Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G58990

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019761: glucosinolate biosynthetic process1.14E-18
2GO:0009098: leucine biosynthetic process2.65E-08
3GO:0009625: response to insect3.73E-07
4GO:0009684: indoleacetic acid biosynthetic process1.12E-05
5GO:0033506: glucosinolate biosynthetic process from homomethionine1.77E-05
6GO:0098542: defense response to other organism3.48E-05
7GO:2000030: regulation of response to red or far red light4.61E-05
8GO:0019752: carboxylic acid metabolic process4.61E-05
9GO:0055114: oxidation-reduction process1.20E-04
10GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.23E-04
11GO:0009067: aspartate family amino acid biosynthetic process1.23E-04
12GO:0035434: copper ion transmembrane transport2.19E-04
13GO:0009088: threonine biosynthetic process3.27E-04
14GO:0009089: lysine biosynthetic process via diaminopimelate7.68E-04
15GO:0010207: photosystem II assembly9.82E-04
16GO:0006825: copper ion transport1.29E-03
17GO:0009411: response to UV1.54E-03
18GO:0010197: polar nucleus fusion1.90E-03
19GO:0006814: sodium ion transport2.00E-03
20GO:0008152: metabolic process2.57E-03
21GO:0009407: toxin catabolic process3.59E-03
22GO:0009735: response to cytokinin3.76E-03
23GO:0009744: response to sucrose4.68E-03
24GO:0009636: response to toxic substance5.07E-03
25GO:0040008: regulation of growth1.04E-02
26GO:0006810: transport1.22E-02
27GO:0009658: chloroplast organization1.46E-02
28GO:0009753: response to jasmonic acid2.36E-02
29GO:0009651: response to salt stress2.80E-02
30GO:0009416: response to light stimulus3.39E-02
31GO:0009611: response to wounding3.44E-02
RankGO TermAdjusted P value
1GO:0080105: 6-methylthiopropyl glucosinolate S-oxygenase activity0.00E+00
2GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity2.55E-08
3GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity2.55E-08
4GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity2.55E-08
5GO:0003862: 3-isopropylmalate dehydrogenase activity2.55E-08
6GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity9.97E-08
7GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity2.44E-07
8GO:0010177: 2-(2'-methylthio)ethylmalate synthase activity1.77E-05
9GO:0004499: N,N-dimethylaniline monooxygenase activity4.75E-05
10GO:0008430: selenium binding8.18E-05
11GO:0003861: 3-isopropylmalate dehydratase activity8.18E-05
12GO:0016597: amino acid binding1.13E-04
13GO:0008508: bile acid:sodium symporter activity1.23E-04
14GO:0004072: aspartate kinase activity1.23E-04
15GO:0005506: iron ion binding1.36E-04
16GO:0016836: hydro-lyase activity1.69E-04
17GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.69E-04
18GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor1.69E-04
19GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.91E-04
20GO:0050661: NADP binding2.36E-04
21GO:0051287: NAD binding3.25E-04
22GO:0019899: enzyme binding3.84E-04
23GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.39E-04
24GO:0005375: copper ion transmembrane transporter activity5.05E-04
25GO:0000287: magnesium ion binding1.28E-03
26GO:0050660: flavin adenine dinucleotide binding1.50E-03
27GO:0004497: monooxygenase activity1.60E-03
28GO:0020037: heme binding2.04E-03
29GO:0048038: quinone binding2.19E-03
30GO:0004364: glutathione transferase activity4.56E-03
31GO:0016740: transferase activity5.01E-03
32GO:0019825: oxygen binding5.84E-03
33GO:0022857: transmembrane transporter activity7.04E-03
34GO:0016746: transferase activity, transferring acyl groups7.49E-03
35GO:0008194: UDP-glycosyltransferase activity1.16E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast3.28E-06
2GO:0009535: chloroplast thylakoid membrane4.63E-06
3GO:0009536: plastid1.98E-04
4GO:0009570: chloroplast stroma5.23E-04
5GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)5.68E-04
6GO:0005789: endoplasmic reticulum membrane1.96E-03
7GO:0010319: stromule2.60E-03
8GO:0009579: thylakoid4.91E-03
9GO:0009543: chloroplast thylakoid lumen8.58E-03
10GO:0016021: integral component of membrane1.78E-02
11GO:0016020: membrane2.02E-02
12GO:0009534: chloroplast thylakoid3.87E-02
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Gene type



Gene DE type