Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G55370

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0050708: regulation of protein secretion0.00E+00
2GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
3GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
4GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process0.00E+00
5GO:0071289: cellular response to nickel ion0.00E+00
6GO:0006862: nucleotide transport0.00E+00
7GO:0034775: glutathione transmembrane transport0.00E+00
8GO:0010200: response to chitin1.40E-06
9GO:0009873: ethylene-activated signaling pathway1.05E-05
10GO:0019760: glucosinolate metabolic process1.47E-04
11GO:0051180: vitamin transport1.58E-04
12GO:0030974: thiamine pyrophosphate transport1.58E-04
13GO:0009865: pollen tube adhesion1.58E-04
14GO:0090421: embryonic meristem initiation1.58E-04
15GO:0052544: defense response by callose deposition in cell wall2.91E-04
16GO:0006811: ion transport3.10E-04
17GO:0010507: negative regulation of autophagy3.60E-04
18GO:0031407: oxylipin metabolic process3.60E-04
19GO:0010289: homogalacturonan biosynthetic process3.60E-04
20GO:0015908: fatty acid transport3.60E-04
21GO:0006898: receptor-mediated endocytosis3.60E-04
22GO:0015893: drug transport3.60E-04
23GO:0046786: viral replication complex formation and maintenance5.89E-04
24GO:0080168: abscisic acid transport5.89E-04
25GO:0042344: indole glucosinolate catabolic process5.89E-04
26GO:0016045: detection of bacterium5.89E-04
27GO:0010359: regulation of anion channel activity5.89E-04
28GO:0090630: activation of GTPase activity5.89E-04
29GO:0010371: regulation of gibberellin biosynthetic process8.43E-04
30GO:0080170: hydrogen peroxide transmembrane transport8.43E-04
31GO:0015700: arsenite transport8.43E-04
32GO:0042147: retrograde transport, endosome to Golgi9.96E-04
33GO:0006952: defense response1.07E-03
34GO:0045088: regulation of innate immune response1.12E-03
35GO:0006351: transcription, DNA-templated1.34E-03
36GO:0045487: gibberellin catabolic process1.41E-03
37GO:0006873: cellular ion homeostasis1.41E-03
38GO:0006891: intra-Golgi vesicle-mediated transport1.41E-03
39GO:0048497: maintenance of floral organ identity1.41E-03
40GO:1900425: negative regulation of defense response to bacterium1.74E-03
41GO:0006751: glutathione catabolic process1.74E-03
42GO:0048280: vesicle fusion with Golgi apparatus2.09E-03
43GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway2.45E-03
44GO:0006955: immune response2.45E-03
45GO:2000070: regulation of response to water deprivation2.84E-03
46GO:0007155: cell adhesion2.84E-03
47GO:0010468: regulation of gene expression2.89E-03
48GO:0006355: regulation of transcription, DNA-templated3.25E-03
49GO:0009880: embryonic pattern specification3.25E-03
50GO:0001708: cell fate specification3.67E-03
51GO:0098656: anion transmembrane transport3.67E-03
52GO:0046685: response to arsenic-containing substance3.67E-03
53GO:0006839: mitochondrial transport3.80E-03
54GO:2000280: regulation of root development4.12E-03
55GO:0007346: regulation of mitotic cell cycle4.12E-03
56GO:0048268: clathrin coat assembly4.12E-03
57GO:0009641: shade avoidance4.58E-03
58GO:0006896: Golgi to vacuole transport4.58E-03
59GO:0010015: root morphogenesis5.05E-03
60GO:0009682: induced systemic resistance5.05E-03
61GO:0010105: negative regulation of ethylene-activated signaling pathway5.55E-03
62GO:0006890: retrograde vesicle-mediated transport, Golgi to ER5.55E-03
63GO:0030048: actin filament-based movement6.06E-03
64GO:0050826: response to freezing6.06E-03
65GO:0018107: peptidyl-threonine phosphorylation6.06E-03
66GO:0006810: transport6.36E-03
67GO:0071732: cellular response to nitric oxide7.13E-03
68GO:0070588: calcium ion transmembrane transport7.13E-03
69GO:0009624: response to nematode8.21E-03
70GO:0009695: jasmonic acid biosynthetic process8.86E-03
71GO:0031408: oxylipin biosynthetic process9.46E-03
72GO:0051321: meiotic cell cycle9.46E-03
73GO:0030245: cellulose catabolic process1.01E-02
74GO:0071369: cellular response to ethylene stimulus1.07E-02
