co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G56480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046085: adenosine metabolic process	0.00E+00
2	GO:0015822: ornithine transport	0.00E+00
3	GO:0000066: mitochondrial ornithine transport	1.67E-05
4	GO:2001006: regulation of cellulose biosynthetic process	1.67E-05
5	GO:0006432: phenylalanyl-tRNA aminoacylation	4.35E-05
6	GO:0071668: plant-type cell wall assembly	4.35E-05
7	GO:0030010: establishment of cell polarity	4.35E-05
8	GO:0046417: chorismate metabolic process	7.77E-05
9	GO:0006696: ergosterol biosynthetic process	7.77E-05
10	GO:0006760: folic acid-containing compound metabolic process	7.77E-05
11	GO:0016126: sterol biosynthetic process	1.11E-04
12	GO:0045338: farnesyl diphosphate metabolic process	1.17E-04
13	GO:0006749: glutathione metabolic process	1.61E-04
14	GO:0000028: ribosomal small subunit assembly	4.23E-04
15	GO:0009808: lignin metabolic process	4.82E-04
16	GO:0009880: embryonic pattern specification	4.82E-04
17	GO:0042761: very long-chain fatty acid biosynthetic process	6.04E-04
18	GO:0009073: aromatic amino acid family biosynthetic process	7.34E-04
19	GO:0010015: root morphogenesis	7.34E-04
20	GO:0002237: response to molecule of bacterial origin	9.39E-04
21	GO:0034976: response to endoplasmic reticulum stress	1.08E-03
22	GO:0008299: isoprenoid biosynthetic process	1.23E-03
23	GO:0010431: seed maturation	1.31E-03
24	GO:0061077: chaperone-mediated protein folding	1.31E-03
25	GO:0016226: iron-sulfur cluster assembly	1.39E-03
26	GO:0006012: galactose metabolic process	1.47E-03
27	GO:0009793: embryo development ending in seed dormancy	3.02E-03
28	GO:0009407: toxin catabolic process	3.42E-03
29	GO:0010043: response to zinc ion	3.53E-03
30	GO:0048527: lateral root development	3.53E-03
31	GO:0006839: mitochondrial transport	4.11E-03
32	GO:0000154: rRNA modification	4.83E-03
33	GO:0009636: response to toxic substance	4.83E-03
34	GO:0009736: cytokinin-activated signaling pathway	5.48E-03
35	GO:0009790: embryo development	9.10E-03
36	GO:0046686: response to cadmium ion	1.21E-02
37	GO:0009826: unidimensional cell growth	1.36E-02
38	GO:0080167: response to karrikin	1.62E-02
39	GO:0045454: cell redox homeostasis	1.84E-02
40	GO:0032259: methylation	2.07E-02
41	GO:0016042: lipid catabolic process	2.10E-02
42	GO:0048364: root development	2.21E-02
43	GO:0008152: metabolic process	2.29E-02
44	GO:0009734: auxin-activated signaling pathway	2.73E-02
45	GO:0009735: response to cytokinin	3.02E-02
46	GO:0006457: protein folding	3.87E-02
47	GO:0006511: ubiquitin-dependent protein catabolic process	4.01E-02
48	GO:0006414: translational elongation	4.28E-02

Rank	GO Term	Adjusted P value
1	GO:0003838: sterol 24-C-methyltransferase activity	1.67E-05
2	GO:0051996: squalene synthase activity	1.67E-05
3	GO:1990585: hydroxyproline O-arabinosyltransferase activity	4.35E-05
4	GO:0004106: chorismate mutase activity	4.35E-05
5	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	4.35E-05
6	GO:0000064: L-ornithine transmembrane transporter activity	4.35E-05
7	GO:0004826: phenylalanine-tRNA ligase activity	4.35E-05
8	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	4.35E-05
9	GO:0008649: rRNA methyltransferase activity	7.77E-05
10	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.61E-04
11	GO:0008143: poly(A) binding	3.66E-04
12	GO:0004034: aldose 1-epimerase activity	4.23E-04
13	GO:0000049: tRNA binding	8.01E-04
14	GO:0005528: FK506 binding	1.16E-03
15	GO:0004298: threonine-type endopeptidase activity	1.31E-03
16	GO:0003756: protein disulfide isomerase activity	1.56E-03
17	GO:0003746: translation elongation factor activity	3.76E-03
18	GO:0004364: glutathione transferase activity	4.35E-03
19	GO:0043621: protein self-association	4.71E-03
20	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.96E-03
21	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	6.28E-03
22	GO:0004386: helicase activity	7.42E-03
23	GO:0016491: oxidoreductase activity	1.02E-02
24	GO:0003723: RNA binding	1.41E-02
25	GO:0016788: hydrolase activity, acting on ester bonds	1.41E-02
26	GO:0043531: ADP binding	1.49E-02
27	GO:0008233: peptidase activity	1.60E-02
28	GO:0052689: carboxylic ester hydrolase activity	1.74E-02
29	GO:0000166: nucleotide binding	3.22E-02
30	GO:0030246: carbohydrate binding	3.98E-02

Rank	GO Term	Adjusted P value
1	GO:0097361: CIA complex	0.00E+00
2	GO:0005829: cytosol	2.36E-05
3	GO:0005853: eukaryotic translation elongation factor 1 complex	7.77E-05
4	GO:0005801: cis-Golgi network	3.11E-04
5	GO:0019773: proteasome core complex, alpha-subunit complex	4.82E-04
6	GO:0005763: mitochondrial small ribosomal subunit	5.42E-04
7	GO:0005839: proteasome core complex	1.31E-03
8	GO:0005783: endoplasmic reticulum	2.56E-03
9	GO:0005774: vacuolar membrane	5.03E-03
10	GO:0000502: proteasome complex	5.48E-03
11	GO:0016607: nuclear speck	6.28E-03
12	GO:0005834: heterotrimeric G-protein complex	6.42E-03
13	GO:0005789: endoplasmic reticulum membrane	1.18E-02
14	GO:0016021: integral component of membrane	1.43E-02
15	GO:0005737: cytoplasm	1.65E-02
16	GO:0005743: mitochondrial inner membrane	2.03E-02
17	GO:0022626: cytosolic ribosome	3.12E-02
18	GO:0009507: chloroplast	3.48E-02
19	GO:0005773: vacuole	4.12E-02
20	GO:0005802: trans-Golgi network	4.51E-02
21	GO:0005768: endosome	4.94E-02