55	GO:0006873: cellular ion homeostasis	2.05E-03
56	GO:0006665: sphingolipid metabolic process	2.05E-03
57	GO:0009823: cytokinin catabolic process	2.05E-03
58	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.39E-03
59	GO:0010200: response to chitin	2.39E-03
60	GO:0047484: regulation of response to osmotic stress	2.52E-03
61	GO:0006751: glutathione catabolic process	2.52E-03
62	GO:0019760: glucosinolate metabolic process	2.94E-03
63	GO:0080113: regulation of seed growth	3.03E-03
64	GO:1901001: negative regulation of response to salt stress	3.03E-03
65	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.03E-03
66	GO:2000033: regulation of seed dormancy process	3.03E-03
67	GO:0006351: transcription, DNA-templated	3.34E-03
68	GO:0010103: stomatal complex morphogenesis	3.58E-03
69	GO:0032880: regulation of protein localization	3.58E-03
70	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.58E-03
71	GO:0030497: fatty acid elongation	3.58E-03
72	GO:0009690: cytokinin metabolic process	4.15E-03
73	GO:0007155: cell adhesion	4.15E-03
74	GO:0006633: fatty acid biosynthetic process	4.15E-03
75	GO:0009819: drought recovery	4.15E-03
76	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	4.15E-03
77	GO:0006952: defense response	4.61E-03
78	GO:0009880: embryonic pattern specification	4.74E-03
79	GO:0001708: cell fate specification	5.37E-03
80	GO:0098656: anion transmembrane transport	5.37E-03
81	GO:0046685: response to arsenic-containing substance	5.37E-03
82	GO:0007346: regulation of mitotic cell cycle	6.03E-03
83	GO:0048268: clathrin coat assembly	6.03E-03
84	GO:0042761: very long-chain fatty acid biosynthetic process	6.03E-03
85	GO:0009641: shade avoidance	6.71E-03
86	GO:0019538: protein metabolic process	6.71E-03
87	GO:0048765: root hair cell differentiation	7.43E-03
88	GO:0010105: negative regulation of ethylene-activated signaling pathway	8.17E-03
89	GO:0071555: cell wall organization	8.64E-03
90	GO:0050826: response to freezing	8.93E-03
91	GO:0018107: peptidyl-threonine phosphorylation	8.93E-03
92	GO:2000012: regulation of auxin polar transport	8.93E-03
93	GO:0042538: hyperosmotic salinity response	9.38E-03
94	GO:0048467: gynoecium development	9.72E-03
95	GO:0010030: positive regulation of seed germination	1.05E-02
96	GO:0009833: plant-type primary cell wall biogenesis	1.14E-02
97	GO:2000377: regulation of reactive oxygen species metabolic process	1.22E-02
98	GO:0009863: salicylic acid mediated signaling pathway	1.22E-02
99	GO:0010187: negative regulation of seed germination	1.22E-02
100	GO:0043622: cortical microtubule organization	1.31E-02
101	GO:0045454: cell redox homeostasis	1.35E-02
102	GO:0031408: oxylipin biosynthetic process	1.40E-02
103	GO:0051321: meiotic cell cycle	1.40E-02
104	GO:0042545: cell wall modification	1.40E-02
105	GO:0010017: red or far-red light signaling pathway	1.50E-02
106	GO:0001944: vasculature development	1.59E-02
107	GO:0010089: xylem development	1.69E-02
108	GO:0010584: pollen exine formation	1.69E-02
109	GO:0006817: phosphate ion transport	1.69E-02
110	GO:0010091: trichome branching	1.69E-02
111	GO:0008284: positive regulation of cell proliferation	1.79E-02
112	GO:0000271: polysaccharide biosynthetic process	1.89E-02
113	GO:0010268: brassinosteroid homeostasis	1.99E-02
114	GO:0009960: endosperm development	1.99E-02
115	GO:0009958: positive gravitropism	1.99E-02
116	GO:0048544: recognition of pollen	2.10E-02
117	GO:0016132: brassinosteroid biosynthetic process	2.31E-02
118	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.31E-02
119	GO:0045490: pectin catabolic process	2.49E-02
120	GO:0009639: response to red or far red light	2.65E-02
121	GO:0016125: sterol metabolic process	2.65E-02
122	GO:0009414: response to water deprivation	2.72E-02
123	GO:0009739: response to gibberellin	2.79E-02
124	GO:0006470: protein dephosphorylation	2.85E-02
125	GO:0000910: cytokinesis	2.89E-02
126	GO:0009911: positive regulation of flower development	3.01E-02
127	GO:0010029: regulation of seed germination	3.13E-02
128	GO:0009737: response to abscisic acid	3.14E-02
129	GO:0016049: cell growth	3.50E-02
130	GO:0009416: response to light stimulus	3.60E-02
131	GO:0030244: cellulose biosynthetic process	3.63E-02
132	GO:0048481: plant ovule development	3.63E-02
133	GO:0009834: plant-type secondary cell wall biogenesis	3.89E-02
134	GO:0016310: phosphorylation	3.96E-02
135	GO:0048527: lateral root development	4.03E-02
136	GO:0045087: innate immune response	4.30E-02
137	GO:0016051: carbohydrate biosynthetic process	4.30E-02
138	GO:0009637: response to blue light	4.30E-02
139	GO:0009867: jasmonic acid mediated signaling pathway	4.30E-02
140	GO:0009409: response to cold	4.36E-02
141	GO:0009723: response to ethylene	4.44E-02
142	GO:0006839: mitochondrial transport	4.71E-02
143	GO:0055085: transmembrane transport	4.82E-02
144	GO:0006897: endocytosis	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0017048: Rho GTPase binding	0.00E+00
