co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G59700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0061416: regulation of transcription from RNA polymerase II promoter in response to salt stress	0.00E+00
2	GO:0032499: detection of peptidoglycan	0.00E+00
3	GO:2001143: N-methylnicotinate transport	0.00E+00
4	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
5	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
6	GO:2001142: nicotinate transport	0.00E+00
7	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
8	GO:0010200: response to chitin	6.37E-13
9	GO:0006468: protein phosphorylation	1.22E-09
10	GO:0002679: respiratory burst involved in defense response	3.69E-08
11	GO:0051865: protein autoubiquitination	4.41E-06
12	GO:0006979: response to oxidative stress	5.81E-05
13	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	8.05E-05
14	GO:0045010: actin nucleation	1.37E-04
15	GO:0002229: defense response to oomycetes	1.40E-04
16	GO:0009699: phenylpropanoid biosynthetic process	1.72E-04
17	GO:0007229: integrin-mediated signaling pathway	1.77E-04
18	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.77E-04
19	GO:0032491: detection of molecule of fungal origin	1.77E-04
20	GO:1900384: regulation of flavonol biosynthetic process	1.77E-04
21	GO:0006083: acetate metabolic process	1.77E-04
22	GO:0010726: positive regulation of hydrogen peroxide metabolic process	1.77E-04
23	GO:0007064: mitotic sister chromatid cohesion	2.95E-04
24	GO:0016567: protein ubiquitination	3.40E-04
25	GO:0046939: nucleotide phosphorylation	4.01E-04
26	GO:0015824: proline transport	4.01E-04
27	GO:0042754: negative regulation of circadian rhythm	4.01E-04
28	GO:0055046: microgametogenesis	4.47E-04
29	GO:0010447: response to acidic pH	6.55E-04
30	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	6.55E-04
31	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	6.55E-04
32	GO:0009695: jasmonic acid biosynthetic process	7.64E-04
33	GO:0009809: lignin biosynthetic process	9.17E-04
34	GO:0033014: tetrapyrrole biosynthetic process	9.34E-04
35	GO:0071323: cellular response to chitin	9.34E-04
36	GO:0043207: response to external biotic stimulus	9.34E-04
37	GO:0030100: regulation of endocytosis	9.34E-04
38	GO:0042742: defense response to bacterium	1.15E-03
39	GO:0034440: lipid oxidation	1.24E-03
40	GO:0071219: cellular response to molecule of bacterial origin	1.24E-03
41	GO:0015743: malate transport	1.24E-03
42	GO:0045227: capsule polysaccharide biosynthetic process	1.24E-03
43	GO:0009652: thigmotropism	1.24E-03
44	GO:0033358: UDP-L-arabinose biosynthetic process	1.24E-03
45	GO:0009620: response to fungus	1.27E-03
46	GO:0046777: protein autophosphorylation	1.38E-03
47	GO:0048544: recognition of pollen	1.44E-03
48	GO:0045487: gibberellin catabolic process	1.57E-03
49	GO:0030041: actin filament polymerization	1.57E-03
50	GO:0010193: response to ozone	1.65E-03
51	GO:0010337: regulation of salicylic acid metabolic process	1.94E-03
52	GO:0010942: positive regulation of cell death	1.94E-03
53	GO:0015691: cadmium ion transport	1.94E-03
54	GO:0006751: glutathione catabolic process	1.94E-03
55	GO:0048317: seed morphogenesis	1.94E-03
56	GO:0006828: manganese ion transport	1.94E-03
57	GO:0010555: response to mannitol	2.32E-03
58	GO:0080086: stamen filament development	2.32E-03
59	GO:2000067: regulation of root morphogenesis	2.32E-03
60	GO:0009753: response to jasmonic acid	2.50E-03
61	GO:0009816: defense response to bacterium, incompatible interaction	2.51E-03
62	GO:1900057: positive regulation of leaf senescence	2.74E-03
63	GO:0010044: response to aluminum ion	2.74E-03
64	GO:0006955: immune response	2.74E-03
65	GO:0008219: cell death	3.09E-03
66	GO:1900150: regulation of defense response to fungus	3.17E-03
67	GO:0007166: cell surface receptor signaling pathway	3.36E-03
68	GO:0009617: response to bacterium	3.55E-03
69	GO:0009932: cell tip growth	3.63E-03
70	GO:0007186: G-protein coupled receptor signaling pathway	3.63E-03
71	GO:0006865: amino acid transport	3.74E-03
72	GO:0045087: innate immune response	3.91E-03
73	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.10E-03
74	GO:0006783: heme biosynthetic process	4.10E-03
75	GO:0009835: fruit ripening	4.10E-03
76	GO:2000280: regulation of root development	4.60E-03
77	GO:0006952: defense response	4.60E-03
