GO Enrichment Analysis of Co-expressed Genes with
AT3G55520
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045747: positive regulation of Notch signaling pathway | 0.00E+00 |
| 2 | GO:0019279: L-methionine biosynthetic process from L-homoserine via cystathionine | 0.00E+00 |
| 3 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 4 | GO:0034053: modulation by symbiont of host defense-related programmed cell death | 0.00E+00 |
| 5 | GO:0006720: isoprenoid metabolic process | 0.00E+00 |
| 6 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 7 | GO:0046294: formaldehyde catabolic process | 0.00E+00 |
| 8 | GO:1900088: regulation of inositol biosynthetic process | 0.00E+00 |
| 9 | GO:1900091: regulation of raffinose biosynthetic process | 0.00E+00 |
| 10 | GO:0019343: cysteine biosynthetic process via cystathionine | 5.34E-05 |
| 11 | GO:0032956: regulation of actin cytoskeleton organization | 5.34E-05 |
| 12 | GO:0016487: farnesol metabolic process | 5.34E-05 |
| 13 | GO:0043407: negative regulation of MAP kinase activity | 5.34E-05 |
| 14 | GO:0071266: 'de novo' L-methionine biosynthetic process | 5.34E-05 |
| 15 | GO:0019346: transsulfuration | 5.34E-05 |
| 16 | GO:0048571: long-day photoperiodism | 1.30E-04 |
| 17 | GO:0016122: xanthophyll metabolic process | 1.30E-04 |
| 18 | GO:0034051: negative regulation of plant-type hypersensitive response | 2.22E-04 |
| 19 | GO:0009150: purine ribonucleotide metabolic process | 2.22E-04 |
| 20 | GO:0031929: TOR signaling | 2.22E-04 |
| 21 | GO:0010351: lithium ion transport | 2.22E-04 |
| 22 | GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation | 2.22E-04 |
| 23 | GO:0006013: mannose metabolic process | 2.22E-04 |
| 24 | GO:0034613: cellular protein localization | 4.35E-04 |
| 25 | GO:0006221: pyrimidine nucleotide biosynthetic process | 4.35E-04 |
| 26 | GO:0098719: sodium ion import across plasma membrane | 5.52E-04 |
| 27 | GO:0010117: photoprotection | 5.52E-04 |
| 28 | GO:0018344: protein geranylgeranylation | 5.52E-04 |
| 29 | GO:0006796: phosphate-containing compound metabolic process | 6.76E-04 |
| 30 | GO:0033365: protein localization to organelle | 6.76E-04 |
| 31 | GO:0009117: nucleotide metabolic process | 6.76E-04 |
| 32 | GO:0016070: RNA metabolic process | 6.76E-04 |
| 33 | GO:0031053: primary miRNA processing | 6.76E-04 |
| 34 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 8.05E-04 |
| 35 | GO:0034599: cellular response to oxidative stress | 8.46E-04 |
| 36 | GO:0045292: mRNA cis splicing, via spliceosome | 1.08E-03 |
| 37 | GO:0019430: removal of superoxide radicals | 1.23E-03 |
| 38 | GO:0015780: nucleotide-sugar transport | 1.38E-03 |
| 39 | GO:0046685: response to arsenic-containing substance | 1.38E-03 |
| 40 | GO:0051453: regulation of intracellular pH | 1.54E-03 |
| 41 | GO:0006535: cysteine biosynthetic process from serine | 1.71E-03 |
| 42 | GO:0000103: sulfate assimilation | 1.71E-03 |
| 43 | GO:0009688: abscisic acid biosynthetic process | 1.71E-03 |
| 44 | GO:0043085: positive regulation of catalytic activity | 1.88E-03 |
| 45 | GO:0006790: sulfur compound metabolic process | 2.06E-03 |
| 46 | GO:0048440: carpel development | 2.43E-03 |
| 47 | GO:0000162: tryptophan biosynthetic process | 2.83E-03 |
| 48 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.03E-03 |
| 49 | GO:0006487: protein N-linked glycosylation | 3.03E-03 |
| 50 | GO:0019344: cysteine biosynthetic process | 3.03E-03 |
