GO Enrichment Analysis of Co-expressed Genes with
AT3G60290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 2 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 3 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 4 | GO:0010028: xanthophyll cycle | 5.18E-05 |
| 5 | GO:0031648: protein destabilization | 1.27E-04 |
| 6 | GO:0016122: xanthophyll metabolic process | 1.27E-04 |
| 7 | GO:0051262: protein tetramerization | 1.27E-04 |
| 8 | GO:0010623: programmed cell death involved in cell development | 2.17E-04 |
| 9 | GO:1901000: regulation of response to salt stress | 3.17E-04 |
| 10 | GO:0030100: regulation of endocytosis | 3.17E-04 |
| 11 | GO:0010021: amylopectin biosynthetic process | 4.24E-04 |
| 12 | GO:0006808: regulation of nitrogen utilization | 4.24E-04 |
| 13 | GO:0015689: molybdate ion transport | 4.24E-04 |
| 14 | GO:0015994: chlorophyll metabolic process | 4.24E-04 |
| 15 | GO:0010508: positive regulation of autophagy | 4.24E-04 |
| 16 | GO:0006461: protein complex assembly | 5.39E-04 |
| 17 | GO:0006656: phosphatidylcholine biosynthetic process | 5.39E-04 |
| 18 | GO:0000470: maturation of LSU-rRNA | 6.60E-04 |
| 19 | GO:0071470: cellular response to osmotic stress | 7.87E-04 |
| 20 | GO:0005978: glycogen biosynthetic process | 1.06E-03 |
| 21 | GO:0032544: plastid translation | 1.20E-03 |
| 22 | GO:0051865: protein autoubiquitination | 1.35E-03 |
| 23 | GO:0005982: starch metabolic process | 1.50E-03 |
| 24 | GO:0006415: translational termination | 1.84E-03 |
| 25 | GO:0009409: response to cold | 1.95E-03 |
| 26 | GO:0006094: gluconeogenesis | 2.19E-03 |
| 27 | GO:0010102: lateral root morphogenesis | 2.19E-03 |
| 28 | GO:0009691: cytokinin biosynthetic process | 2.19E-03 |
| 29 | GO:0006289: nucleotide-excision repair | 2.96E-03 |
| 30 | GO:0061077: chaperone-mediated protein folding | 3.37E-03 |
| 31 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 3.59E-03 |
| 32 | GO:0071456: cellular response to hypoxia | 3.59E-03 |
| 33 | GO:0009686: gibberellin biosynthetic process | 3.80E-03 |
| 34 | GO:0010089: xylem development | 4.03E-03 |
| 35 | GO:0006284: base-excision repair | 4.03E-03 |
| 36 | GO:0019252: starch biosynthetic process | 5.21E-03 |
| 37 | GO:1901657: glycosyl compound metabolic process | 5.97E-03 |
| 38 | GO:0016567: protein ubiquitination | 6.65E-03 |
| 39 | GO:0010027: thylakoid membrane organization | 7.04E-03 |
| 40 | GO:0016126: sterol biosynthetic process | 7.04E-03 |
| 41 | GO:0009631: cold acclimation | 9.36E-03 |
| 42 | GO:0016051: carbohydrate biosynthetic process | 9.99E-03 |
| 43 | GO:0006631: fatty acid metabolic process | 1.13E-02 |
| 44 | GO:0055114: oxidation-reduction process | 1.25E-02 |
| 45 | GO:0006096: glycolytic process | 1.66E-02 |
| 46 | GO:0043086: negative regulation of catalytic activity | 1.66E-02 |
| 47 | GO:0009740: gibberellic acid mediated signaling pathway | 1.81E-02 |
| 48 | GO:0009742: brassinosteroid mediated signaling pathway | 1.97E-02 |
| 49 | GO:0009058: biosynthetic process | 2.31E-02 |
| 50 | GO:0040008: regulation of growth | 2.70E-02 |
| 51 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.03E-02 |
| 52 | GO:0009414: response to water deprivation | 3.16E-02 |
| 53 | GO:0006979: response to oxidative stress | 3.26E-02 |
| 54 | GO:0009658: chloroplast organization | 3.81E-02 |
| 55 | GO:0006970: response to osmotic stress | 4.02E-02 |