78	GO:0008202: steroid metabolic process	4.60E-03
79	GO:0006779: porphyrin-containing compound biosynthetic process	4.60E-03
80	GO:0009086: methionine biosynthetic process	4.60E-03
81	GO:0006782: protoporphyrinogen IX biosynthetic process	5.11E-03
82	GO:0009737: response to abscisic acid	5.12E-03
83	GO:0009611: response to wounding	5.55E-03
84	GO:1903507: negative regulation of nucleic acid-templated transcription	5.65E-03
85	GO:0009750: response to fructose	5.65E-03
86	GO:0006816: calcium ion transport	5.65E-03
87	GO:0016310: phosphorylation	6.75E-03
88	GO:0006006: glucose metabolic process	6.78E-03
89	GO:0019853: L-ascorbic acid biosynthetic process	7.98E-03
90	GO:0046854: phosphatidylinositol phosphorylation	7.98E-03
91	GO:0009225: nucleotide-sugar metabolic process	7.98E-03
92	GO:0009901: anther dehiscence	7.98E-03
93	GO:0009863: salicylic acid mediated signaling pathway	9.26E-03
94	GO:0031408: oxylipin biosynthetic process	1.06E-02
95	GO:0016998: cell wall macromolecule catabolic process	1.06E-02
96	GO:0098542: defense response to other organism	1.06E-02
97	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.13E-02
98	GO:0071456: cellular response to hypoxia	1.13E-02
99	GO:0040007: growth	1.20E-02
100	GO:0006012: galactose metabolic process	1.20E-02
101	GO:0009693: ethylene biosynthetic process	1.20E-02
102	GO:0071215: cellular response to abscisic acid stimulus	1.20E-02
103	GO:0009686: gibberellin biosynthetic process	1.20E-02
104	GO:0009651: response to salt stress	1.24E-02
105	GO:0006817: phosphate ion transport	1.27E-02
106	GO:0009845: seed germination	1.31E-02
107	GO:0048653: anther development	1.43E-02
108	GO:0042631: cellular response to water deprivation	1.43E-02
109	GO:0009960: endosperm development	1.50E-02
110	GO:0009414: response to water deprivation	1.51E-02
111	GO:0009749: response to glucose	1.66E-02
112	GO:0009630: gravitropism	1.83E-02
113	GO:0006470: protein dephosphorylation	1.92E-02
114	GO:0009639: response to red or far red light	2.00E-02
115	GO:0010468: regulation of gene expression	2.00E-02
116	GO:0009738: abscisic acid-activated signaling pathway	2.11E-02
117	GO:0009555: pollen development	2.20E-02
118	GO:0035556: intracellular signal transduction	2.36E-02
119	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.36E-02
120	GO:0048573: photoperiodism, flowering	2.55E-02
121	GO:0015995: chlorophyll biosynthetic process	2.55E-02
122	GO:0016049: cell growth	2.64E-02
123	GO:0009817: defense response to fungus, incompatible interaction	2.74E-02
124	GO:0009723: response to ethylene	3.00E-02
125	GO:0009867: jasmonic acid mediated signaling pathway	3.24E-02
126	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.33E-02
127	GO:0030001: metal ion transport	3.56E-02
128	GO:0006897: endocytosis	3.67E-02
129	GO:0006631: fatty acid metabolic process	3.67E-02
130	GO:0009744: response to sucrose	3.88E-02
131	GO:0031347: regulation of defense response	4.45E-02
132	GO:0016042: lipid catabolic process	4.60E-02
133	GO:0010224: response to UV-B	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
2	GO:2001080: chitosan binding	0.00E+00
3	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
4	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
5	GO:0090416: nicotinate transporter activity	0.00E+00
6	GO:0005522: profilin binding	0.00E+00
7	GO:0016301: kinase activity	1.60E-08
8	GO:0005524: ATP binding	2.39E-06
9	GO:0004672: protein kinase activity	5.13E-06
10	GO:0004674: protein serine/threonine kinase activity	5.52E-06
11	GO:0016621: cinnamoyl-CoA reductase activity	1.07E-04
12	GO:0004842: ubiquitin-protein transferase activity	1.48E-04
13	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	1.77E-04
14	GO:0080047: GDP-L-galactose phosphorylase activity	1.77E-04
15	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.77E-04
16	GO:0031219: levanase activity	1.77E-04
17	GO:0080048: GDP-D-glucose phosphorylase activity	1.77E-04
18	GO:0003987: acetate-CoA ligase activity	1.77E-04
19	GO:0051669: fructan beta-fructosidase activity	1.77E-04
20	GO:1990585: hydroxyproline O-arabinosyltransferase activity	4.01E-04
21	GO:0004103: choline kinase activity	4.01E-04
22	GO:0008883: glutamyl-tRNA reductase activity	4.01E-04
23	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	4.01E-04