| 51 | GO:0019915: lipid storage | 3.46E-03 |
| 52 | GO:0006662: glycerol ether metabolic process | 4.84E-03 |
| 53 | GO:0006814: sodium ion transport | 5.09E-03 |
| 54 | GO:0008654: phospholipid biosynthetic process | 5.34E-03 |
| 55 | GO:0009851: auxin biosynthetic process | 5.34E-03 |
| 56 | GO:0010193: response to ozone | 5.60E-03 |
| 57 | GO:0030163: protein catabolic process | 6.12E-03 |
| 58 | GO:0006914: autophagy | 6.39E-03 |
| 59 | GO:0071805: potassium ion transmembrane transport | 6.66E-03 |
| 60 | GO:0009853: photorespiration | 1.02E-02 |
| 61 | GO:0008283: cell proliferation | 1.23E-02 |
| 62 | GO:0008643: carbohydrate transport | 1.30E-02 |
| 63 | GO:0009555: pollen development | 1.66E-02 |
| 64 | GO:0000398: mRNA splicing, via spliceosome | 2.15E-02 |
| 65 | GO:0009058: biosynthetic process | 2.37E-02 |
| 66 | GO:0010150: leaf senescence | 2.87E-02 |
| 67 | GO:0006979: response to oxidative stress | 3.38E-02 |
| 68 | GO:0007049: cell cycle | 4.23E-02 |
| 69 | GO:0015031: protein transport | 4.26E-02 |
| 70 | GO:0048366: leaf development | 4.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018738: S-formylglutathione hydrolase activity | 0.00E+00 |
| 2 | GO:0047710: bis(5'-adenosyl)-triphosphatase activity | 0.00E+00 |
| 3 | GO:0052669: CTP:2-trans,-6-trans-farnesol kinase activity | 0.00E+00 |
| 4 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 5 | GO:0052670: geraniol kinase activity | 0.00E+00 |
| 6 | GO:0052668: farnesol kinase activity | 0.00E+00 |
| 7 | GO:0043530: adenosine 5'-monophosphoramidase activity | 0.00E+00 |
| 8 | GO:0052671: geranylgeraniol kinase activity | 0.00E+00 |
| 9 | GO:0047627: adenylylsulfatase activity | 1.59E-06 |
| 10 | GO:0019707: protein-cysteine S-acyltransferase activity | 5.34E-05 |
| 11 | GO:0030611: arsenate reductase activity | 5.34E-05 |
| 12 | GO:0004123: cystathionine gamma-lyase activity | 5.34E-05 |
| 13 | GO:0033549: MAP kinase phosphatase activity | 5.34E-05 |
| 14 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 5.34E-05 |
| 15 | GO:0004121: cystathionine beta-lyase activity | 5.34E-05 |
| 16 | GO:0004725: protein tyrosine phosphatase activity | 1.21E-04 |
| 17 | GO:0003962: cystathionine gamma-synthase activity | 2.22E-04 |
| 18 | GO:0004848: ureidoglycolate hydrolase activity | 2.22E-04 |
| 19 | GO:0004663: Rab geranylgeranyltransferase activity | 2.22E-04 |
| 20 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 3.25E-04 |
| 21 | GO:0000339: RNA cap binding | 3.25E-04 |
| 22 | GO:0009001: serine O-acetyltransferase activity | 3.25E-04 |
| 23 | GO:0004834: tryptophan synthase activity | 4.35E-04 |
| 24 | GO:0016407: acetyltransferase activity | 5.52E-04 |
| 25 | GO:0015081: sodium ion transmembrane transporter activity | 6.76E-04 |
| 26 | GO:0004605: phosphatidate cytidylyltransferase activity | 6.76E-04 |
| 27 | GO:0004784: superoxide dismutase activity | 6.76E-04 |
| 28 | GO:0004559: alpha-mannosidase activity | 8.05E-04 |
| 29 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 9.40E-04 |
| 30 | GO:0004427: inorganic diphosphatase activity | 9.40E-04 |
| 31 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.38E-03 |
| 32 | GO:0071949: FAD binding | 1.38E-03 |
| 33 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.38E-03 |
| 34 | GO:0008047: enzyme activator activity | 1.71E-03 |
| 35 | GO:0015386: potassium:proton antiporter activity | 1.88E-03 |
