Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G60910

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009661: chromoplast organization0.00E+00
2GO:0090470: shoot organ boundary specification0.00E+00
3GO:0071806: protein transmembrane transport1.48E-05
4GO:1904143: positive regulation of carotenoid biosynthetic process3.88E-05
5GO:0080185: effector dependent induction by symbiont of host immune response3.88E-05
6GO:0034755: iron ion transmembrane transport3.88E-05
7GO:0009150: purine ribonucleotide metabolic process6.95E-05
8GO:0010371: regulation of gibberellin biosynthetic process1.05E-04
9GO:0016120: carotene biosynthetic process1.88E-04
10GO:0010038: response to metal ion3.32E-04
11GO:0006605: protein targeting3.84E-04
12GO:0050821: protein stabilization3.84E-04
13GO:0048564: photosystem I assembly3.84E-04
14GO:0090305: nucleic acid phosphodiester bond hydrolysis4.93E-04
15GO:1900426: positive regulation of defense response to bacterium5.49E-04
16GO:0006879: cellular iron ion homeostasis6.67E-04
17GO:0008285: negative regulation of cell proliferation6.67E-04
18GO:0006790: sulfur compound metabolic process7.29E-04
19GO:0009767: photosynthetic electron transport chain7.91E-04
20GO:0090351: seedling development9.19E-04
21GO:0009658: chloroplast organization1.05E-03
22GO:0010073: meristem maintenance1.12E-03
23GO:0016226: iron-sulfur cluster assembly1.26E-03
24GO:0010227: floral organ abscission1.34E-03
25GO:0030163: protein catabolic process2.07E-03
26GO:0018298: protein-chromophore linkage2.90E-03
27GO:0006811: ion transport3.09E-03
28GO:0009640: photomorphogenesis4.04E-03
29GO:0009644: response to high light intensity4.26E-03
30GO:0009636: response to toxic substance4.37E-03
31GO:0007623: circadian rhythm9.23E-03
32GO:0010228: vegetative to reproductive phase transition of meristem9.53E-03
33GO:0009739: response to gibberellin9.99E-03
34GO:0046686: response to cadmium ion1.04E-02
35GO:0009723: response to ethylene1.39E-02
36GO:0010200: response to chitin1.50E-02
37GO:0015979: photosynthesis1.60E-02
38GO:0009751: response to salicylic acid1.91E-02
39GO:0009753: response to jasmonic acid2.02E-02
40GO:0006357: regulation of transcription from RNA polymerase II promoter2.35E-02
41GO:0055085: transmembrane transport3.44E-02
42GO:0006511: ubiquitin-dependent protein catabolic process3.61E-02
RankGO TermAdjusted P value
1GO:0032947: protein complex scaffold6.95E-05
2GO:0047627: adenylylsulfatase activity1.05E-04
3GO:0000293: ferric-chelate reductase activity2.34E-04
4GO:0005381: iron ion transmembrane transporter activity5.49E-04
5GO:0031072: heat shock protein binding7.91E-04
6GO:0051536: iron-sulfur cluster binding1.05E-03
7GO:0022891: substrate-specific transmembrane transporter activity1.34E-03
8GO:0008080: N-acetyltransferase activity1.65E-03
9GO:0004518: nuclease activity1.98E-03
10GO:0016168: chlorophyll binding2.52E-03
11GO:0004364: glutathione transferase activity3.93E-03
12GO:0005198: structural molecule activity4.37E-03
13GO:0031625: ubiquitin protein ligase binding5.31E-03
14GO:0051082: unfolded protein binding6.31E-03
15GO:0016746: transferase activity, transferring acyl groups6.44E-03
16GO:0016491: oxidoreductase activity8.77E-03
17GO:0008017: microtubule binding9.53E-03
18GO:0008233: peptidase activity1.44E-02
19GO:0061630: ubiquitin protein ligase activity1.51E-02
20GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.66E-02
21GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.79E-02
22GO:0003676: nucleic acid binding2.76E-02
23GO:0043565: sequence-specific DNA binding3.42E-02
24GO:0005507: copper ion binding3.73E-02
25GO:0005506: iron ion binding4.74E-02
26GO:0044212: transcription regulatory region DNA binding4.79E-02
RankGO TermAdjusted P value
1GO:0031972: chloroplast intermembrane space1.48E-05
2GO:0009528: plastid inner membrane6.95E-05
3GO:0031969: chloroplast membrane9.65E-05
4GO:0009523: photosystem II1.81E-03
5GO:0009507: chloroplast3.42E-03
6GO:0005777: peroxisome3.20E-02
7GO:0009570: chloroplast stroma4.38E-02
8GO:0005829: cytosol4.95E-02
9GO:0005840: ribosome4.96E-02
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Gene type



Gene DE type