GO Enrichment Analysis of Co-expressed Genes with
AT3G58730
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901799: negative regulation of proteasomal protein catabolic process | 0.00E+00 |
| 2 | GO:0023052: signaling | 0.00E+00 |
| 3 | GO:0006511: ubiquitin-dependent protein catabolic process | 7.25E-32 |
| 4 | GO:0051603: proteolysis involved in cellular protein catabolic process | 6.66E-11 |
| 5 | GO:0046686: response to cadmium ion | 1.13E-08 |
| 6 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 4.18E-08 |
| 7 | GO:0030433: ubiquitin-dependent ERAD pathway | 6.15E-06 |
| 8 | GO:0030163: protein catabolic process | 2.19E-05 |
| 9 | GO:0006102: isocitrate metabolic process | 2.95E-05 |
| 10 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 5.56E-05 |
| 11 | GO:0010043: response to zinc ion | 6.16E-05 |
| 12 | GO:0015798: myo-inositol transport | 6.58E-05 |
| 13 | GO:0042964: thioredoxin reduction | 6.58E-05 |
| 14 | GO:0006123: mitochondrial electron transport, cytochrome c to oxygen | 1.59E-04 |
| 15 | GO:0046939: nucleotide phosphorylation | 1.59E-04 |
| 16 | GO:0006212: uracil catabolic process | 1.59E-04 |
| 17 | GO:0051788: response to misfolded protein | 1.59E-04 |
| 18 | GO:0006101: citrate metabolic process | 1.59E-04 |
| 19 | GO:0019483: beta-alanine biosynthetic process | 1.59E-04 |
| 20 | GO:0010498: proteasomal protein catabolic process | 2.69E-04 |
| 21 | GO:0043617: cellular response to sucrose starvation | 2.69E-04 |
| 22 | GO:0001676: long-chain fatty acid metabolic process | 3.90E-04 |
| 23 | GO:0009647: skotomorphogenesis | 3.90E-04 |
| 24 | GO:0010255: glucose mediated signaling pathway | 3.90E-04 |
| 25 | GO:0071786: endoplasmic reticulum tubular network organization | 3.90E-04 |
| 26 | GO:0010363: regulation of plant-type hypersensitive response | 5.20E-04 |
| 27 | GO:0006097: glyoxylate cycle | 6.60E-04 |
| 28 | GO:0036065: fucosylation | 6.60E-04 |
| 29 | GO:0009697: salicylic acid biosynthetic process | 6.60E-04 |
| 30 | GO:0006564: L-serine biosynthetic process | 6.60E-04 |
| 31 | GO:0043248: proteasome assembly | 8.06E-04 |
| 32 | GO:0009832: plant-type cell wall biogenesis | 8.81E-04 |
| 33 | GO:0009853: photorespiration | 1.05E-03 |
| 34 | GO:0006099: tricarboxylic acid cycle | 1.10E-03 |
| 35 | GO:0010044: response to aluminum ion | 1.12E-03 |
| 36 | GO:0048528: post-embryonic root development | 1.12E-03 |
| 37 | GO:0006744: ubiquinone biosynthetic process | 1.12E-03 |
| 38 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 1.12E-03 |
| 39 | GO:0006631: fatty acid metabolic process | 1.24E-03 |
| 40 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.29E-03 |
| 41 | GO:0043562: cellular response to nitrogen levels | 1.47E-03 |
| 42 | GO:0019430: removal of superoxide radicals | 1.47E-03 |
| 43 | GO:0098656: anion transmembrane transport | 1.65E-03 |
| 44 | GO:0046685: response to arsenic-containing substance | 1.65E-03 |
| 45 | GO:0009821: alkaloid biosynthetic process | 1.65E-03 |
| 46 | GO:0072593: reactive oxygen species metabolic process | 2.26E-03 |
| 47 | GO:0071365: cellular response to auxin stimulus | 2.48E-03 |
| 48 | GO:0006820: anion transport | 2.48E-03 |
| 49 | GO:0006807: nitrogen compound metabolic process | 2.70E-03 |
| 50 | GO:0090351: seedling development | 3.16E-03 |
| 51 | GO:0009969: xyloglucan biosynthetic process | 3.16E-03 |
| 52 | GO:0007030: Golgi organization | 3.16E-03 |
| 53 | GO:0009651: response to salt stress | 3.28E-03 |
| 54 | GO:0009735: response to cytokinin | 3.53E-03 |
| 55 | GO:0042744: hydrogen peroxide catabolic process | 3.59E-03 |
| 56 | GO:0055114: oxidation-reduction process | 3.66E-03 |
| 57 | GO:0008299: isoprenoid biosynthetic process | 3.90E-03 |
| 58 | GO:0061077: chaperone-mediated protein folding | 4.17E-03 |
| 59 | GO:0035428: hexose transmembrane transport | 4.43E-03 |
| 60 | GO:0000413: protein peptidyl-prolyl isomerization | 5.55E-03 |
| 61 | GO:0015991: ATP hydrolysis coupled proton transport | 5.55E-03 |
