co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G57480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
2	GO:2001142: nicotinate transport	0.00E+00
3	GO:0034775: glutathione transmembrane transport	0.00E+00
4	GO:0046967: cytosol to ER transport	0.00E+00
5	GO:2001143: N-methylnicotinate transport	0.00E+00
6	GO:0010200: response to chitin	4.72E-13
7	GO:0006955: immune response	4.44E-07
8	GO:0002679: respiratory burst involved in defense response	5.76E-06
9	GO:0010337: regulation of salicylic acid metabolic process	2.72E-05
10	GO:0006751: glutathione catabolic process	2.72E-05
11	GO:0045010: actin nucleation	6.75E-05
12	GO:0051865: protein autoubiquitination	1.05E-04
13	GO:0051180: vitamin transport	1.12E-04
14	GO:0007229: integrin-mediated signaling pathway	1.12E-04
15	GO:0030974: thiamine pyrophosphate transport	1.12E-04
16	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	1.12E-04
17	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.12E-04
18	GO:0050691: regulation of defense response to virus by host	1.12E-04
19	GO:1900384: regulation of flavonol biosynthetic process	1.12E-04
20	GO:0015893: drug transport	2.61E-04
21	GO:0052542: defense response by callose deposition	2.61E-04
22	GO:0046939: nucleotide phosphorylation	2.61E-04
23	GO:0009651: response to salt stress	2.80E-04
24	GO:0006952: defense response	2.90E-04
25	GO:0009695: jasmonic acid biosynthetic process	4.13E-04
26	GO:0009611: response to wounding	4.19E-04
27	GO:0080168: abscisic acid transport	4.32E-04
28	GO:0009620: response to fungus	5.75E-04
29	GO:0030100: regulation of endocytosis	6.19E-04
30	GO:0033014: tetrapyrrole biosynthetic process	6.19E-04
31	GO:0045727: positive regulation of translation	8.23E-04
32	GO:0034440: lipid oxidation	8.23E-04
33	GO:0010107: potassium ion import	8.23E-04
34	GO:0045324: late endosome to vacuole transport	8.23E-04
35	GO:0009164: nucleoside catabolic process	1.04E-03
36	GO:0045487: gibberellin catabolic process	1.04E-03
37	GO:0030041: actin filament polymerization	1.04E-03
38	GO:0048317: seed morphogenesis	1.27E-03
39	GO:1900425: negative regulation of defense response to bacterium	1.27E-03
40	GO:0006979: response to oxidative stress	1.41E-03
41	GO:0006470: protein dephosphorylation	1.50E-03
42	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.52E-03
43	GO:0080086: stamen filament development	1.52E-03
44	GO:0008219: cell death	1.65E-03
45	GO:0070370: cellular heat acclimation	1.78E-03
46	GO:0010161: red light signaling pathway	1.78E-03
47	GO:0009555: pollen development	2.02E-03
48	GO:1900150: regulation of defense response to fungus	2.06E-03
49	GO:2000070: regulation of response to water deprivation	2.06E-03
50	GO:0045087: innate immune response	2.08E-03
51	GO:0009932: cell tip growth	2.35E-03
52	GO:0006970: response to osmotic stress	2.41E-03
53	GO:0090333: regulation of stomatal closure	2.66E-03
54	GO:0006783: heme biosynthetic process	2.66E-03
55	GO:0006779: porphyrin-containing compound biosynthetic process	2.97E-03
56	GO:0008202: steroid metabolic process	2.97E-03
57	GO:0046777: protein autophosphorylation	3.13E-03
58	GO:0031347: regulation of defense response	3.23E-03
59	GO:0006896: Golgi to vacuole transport	3.30E-03
60	GO:0006782: protoporphyrinogen IX biosynthetic process	3.30E-03
61	GO:1903507: negative regulation of nucleic acid-templated transcription	3.65E-03
62	GO:0030148: sphingolipid biosynthetic process	3.65E-03
63	GO:0010015: root morphogenesis	3.65E-03
64	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	4.00E-03
65	GO:0055046: microgametogenesis	4.36E-03
66	GO:0009626: plant-type hypersensitive response	4.52E-03