| 36 | GO:0004129: cytochrome-c oxidase activity | 1.88E-03 |
| 37 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.88E-03 |
| 38 | GO:0015266: protein channel activity | 2.25E-03 |
| 39 | GO:0047134: protein-disulfide reductase activity | 4.36E-03 |
| 40 | GO:0003713: transcription coactivator activity | 4.84E-03 |
| 41 | GO:0004791: thioredoxin-disulfide reductase activity | 5.09E-03 |
| 42 | GO:0016853: isomerase activity | 5.09E-03 |
| 43 | GO:0015385: sodium:proton antiporter activity | 6.12E-03 |
| 44 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.12E-03 |
| 45 | GO:0003824: catalytic activity | 7.65E-03 |
| 46 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.68E-03 |
| 47 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.37E-02 |
| 48 | GO:0022857: transmembrane transporter activity | 1.86E-02 |
| 49 | GO:0015035: protein disulfide oxidoreductase activity | 1.98E-02 |
| 50 | GO:0005515: protein binding | 1.99E-02 |
| 51 | GO:0004386: helicase activity | 2.07E-02 |
| 52 | GO:0030170: pyridoxal phosphate binding | 2.46E-02 |
| 53 | GO:0004252: serine-type endopeptidase activity | 2.46E-02 |
| 54 | GO:0015297: antiporter activity | 2.77E-02 |
| 55 | GO:0008017: microtubule binding | 2.96E-02 |
| 56 | GO:0000287: magnesium ion binding | 3.86E-02 |
| 57 | GO:0016788: hydrolase activity, acting on ester bonds | 3.96E-02 |
| 58 | GO:0016491: oxidoreductase activity | 4.41E-02 |
| 59 | GO:0008233: peptidase activity | 4.50E-02 |
| 60 | GO:0052689: carboxylic ester hydrolase activity | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005845: mRNA cap binding complex | 5.34E-05 |
| 2 | GO:0031932: TORC2 complex | 5.34E-05 |
| 3 | GO:0005846: nuclear cap binding complex | 1.30E-04 |
| 4 | GO:0031931: TORC1 complex | 2.22E-04 |
| 5 | GO:0005968: Rab-protein geranylgeranyltransferase complex | 3.25E-04 |
| 6 | GO:0042646: plastid nucleoid | 3.25E-04 |
| 7 | GO:0009527: plastid outer membrane | 4.35E-04 |
| 8 | GO:0009517: PSII associated light-harvesting complex II | 4.35E-04 |
| 9 | GO:0009840: chloroplastic endopeptidase Clp complex | 8.05E-04 |
| 10 | GO:0000421: autophagosome membrane | 1.08E-03 |
| 11 | GO:0042644: chloroplast nucleoid | 1.38E-03 |
| 12 | GO:0005747: mitochondrial respiratory chain complex I | 1.66E-03 |
| 13 | GO:0005875: microtubule associated complex | 2.83E-03 |
| 14 | GO:0045271: respiratory chain complex I | 3.24E-03 |
| 15 | GO:0009532: plastid stroma | 3.46E-03 |
| 16 | GO:0031410: cytoplasmic vesicle | 3.68E-03 |
| 17 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 4.13E-03 |
| 18 | GO:0005768: endosome | 5.95E-03 |
| 19 | GO:0031969: chloroplast membrane | 6.31E-03 |
| 20 | GO:0032580: Golgi cisterna membrane | 6.39E-03 |
| 21 | GO:0009507: chloroplast | 6.59E-03 |
| 22 | GO:0009295: nucleoid | 6.66E-03 |
| 23 | GO:0005737: cytoplasm | 8.14E-03 |
| 24 | GO:0005643: nuclear pore | 8.68E-03 |
| 25 | GO:0031966: mitochondrial membrane | 1.44E-02 |
| 26 | GO:0016607: nuclear speck | 1.74E-02 |
| 27 | GO:0010008: endosome membrane | 1.74E-02 |
| 28 | GO:0005777: peroxisome | 1.90E-02 |
| 29 | GO:0009534: chloroplast thylakoid | 2.00E-02 |
| 30 | GO:0009570: chloroplast stroma | 2.23E-02 |
| 31 | GO:0005774: vacuolar membrane | 3.26E-02 |
| 32 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.18E-02 |
| 33 | GO:0009505: plant-type cell wall | 4.20E-02 |
| 34 | GO:0005874: microtubule | 4.45E-02 |
| 35 | GO:0009941: chloroplast envelope | 4.74E-02 |