| 56 | GO:0015979: photosynthesis | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity | 0.00E+00 |
| 2 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 3 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 4 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 5 | GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity | 5.18E-05 |
| 6 | GO:0005227: calcium activated cation channel activity | 5.18E-05 |
| 7 | GO:0004105: choline-phosphate cytidylyltransferase activity | 5.18E-05 |
| 8 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.27E-04 |
| 9 | GO:0047216: inositol 3-alpha-galactosyltransferase activity | 1.27E-04 |
| 10 | GO:0043169: cation binding | 2.17E-04 |
| 11 | GO:0017150: tRNA dihydrouridine synthase activity | 2.17E-04 |
| 12 | GO:0016149: translation release factor activity, codon specific | 3.17E-04 |
| 13 | GO:0019104: DNA N-glycosylase activity | 4.24E-04 |
| 14 | GO:0004506: squalene monooxygenase activity | 4.24E-04 |
| 15 | GO:0015098: molybdate ion transmembrane transporter activity | 4.24E-04 |
| 16 | GO:0004332: fructose-bisphosphate aldolase activity | 6.60E-04 |
| 17 | GO:0005261: cation channel activity | 7.87E-04 |
| 18 | GO:0016831: carboxy-lyase activity | 9.18E-04 |
| 19 | GO:0004033: aldo-keto reductase (NADP) activity | 1.06E-03 |
| 20 | GO:0003747: translation release factor activity | 1.35E-03 |
| 21 | GO:0044183: protein binding involved in protein folding | 1.84E-03 |
| 22 | GO:0047372: acylglycerol lipase activity | 1.84E-03 |
| 23 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.19E-03 |
| 24 | GO:0050660: flavin adenine dinucleotide binding | 5.67E-03 |
| 25 | GO:0003684: damaged DNA binding | 6.23E-03 |
| 26 | GO:0102483: scopolin beta-glucosidase activity | 7.88E-03 |
| 27 | GO:0016491: oxidoreductase activity | 9.20E-03 |
| 28 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 9.99E-03 |
| 29 | GO:0008422: beta-glucosidase activity | 1.06E-02 |
| 30 | GO:0043621: protein self-association | 1.26E-02 |
| 31 | GO:0016787: hydrolase activity | 1.71E-02 |
| 32 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.11E-02 |
| 33 | GO:0016758: transferase activity, transferring hexosyl groups | 2.18E-02 |
| 34 | GO:0019843: rRNA binding | 2.22E-02 |
| 35 | GO:0046910: pectinesterase inhibitor activity | 2.66E-02 |
| 36 | GO:0000287: magnesium ion binding | 3.76E-02 |
| 37 | GO:0061630: ubiquitin protein ligase activity | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.49E-05 |
| 2 | GO:0030095: chloroplast photosystem II | 9.00E-05 |
| 3 | GO:0009534: chloroplast thylakoid | 5.69E-04 |
| 4 | GO:0005798: Golgi-associated vesicle | 6.60E-04 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 9.29E-04 |
| 6 | GO:0009501: amyloplast | 1.06E-03 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 2.32E-03 |
| 8 | GO:0005769: early endosome | 2.76E-03 |
| 9 | GO:0009654: photosystem II oxygen evolving complex | 3.16E-03 |
| 10 | GO:0019898: extrinsic component of membrane | 5.21E-03 |
| 11 | GO:0031977: thylakoid lumen | 1.13E-02 |
| 12 | GO:0031966: mitochondrial membrane | 1.40E-02 |
| 13 | GO:0009570: chloroplast stroma | 2.11E-02 |
| 14 | GO:0010287: plastoglobule | 2.14E-02 |
| 15 | GO:0009536: plastid | 3.96E-02 |
| 16 | GO:0009941: chloroplast envelope | 4.53E-02 |
| 17 | GO:0022625: cytosolic large ribosomal subunit | 4.60E-02 |