67	GO:0034605: cellular response to heat	4.74E-03
68	GO:0002237: response to molecule of bacterial origin	4.74E-03
69	GO:0009901: anther dehiscence	5.13E-03
70	GO:0070588: calcium ion transmembrane transport	5.13E-03
71	GO:0009753: response to jasmonic acid	5.15E-03
72	GO:0042742: defense response to bacterium	5.89E-03
73	GO:0009863: salicylic acid mediated signaling pathway	5.93E-03
74	GO:0006468: protein phosphorylation	6.27E-03
75	GO:0048278: vesicle docking	6.78E-03
76	GO:0031408: oxylipin biosynthetic process	6.78E-03
77	GO:0016998: cell wall macromolecule catabolic process	6.78E-03
78	GO:0016226: iron-sulfur cluster assembly	7.22E-03
79	GO:2000022: regulation of jasmonic acid mediated signaling pathway	7.22E-03
80	GO:0009686: gibberellin biosynthetic process	7.67E-03
81	GO:0040007: growth	7.67E-03
82	GO:0019722: calcium-mediated signaling	8.13E-03
83	GO:0042147: retrograde transport, endosome to Golgi	8.60E-03
84	GO:0048653: anther development	9.08E-03
85	GO:0010118: stomatal movement	9.08E-03
86	GO:0009960: endosperm development	9.57E-03
87	GO:0048544: recognition of pollen	1.01E-02
88	GO:0061025: membrane fusion	1.01E-02
89	GO:0006623: protein targeting to vacuole	1.06E-02
90	GO:0002229: defense response to oomycetes	1.11E-02
91	GO:0010193: response to ozone	1.11E-02
92	GO:0006891: intra-Golgi vesicle-mediated transport	1.11E-02
93	GO:0019760: glucosinolate metabolic process	1.27E-02
94	GO:0009639: response to red or far red light	1.27E-02
95	GO:0006904: vesicle docking involved in exocytosis	1.33E-02
96	GO:0001666: response to hypoxia	1.44E-02
97	GO:0006906: vesicle fusion	1.56E-02
98	GO:0015995: chlorophyll biosynthetic process	1.62E-02
99	GO:0006950: response to stress	1.62E-02
100	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.75E-02
101	GO:0009867: jasmonic acid mediated signaling pathway	2.06E-02
102	GO:0006839: mitochondrial transport	2.25E-02
103	GO:0009414: response to water deprivation	2.31E-02
104	GO:0006887: exocytosis	2.32E-02
105	GO:0006897: endocytosis	2.32E-02
106	GO:0009640: photomorphogenesis	2.46E-02
107	GO:0009751: response to salicylic acid	2.47E-02
108	GO:0008643: carbohydrate transport	2.60E-02
109	GO:0006855: drug transmembrane transport	2.75E-02
110	GO:0016567: protein ubiquitination	3.12E-02
111	GO:0010224: response to UV-B	3.12E-02
112	GO:0015031: protein transport	3.21E-02
113	GO:0006357: regulation of transcription from RNA polymerase II promoter	3.31E-02
114	GO:0009409: response to cold	3.47E-02
115	GO:0006810: transport	3.84E-02
116	GO:0009742: brassinosteroid mediated signaling pathway	4.08E-02
117	GO:0035556: intracellular signal transduction	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0005522: profilin binding	0.00E+00
2	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
3	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
4	GO:0090416: nicotinate transporter activity	0.00E+00
5	GO:0003840: gamma-glutamyltransferase activity	2.44E-06
6	GO:0036374: glutathione hydrolase activity	2.44E-06
7	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	5.76E-06
8	GO:0090422: thiamine pyrophosphate transporter activity	1.12E-04
9	GO:0015085: calcium ion transmembrane transporter activity	1.12E-04
10	GO:0090440: abscisic acid transporter activity	1.12E-04
11	GO:0004721: phosphoprotein phosphatase activity	1.22E-04
12	GO:0004103: choline kinase activity	2.61E-04
13	GO:0008883: glutamyl-tRNA reductase activity	2.61E-04
14	GO:0004758: serine C-palmitoyltransferase activity	4.32E-04
15	GO:0046423: allene-oxide cyclase activity	4.32E-04
16	GO:0004383: guanylate cyclase activity	4.32E-04