| 62 | GO:0046323: glucose import | 5.85E-03 |
| 63 | GO:0015986: ATP synthesis coupled proton transport | 6.15E-03 |
| 64 | GO:0009646: response to absence of light | 6.15E-03 |
| 65 | GO:0048825: cotyledon development | 6.45E-03 |
| 66 | GO:0010193: response to ozone | 6.76E-03 |
| 67 | GO:0006914: autophagy | 7.73E-03 |
| 68 | GO:0016579: protein deubiquitination | 8.40E-03 |
| 69 | GO:0009615: response to virus | 8.74E-03 |
| 70 | GO:0006979: response to oxidative stress | 9.76E-03 |
| 71 | GO:0016049: cell growth | 1.02E-02 |
| 72 | GO:0009817: defense response to fungus, incompatible interaction | 1.05E-02 |
| 73 | GO:0009409: response to cold | 1.42E-02 |
| 74 | GO:0009744: response to sucrose | 1.49E-02 |
| 75 | GO:0008283: cell proliferation | 1.49E-02 |
| 76 | GO:0009636: response to toxic substance | 1.62E-02 |
| 77 | GO:0009846: pollen germination | 1.75E-02 |
| 78 | GO:0006812: cation transport | 1.75E-02 |
| 79 | GO:0006486: protein glycosylation | 1.84E-02 |
| 80 | GO:0009736: cytokinin-activated signaling pathway | 1.84E-02 |
| 81 | GO:0048316: seed development | 2.12E-02 |
| 82 | GO:0009620: response to fungus | 2.21E-02 |
| 83 | GO:0009553: embryo sac development | 2.31E-02 |
| 84 | GO:0009058: biosynthetic process | 2.88E-02 |
| 85 | GO:0009790: embryo development | 3.09E-02 |
| 86 | GO:0010150: leaf senescence | 3.49E-02 |
| 87 | GO:0009739: response to gibberellin | 3.78E-02 |
| 88 | GO:0009617: response to bacterium | 3.95E-02 |
| 89 | GO:0042742: defense response to bacterium | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 2 | GO:0003837: beta-ureidopropionase activity | 0.00E+00 |
| 3 | GO:0004298: threonine-type endopeptidase activity | 2.60E-42 |
| 4 | GO:0008233: peptidase activity | 5.17E-26 |
| 5 | GO:0036402: proteasome-activating ATPase activity | 4.18E-08 |
| 6 | GO:0017025: TBP-class protein binding | 2.52E-06 |
| 7 | GO:0016229: steroid dehydrogenase activity | 6.58E-05 |
| 8 | GO:0070401: NADP+ binding | 6.58E-05 |
| 9 | GO:0019786: Atg8-specific protease activity | 6.58E-05 |
| 10 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.59E-04 |
| 11 | GO:0003994: aconitate hydratase activity | 1.59E-04 |
| 12 | GO:0050347: trans-octaprenyltranstransferase activity | 1.59E-04 |
| 13 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 1.59E-04 |
| 14 | GO:0019779: Atg8 activating enzyme activity | 1.59E-04 |
| 15 | GO:0005366: myo-inositol:proton symporter activity | 1.59E-04 |
| 16 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 2.69E-04 |
| 17 | GO:0019201: nucleotide kinase activity | 3.90E-04 |
| 18 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 3.90E-04 |
| 19 | GO:0004659: prenyltransferase activity | 5.20E-04 |
| 20 | GO:0015368: calcium:cation antiporter activity | 5.20E-04 |
| 21 | GO:0015369: calcium:proton antiporter activity | 5.20E-04 |
| 22 | GO:0019776: Atg8 ligase activity | 5.20E-04 |
| 23 | GO:0016887: ATPase activity | 5.62E-04 |
| 24 | GO:0031593: polyubiquitin binding | 8.06E-04 |
| 25 | GO:0102391: decanoate--CoA ligase activity | 9.59E-04 |
| 26 | GO:0004017: adenylate kinase activity | 9.59E-04 |
| 27 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.12E-03 |
| 28 | GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity | 1.12E-03 |
| 29 | GO:0015491: cation:cation antiporter activity | 1.29E-03 |
| 30 | GO:0015288: porin activity | 1.29E-03 |
| 31 | GO:0004033: aldo-keto reductase (NADP) activity | 1.29E-03 |
| 32 | GO:0008308: voltage-gated anion channel activity | 1.47E-03 |
| 33 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.56E-03 |
| 34 | GO:0051287: NAD binding | 1.61E-03 |
| 35 | GO:0008417: fucosyltransferase activity | 1.65E-03 |
| 36 | GO:0000989: transcription factor activity, transcription factor binding | 1.65E-03 |
| 37 | GO:0016844: strictosidine synthase activity | 1.85E-03 |
| 38 | GO:0004161: dimethylallyltranstransferase activity | 2.26E-03 |
| 39 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 2.26E-03 |
