Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G59350

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045595: regulation of cell differentiation0.00E+00
2GO:0009737: response to abscisic acid2.35E-09
3GO:0009415: response to water1.69E-07
4GO:0009414: response to water deprivation2.97E-07
5GO:0006970: response to osmotic stress6.51E-06
6GO:0010286: heat acclimation2.41E-05
7GO:0009631: cold acclimation5.58E-05
8GO:0051180: vitamin transport6.26E-05
9GO:0030974: thiamine pyrophosphate transport6.26E-05
10GO:0050691: regulation of defense response to virus by host6.26E-05
11GO:0009611: response to wounding8.94E-05
12GO:0009409: response to cold1.04E-04
13GO:0009644: response to high light intensity1.06E-04
14GO:0010200: response to chitin1.40E-04
15GO:0015893: drug transport1.52E-04
16GO:0006741: NADP biosynthetic process1.52E-04
17GO:0009695: jasmonic acid biosynthetic process1.88E-04
18GO:0009269: response to desiccation2.08E-04
19GO:0010366: negative regulation of ethylene biosynthetic process2.57E-04
20GO:0019674: NAD metabolic process2.57E-04
21GO:0006473: protein acetylation2.57E-04
22GO:0006598: polyamine catabolic process2.57E-04
23GO:0080168: abscisic acid transport2.57E-04
24GO:0010031: circumnutation3.73E-04
25GO:0019363: pyridine nucleotide biosynthetic process3.73E-04
26GO:0033014: tetrapyrrole biosynthetic process3.73E-04
27GO:0034440: lipid oxidation4.99E-04
28GO:0010107: potassium ion import4.99E-04
29GO:0009738: abscisic acid-activated signaling pathway5.94E-04
30GO:0009164: nucleoside catabolic process6.32E-04
31GO:0045487: gibberellin catabolic process6.32E-04
32GO:0009651: response to salt stress7.34E-04
33GO:0006777: Mo-molybdopterin cofactor biosynthetic process7.73E-04
34GO:0006811: ion transport8.67E-04
35GO:0080086: stamen filament development9.20E-04
36GO:0006955: immune response1.07E-03
37GO:2000070: regulation of response to water deprivation1.24E-03
38GO:0048193: Golgi vesicle transport1.41E-03
39GO:0006783: heme biosynthetic process1.58E-03
40GO:0051865: protein autoubiquitination1.58E-03
41GO:0016573: histone acetylation1.77E-03
42GO:0006779: porphyrin-containing compound biosynthetic process1.77E-03
43GO:0010629: negative regulation of gene expression1.96E-03
44GO:0006782: protoporphyrinogen IX biosynthetic process1.96E-03
45GO:0009620: response to fungus2.17E-03
46GO:0010015: root morphogenesis2.17E-03
47GO:0072593: reactive oxygen species metabolic process2.17E-03
48GO:0050832: defense response to fungus2.36E-03
49GO:0002237: response to molecule of bacterial origin2.80E-03
50GO:0009901: anther dehiscence3.03E-03
51GO:0043622: cortical microtubule organization3.74E-03
52GO:0031408: oxylipin biosynthetic process3.98E-03
53GO:0007623: circadian rhythm4.06E-03
54GO:0010017: red or far-red light signaling pathway4.24E-03
55GO:0016226: iron-sulfur cluster assembly4.24E-03
56GO:0040007: growth4.50E-03
57GO:0009686: gibberellin biosynthetic process4.50E-03
58GO:0006470: protein dephosphorylation4.64E-03
59GO:0019722: calcium-mediated signaling4.76E-03
60GO:0010118: stomatal movement5.31E-03
61GO:0048653: anther development5.31E-03
62GO:0071472: cellular response to salt stress5.59E-03
63GO:0006351: transcription, DNA-templated5.78E-03
64GO:0006814: sodium ion transport5.88E-03
65GO:0009749: response to glucose6.17E-03
66GO:0006952: defense response7.03E-03
67GO:0019760: glucosinolate metabolic process7.38E-03
68GO:0009639: response to red or far red light7.38E-03
69GO:0006355: regulation of transcription, DNA-templated7.52E-03
70GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.04E-03
71GO:0001666: response to hypoxia8.35E-03
72GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.68E-03
73GO:0010029: regulation of seed germination8.68E-03
74GO:0006950: response to stress9.36E-03
75GO:0015995: chlorophyll biosynthetic process9.36E-03
76GO:0000160: phosphorelay signal transduction system1.04E-02
77GO:0010311: lateral root formation1.04E-02
78GO:0006629: lipid metabolic process1.15E-02
79GO:0045087: innate immune response1.19E-02
80GO:0009753: response to jasmonic acid1.23E-02
81GO:0006839: mitochondrial transport1.30E-02
82GO:0042542: response to hydrogen peroxide1.38E-02
83GO:0051707: response to other organism1.42E-02
84GO:0042546: cell wall biogenesis1.46E-02
85GO:0000209: protein polyubiquitination1.46E-02
86GO:0009873: ethylene-activated signaling pathway1.49E-02
87GO:0008643: carbohydrate transport1.50E-02
88GO:0006855: drug transmembrane transport1.58E-02