17	GO:0016165: linoleate 13S-lipoxygenase activity	4.32E-04
18	GO:0019201: nucleotide kinase activity	6.19E-04
19	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	6.19E-04
20	GO:0001653: peptide receptor activity	6.19E-04
21	GO:0043565: sequence-specific DNA binding	8.00E-04
22	GO:0047631: ADP-ribose diphosphatase activity	1.04E-03
23	GO:0000210: NAD+ diphosphatase activity	1.27E-03
24	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	1.52E-03
25	GO:0004017: adenylate kinase activity	1.52E-03
26	GO:0019900: kinase binding	1.52E-03
27	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.91E-03
28	GO:0016301: kinase activity	1.98E-03
29	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.27E-03
30	GO:0008142: oxysterol binding	2.35E-03
31	GO:0004672: protein kinase activity	2.73E-03
32	GO:0047617: acyl-CoA hydrolase activity	2.97E-03
33	GO:0005516: calmodulin binding	3.76E-03
34	GO:0004722: protein serine/threonine phosphatase activity	4.06E-03
35	GO:0005524: ATP binding	4.11E-03
36	GO:0005388: calcium-transporting ATPase activity	4.36E-03
37	GO:0019888: protein phosphatase regulator activity	4.36E-03
38	GO:0003779: actin binding	4.95E-03
39	GO:0009055: electron carrier activity	5.15E-03
40	GO:0004725: protein tyrosine phosphatase activity	5.52E-03
41	GO:0044212: transcription regulatory region DNA binding	5.89E-03
42	GO:0003714: transcription corepressor activity	5.93E-03
43	GO:0019706: protein-cysteine S-palmitoyltransferase activity	6.78E-03
44	GO:0004674: protein serine/threonine kinase activity	7.40E-03
45	GO:0022891: substrate-specific transmembrane transporter activity	7.67E-03
46	GO:0008514: organic anion transmembrane transporter activity	8.13E-03
47	GO:0004842: ubiquitin-protein transferase activity	9.62E-03
48	GO:0016853: isomerase activity	1.01E-02
49	GO:0051015: actin filament binding	1.22E-02
50	GO:0016791: phosphatase activity	1.27E-02
51	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.33E-02
52	GO:0050660: flavin adenine dinucleotide binding	1.58E-02
53	GO:0015238: drug transmembrane transporter activity	1.80E-02
54	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.03E-02
55	GO:0005509: calcium ion binding	2.15E-02
56	GO:0000149: SNARE binding	2.19E-02
57	GO:0050661: NADP binding	2.25E-02
58	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.26E-02
59	GO:0005484: SNAP receptor activity	2.46E-02
60	GO:0035091: phosphatidylinositol binding	2.60E-02
61	GO:0051537: 2 iron, 2 sulfur cluster binding	2.60E-02
62	GO:0008234: cysteine-type peptidase activity	3.27E-02
63	GO:0022857: transmembrane transporter activity	3.75E-02
64	GO:0015035: protein disulfide oxidoreductase activity	3.99E-02
65	GO:0030170: pyridoxal phosphate binding	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0005911: cell-cell junction	1.12E-04
2	GO:0005886: plasma membrane	5.49E-04
3	GO:0070062: extracellular exosome	6.19E-04
4	GO:0005770: late endosome	7.34E-04
5	GO:0030140: trans-Golgi network transport vesicle	1.27E-03
6	GO:0005737: cytoplasm	2.02E-03
7	GO:0031902: late endosome membrane	2.47E-03
8	GO:0000159: protein phosphatase type 2A complex	3.65E-03
9	GO:0005758: mitochondrial intermembrane space	5.93E-03
10	GO:0030136: clathrin-coated vesicle	8.60E-03
11	GO:0000145: exocyst	1.16E-02
12	GO:0009707: chloroplast outer membrane	1.74E-02
13	GO:0005634: nucleus	2.02E-02
14	GO:0031201: SNARE complex	2.32E-02
15	GO:0090406: pollen tube	2.46E-02
16	GO:0009505: plant-type cell wall	3.16E-02
17	GO:0005789: endoplasmic reticulum membrane	4.03E-02
18	GO:0005623: cell	4.68E-02
19	GO:0009524: phragmoplast	4.76E-02
20	GO:0009506: plasmodesma	4.76E-02