2	GO:0009922: fatty acid elongase activity	5.04E-07
3	GO:0070330: aromatase activity	9.29E-06
4	GO:0003883: CTP synthase activity	2.11E-05
5	GO:0016301: kinase activity	3.04E-05
6	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	5.46E-05
7	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	5.46E-05
8	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	5.46E-05
9	GO:0018685: alkane 1-monooxygenase activity	6.16E-05
10	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.13E-04
11	GO:0043565: sequence-specific DNA binding	1.69E-04
12	GO:0071992: phytochelatin transmembrane transporter activity	2.34E-04
13	GO:0090422: thiamine pyrophosphate transporter activity	2.34E-04
14	GO:0046870: cadmium ion binding	2.34E-04
15	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	2.34E-04
16	GO:0016629: 12-oxophytodienoate reductase activity	5.20E-04
17	GO:0017022: myosin binding	5.20E-04
18	GO:0004103: choline kinase activity	5.20E-04
19	GO:0017040: ceramidase activity	5.20E-04
20	GO:0003839: gamma-glutamylcyclotransferase activity	5.20E-04
21	GO:0008479: queuine tRNA-ribosyltransferase activity	5.20E-04
22	GO:0044212: transcription regulatory region DNA binding	7.21E-04
23	GO:0005457: GDP-fucose transmembrane transporter activity	8.44E-04
24	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	8.44E-04
25	GO:0048487: beta-tubulin binding	1.20E-03
26	GO:0005460: UDP-glucose transmembrane transporter activity	1.20E-03
27	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.20E-03
28	GO:0004674: protein serine/threonine kinase activity	1.27E-03
29	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.05E-03
30	GO:0010294: abscisic acid glucosyltransferase activity	2.05E-03
31	GO:0005459: UDP-galactose transmembrane transporter activity	2.05E-03
32	GO:0019139: cytokinin dehydrogenase activity	2.05E-03
33	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.00E-03
34	GO:0051020: GTPase binding	3.03E-03
35	GO:0016209: antioxidant activity	4.15E-03
36	GO:0008308: voltage-gated anion channel activity	4.74E-03
37	GO:0000989: transcription factor activity, transcription factor binding	5.37E-03
38	GO:0005545: 1-phosphatidylinositol binding	6.71E-03
39	GO:0004713: protein tyrosine kinase activity	6.71E-03
40	GO:0005315: inorganic phosphate transmembrane transporter activity	8.93E-03
41	GO:0005262: calcium channel activity	8.93E-03
42	GO:0005388: calcium-transporting ATPase activity	8.93E-03
43	GO:0005524: ATP binding	8.98E-03
44	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.72E-03
45	GO:0008083: growth factor activity	9.72E-03
46	GO:0031625: ubiquitin protein ligase binding	1.12E-02
47	GO:0045330: aspartyl esterase activity	1.12E-02
48	GO:0052689: carboxylic ester hydrolase activity	1.22E-02
49	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.23E-02
50	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.31E-02
51	GO:0051087: chaperone binding	1.31E-02
52	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.31E-02
53	GO:0030599: pectinesterase activity	1.35E-02
54	GO:0004707: MAP kinase activity	1.40E-02
55	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.50E-02
56	GO:0030246: carbohydrate binding	1.53E-02
57	GO:0008514: organic anion transmembrane transporter activity	1.69E-02
58	GO:0003677: DNA binding	1.92E-02
59	GO:0030276: clathrin binding	1.99E-02
60	GO:0010181: FMN binding	2.10E-02
61	GO:0046910: pectinesterase inhibitor activity	2.32E-02
62	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.77E-02
63	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.77E-02
64	GO:0016413: O-acetyltransferase activity	2.89E-02
65	GO:0016597: amino acid binding	2.89E-02
66	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.50E-02
67	GO:0005096: GTPase activator activity	3.76E-02
68	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.89E-02
69	GO:0016788: hydrolase activity, acting on ester bonds	3.92E-02
70	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.03E-02
71	GO:0004672: protein kinase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0070382: exocytic vesicle	2.34E-04
2	GO:0030133: transport vesicle	5.20E-04
3	GO:0045177: apical part of cell	1.20E-03
4	GO:0000793: condensed chromosome	2.52E-03
5	GO:0000794: condensed nuclear chromosome	3.58E-03
6	GO:0016604: nuclear body	6.03E-03
7	GO:0046658: anchored component of plasma membrane	6.68E-03
8	GO:0005768: endosome	7.20E-03
9	GO:0016021: integral component of membrane	7.95E-03
10	GO:0005938: cell cortex	8.93E-03
11	GO:0005886: plasma membrane	1.04E-02
12	GO:0010008: endosome membrane	1.23E-02
13	GO:0005905: clathrin-coated pit	1.40E-02
14	GO:0030136: clathrin-coated vesicle	1.79E-02
15	GO:0005802: trans-Golgi network	1.99E-02
16	GO:0043231: intracellular membrane-bounded organelle	1.99E-02
17	GO:0005622: intracellular	2.32E-02
18	GO:0005615: extracellular space	2.79E-02
19	GO:0000139: Golgi membrane	4.36E-02
20	GO:0031902: late endosome membrane	4.85E-02