89GO:0031347: regulation of defense response1.63E-02
90GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.63E-02
91GO:0006812: cation transport1.67E-02
92GO:0006813: potassium ion transport1.75E-02
93GO:0009736: cytokinin-activated signaling pathway1.75E-02
94GO:0010224: response to UV-B1.80E-02
95GO:0009908: flower development1.85E-02
96GO:0045893: positive regulation of transcription, DNA-templated2.35E-02
97GO:0009742: brassinosteroid mediated signaling pathway2.35E-02
98GO:0000398: mRNA splicing, via spliceosome2.50E-02
99GO:0009790: embryo development2.95E-02
100GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.60E-02
101GO:0010468: regulation of gene expression3.77E-02
102GO:0006468: protein phosphorylation3.88E-02
103GO:0006979: response to oxidative stress4.16E-02
104GO:0009860: pollen tube growth4.78E-02
RankGO TermAdjusted P value
1GO:0061798: GTP 3',8'-cyclase activity0.00E+00
2GO:0042736: NADH kinase activity6.26E-05
3GO:0052894: norspermine:oxygen oxidoreductase activity6.26E-05
4GO:0090422: thiamine pyrophosphate transporter activity6.26E-05
5GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity6.26E-05
6GO:0090440: abscisic acid transporter activity6.26E-05
7GO:0008883: glutamyl-tRNA reductase activity1.52E-04
8GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity1.52E-04
9GO:0004383: guanylate cyclase activity2.57E-04
10GO:0016165: linoleate 13S-lipoxygenase activity2.57E-04
11GO:0046592: polyamine oxidase activity2.57E-04
12GO:0046423: allene-oxide cyclase activity2.57E-04
13GO:0044212: transcription regulatory region DNA binding3.47E-04
14GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity3.73E-04
15GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity3.73E-04
16GO:0001653: peptide receptor activity3.73E-04
17GO:0005432: calcium:sodium antiporter activity3.73E-04
18GO:0015297: antiporter activity4.56E-04
19GO:0004659: prenyltransferase activity4.99E-04
20GO:0047631: ADP-ribose diphosphatase activity6.32E-04
21GO:0000210: NAD+ diphosphatase activity7.73E-04
22GO:0019900: kinase binding9.20E-04
23GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides9.20E-04
24GO:0003950: NAD+ ADP-ribosyltransferase activity9.20E-04
25GO:0008143: poly(A) binding1.07E-03
26GO:0015491: cation:cation antiporter activity1.24E-03
27GO:0003951: NAD+ kinase activity1.41E-03
28GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors1.58E-03
29GO:0043565: sequence-specific DNA binding1.68E-03
30GO:0019888: protein phosphatase regulator activity2.58E-03
31GO:0008131: primary amine oxidase activity2.80E-03
32GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.80E-03
33GO:0003712: transcription cofactor activity3.03E-03
34GO:0004402: histone acetyltransferase activity5.31E-03
35GO:0003700: transcription factor activity, sequence-specific DNA binding5.39E-03
36GO:0000156: phosphorelay response regulator activity7.07E-03
37GO:0004806: triglyceride lipase activity9.36E-03
38GO:0004721: phosphoprotein phosphatase activity9.36E-03
39GO:0004722: protein serine/threonine phosphatase activity1.02E-02
40GO:0015238: drug transmembrane transporter activity1.04E-02
41GO:0046872: metal ion binding1.25E-02
42GO:0004712: protein serine/threonine/tyrosine kinase activity1.26E-02
43GO:0050661: NADP binding1.30E-02
44GO:0051539: 4 iron, 4 sulfur cluster binding1.30E-02
45GO:0051537: 2 iron, 2 sulfur cluster binding1.50E-02
46GO:0022857: transmembrane transporter activity2.16E-02
47GO:0003779: actin binding2.21E-02
48GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.70E-02
49GO:0005525: GTP binding3.36E-02
50GO:0005509: calcium ion binding3.81E-02
51GO:0016301: kinase activity4.59E-02
RankGO TermAdjusted P value
1GO:0019008: molybdopterin synthase complex6.26E-05
2GO:0016363: nuclear matrix9.20E-04
3GO:0010494: cytoplasmic stress granule1.58E-03
4GO:0000159: protein phosphatase type 2A complex2.17E-03
5GO:0071013: catalytic step 2 spliceosome2.17E-03
6GO:0005758: mitochondrial intermembrane space3.49E-03
7GO:0015629: actin cytoskeleton4.50E-03
8GO:0046658: anchored component of plasma membrane5.37E-03
9GO:0005770: late endosome5.59E-03
10GO:0031225: anchored component of membrane6.38E-03
11GO:0031902: late endosome membrane1.34E-02
12GO:0090406: pollen tube1.42E-02
13GO:0005886: plasma membrane1.49E-02
14GO:0005829: cytosol1.58E-02
15GO:0005737: cytoplasm1.85E-02
16GO:0005759: mitochondrial matrix3.11E-02
17GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.84E-02
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Gene type



Gene DE type