| 40 | GO:0004175: endopeptidase activity | 2.93E-03 |
| 41 | GO:0004190: aspartic-type endopeptidase activity | 3.16E-03 |
| 42 | GO:0043130: ubiquitin binding | 3.65E-03 |
| 43 | GO:0005528: FK506 binding | 3.65E-03 |
| 44 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 4.17E-03 |
| 45 | GO:0004540: ribonuclease activity | 4.17E-03 |
| 46 | GO:0004791: thioredoxin-disulfide reductase activity | 6.15E-03 |
| 47 | GO:0005355: glucose transmembrane transporter activity | 6.15E-03 |
| 48 | GO:0005507: copper ion binding | 6.18E-03 |
| 49 | GO:0004601: peroxidase activity | 6.69E-03 |
| 50 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 6.76E-03 |
| 51 | GO:0016597: amino acid binding | 8.40E-03 |
| 52 | GO:0003993: acid phosphatase activity | 1.28E-02 |
| 53 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.36E-02 |
| 54 | GO:0020037: heme binding | 1.72E-02 |
| 55 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.12E-02 |
| 56 | GO:0015144: carbohydrate transmembrane transporter activity | 3.15E-02 |
| 57 | GO:0008565: protein transporter activity | 3.15E-02 |
| 58 | GO:0005516: calmodulin binding | 3.29E-02 |
| 59 | GO:0005351: sugar:proton symporter activity | 3.43E-02 |
| 60 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.13E-02 |
| 61 | GO:0000287: magnesium ion binding | 4.69E-02 |
| 62 | GO:0016788: hydrolase activity, acting on ester bonds | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 8.85E-55 |
| 2 | GO:0005839: proteasome core complex | 2.60E-42 |
| 3 | GO:0019773: proteasome core complex, alpha-subunit complex | 5.52E-24 |
| 4 | GO:0005774: vacuolar membrane | 8.12E-13 |
| 5 | GO:0005829: cytosol | 4.07E-12 |
| 6 | GO:0005773: vacuole | 3.29E-08 |
| 7 | GO:0031597: cytosolic proteasome complex | 7.43E-08 |
| 8 | GO:0031595: nuclear proteasome complex | 1.23E-07 |
| 9 | GO:0022626: cytosolic ribosome | 4.66E-07 |
| 10 | GO:0008540: proteasome regulatory particle, base subcomplex | 5.59E-07 |
| 11 | GO:0005737: cytoplasm | 4.66E-05 |
| 12 | GO:0009510: plasmodesmatal desmotubule | 6.58E-05 |
| 13 | GO:0019774: proteasome core complex, beta-subunit complex | 6.58E-05 |
| 14 | GO:0008541: proteasome regulatory particle, lid subcomplex | 8.19E-05 |
| 15 | GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain | 1.59E-04 |
| 16 | GO:0045271: respiratory chain complex I | 2.02E-04 |
| 17 | GO:0046861: glyoxysomal membrane | 2.69E-04 |
| 18 | GO:0005838: proteasome regulatory particle | 2.69E-04 |
| 19 | GO:0005775: vacuolar lumen | 3.90E-04 |
| 20 | GO:0071782: endoplasmic reticulum tubular network | 3.90E-04 |
| 21 | GO:0005776: autophagosome | 5.20E-04 |
| 22 | GO:0005788: endoplasmic reticulum lumen | 6.87E-04 |
| 23 | GO:0000325: plant-type vacuole | 9.63E-04 |
| 24 | GO:0005783: endoplasmic reticulum | 1.03E-03 |
| 25 | GO:0000421: autophagosome membrane | 1.29E-03 |
| 26 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.29E-03 |
| 27 | GO:0046930: pore complex | 1.47E-03 |
| 28 | GO:0009514: glyoxysome | 1.47E-03 |
| 29 | GO:0031966: mitochondrial membrane | 1.67E-03 |
| 30 | GO:0005747: mitochondrial respiratory chain complex I | 2.18E-03 |
| 31 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 3.16E-03 |
| 32 | GO:0005758: mitochondrial intermembrane space | 3.65E-03 |
| 33 | GO:0070469: respiratory chain | 3.90E-03 |
| 34 | GO:0005759: mitochondrial matrix | 3.95E-03 |
| 35 | GO:0005741: mitochondrial outer membrane | 4.17E-03 |
| 36 | GO:0009705: plant-type vacuole membrane | 4.34E-03 |
| 37 | GO:0031410: cytoplasmic vesicle | 4.43E-03 |
| 38 | GO:0009504: cell plate | 6.45E-03 |
| 39 | GO:0032580: Golgi cisterna membrane | 7.73E-03 |
| 40 | GO:0005819: spindle | 1.32E-02 |
| 41 | GO:0090406: pollen tube | 1.49E-02 |
| 42 | GO:0010008: endosome membrane | 2.12E-02 |
| 43 | GO:0005634: nucleus | 2.41E-02 |
| 44 | GO:0005777: peroxisome | 2.51E-02 |
| 45 | GO:0009524: phragmoplast | 2.88E-02 |
| 46 | GO:0009507: chloroplast | 3.61E-02 |
| 47 | GO:0048046: apoplast | 4.86E-02 |