24	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.07E-04
25	GO:0030246: carbohydrate binding	5.13E-04
26	GO:0031683: G-protein beta/gamma-subunit complex binding	6.55E-04
27	GO:0003840: gamma-glutamyltransferase activity	6.55E-04
28	GO:0036374: glutathione hydrolase activity	6.55E-04
29	GO:0015193: L-proline transmembrane transporter activity	6.55E-04
30	GO:0046423: allene-oxide cyclase activity	6.55E-04
31	GO:0016165: linoleate 13S-lipoxygenase activity	6.55E-04
32	GO:0001664: G-protein coupled receptor binding	6.55E-04
33	GO:0019201: nucleotide kinase activity	9.34E-04
34	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	9.34E-04
35	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	9.34E-04
36	GO:0005253: anion channel activity	1.24E-03
37	GO:0015368: calcium:cation antiporter activity	1.24E-03
38	GO:0050373: UDP-arabinose 4-epimerase activity	1.24E-03
39	GO:0015369: calcium:proton antiporter activity	1.24E-03
40	GO:0019199: transmembrane receptor protein kinase activity	1.24E-03
41	GO:0050662: coenzyme binding	1.44E-03
42	GO:0047631: ADP-ribose diphosphatase activity	1.57E-03
43	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.57E-03
44	GO:0016208: AMP binding	1.94E-03
45	GO:0080046: quercetin 4'-O-glucosyltransferase activity	1.94E-03
46	GO:0003978: UDP-glucose 4-epimerase activity	2.32E-03
47	GO:0004017: adenylate kinase activity	2.32E-03
48	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.60E-03
49	GO:0005085: guanyl-nucleotide exchange factor activity	2.74E-03
50	GO:0015140: malate transmembrane transporter activity	2.74E-03
51	GO:0052747: sinapyl alcohol dehydrogenase activity	3.17E-03
52	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.17E-03
53	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	3.17E-03
54	GO:0004430: 1-phosphatidylinositol 4-kinase activity	3.63E-03
55	GO:0008142: oxysterol binding	3.63E-03
56	GO:0004630: phospholipase D activity	3.63E-03
57	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.63E-03
58	GO:0016207: 4-coumarate-CoA ligase activity	4.10E-03
59	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.27E-03
60	GO:0047617: acyl-CoA hydrolase activity	4.60E-03
61	GO:0050660: flavin adenine dinucleotide binding	5.94E-03
62	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.20E-03
63	GO:0015171: amino acid transmembrane transporter activity	7.51E-03
64	GO:0008061: chitin binding	7.98E-03
65	GO:0004722: protein serine/threonine phosphatase activity	9.17E-03
66	GO:0003714: transcription corepressor activity	9.26E-03
67	GO:0003779: actin binding	9.37E-03
68	GO:0043565: sequence-specific DNA binding	1.04E-02
69	GO:0033612: receptor serine/threonine kinase binding	1.06E-02
70	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.06E-02
71	GO:0008408: 3'-5' exonuclease activity	1.06E-02
72	GO:0009055: electron carrier activity	1.16E-02
73	GO:0022891: substrate-specific transmembrane transporter activity	1.20E-02
74	GO:0016853: isomerase activity	1.58E-02
75	GO:0051015: actin filament binding	1.91E-02
76	GO:0008375: acetylglucosaminyltransferase activity	2.45E-02
77	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.45E-02
78	GO:0030247: polysaccharide binding	2.55E-02
79	GO:0004683: calmodulin-dependent protein kinase activity	2.55E-02
80	GO:0003682: chromatin binding	2.75E-02
81	GO:0050661: NADP binding	3.56E-02
82	GO:0005516: calmodulin binding	3.66E-02
83	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.85E-02
84	GO:0004871: signal transducer activity	4.03E-02
85	GO:0035091: phosphatidylinositol binding	4.11E-02
86	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.28E-02
87	GO:0003924: GTPase activity	4.73E-02
88	GO:0016298: lipase activity	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.34E-06
2	GO:0005911: cell-cell junction	1.77E-04
3	GO:0090404: pollen tube tip	3.42E-04
4	GO:0016021: integral component of membrane	1.53E-03
5	GO:0009514: glyoxysome	3.63E-03
6	GO:0043234: protein complex	8.61E-03
7	GO:0030136: clathrin-coated vesicle	1.35E-02
8	GO:0009705: plant-type vacuole membrane	1.68E-02
9	GO:0005737: cytoplasm	1.98E-02
10	GO:0032580: Golgi cisterna membrane	2.00E-02
11	GO:0009505: plant-type cell wall	2.19E-02
12	GO:0090406: pollen tube	3.88E-02
13	GO:0031966: mitochondrial membrane	4.56E-02
14	GO:0005768: endosome	4.63E-02