75GO:0009686: gibberellin biosynthetic process1.07E-02
76GO:0010584: pollen exine formation1.14E-02
77GO:0009737: response to abscisic acid1.21E-02
78GO:0042742: defense response to bacterium1.22E-02
79GO:0048868: pollen tube development1.34E-02
80GO:0009646: response to absence of light1.41E-02
81GO:0010150: leaf senescence1.42E-02
82GO:0009749: response to glucose1.48E-02
83GO:0006623: protein targeting to vacuole1.48E-02
84GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.56E-02
85GO:0009617: response to bacterium1.70E-02
86GO:1901657: glycosyl compound metabolic process1.71E-02
87GO:0071281: cellular response to iron ion1.71E-02
88GO:0009639: response to red or far red light1.78E-02
89GO:0009611: response to wounding1.84E-02
90GO:0001666: response to hypoxia2.02E-02
91GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.10E-02
92GO:0006888: ER to Golgi vesicle-mediated transport2.27E-02
93GO:0016049: cell growth2.36E-02
94GO:0006970: response to osmotic stress2.38E-02
95GO:0009817: defense response to fungus, incompatible interaction2.44E-02
96GO:0048767: root hair elongation2.53E-02
97GO:0006865: amino acid transport2.80E-02
98GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.83E-02
99GO:0045087: innate immune response2.89E-02
100GO:0006897: endocytosis3.27E-02
101GO:0006631: fatty acid metabolic process3.27E-02
102GO:0045454: cell redox homeostasis3.28E-02
103GO:0045892: negative regulation of transcription, DNA-templated3.33E-02
104GO:0008283: cell proliferation3.46E-02
105GO:0051707: response to other organism3.46E-02
106GO:0007165: signal transduction3.63E-02
107GO:0006855: drug transmembrane transport3.86E-02
108GO:0000165: MAPK cascade3.96E-02
109GO:0009751: response to salicylic acid3.98E-02
110GO:0009846: pollen germination4.07E-02
111GO:0042538: hyperosmotic salinity response4.07E-02
112GO:0009414: response to water deprivation4.19E-02
113GO:0006468: protein phosphorylation4.34E-02
114GO:0010224: response to UV-B4.38E-02
115GO:0048367: shoot system development4.93E-02
RankGO TermAdjusted P value
1GO:0015215: nucleotide transmembrane transporter activity0.00E+00
2GO:0017048: Rho GTPase binding0.00E+00
3GO:0043565: sequence-specific DNA binding1.59E-05
4GO:0090440: abscisic acid transporter activity1.58E-04
5GO:0090422: thiamine pyrophosphate transporter activity1.58E-04
6GO:0016629: 12-oxophytodienoate reductase activity3.60E-04
7GO:0004103: choline kinase activity3.60E-04
8GO:0015105: arsenite transmembrane transporter activity3.60E-04
9GO:0003700: transcription factor activity, sequence-specific DNA binding5.59E-04
10GO:0003840: gamma-glutamyltransferase activity5.89E-04
11GO:0036374: glutathione hydrolase activity5.89E-04
12GO:0046423: allene-oxide cyclase activity5.89E-04
13GO:0004383: guanylate cyclase activity5.89E-04
14GO:0003883: CTP synthase activity8.43E-04
15GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity8.43E-04
16GO:0001653: peptide receptor activity8.43E-04
17GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity8.43E-04
18GO:0000062: fatty-acyl-CoA binding1.12E-03
19GO:0019137: thioglucosidase activity1.74E-03
20GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.81E-03
21GO:0102483: scopolin beta-glucosidase activity2.38E-03
22GO:0008143: poly(A) binding2.45E-03
23GO:0044212: transcription regulatory region DNA binding3.25E-03
24GO:0008308: voltage-gated anion channel activity3.25E-03
25GO:0008422: beta-glucosidase activity3.64E-03
26GO:0005545: 1-phosphatidylinositol binding4.58E-03
27GO:0004713: protein tyrosine kinase activity4.58E-03
28GO:0005315: inorganic phosphate transmembrane transporter activity6.06E-03
29GO:0005262: calcium channel activity6.06E-03
30GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds6.39E-03
31GO:0008083: growth factor activity6.59E-03
32GO:0042973: glucan endo-1,3-beta-D-glucosidase activity6.59E-03
33GO:0003774: motor activity6.59E-03
34GO:0016301: kinase activity7.59E-03
35GO:0004857: enzyme inhibitor activity8.27E-03
36GO:0051087: chaperone binding8.86E-03
37GO:0004707: MAP kinase activity9.46E-03
38GO:0008514: organic anion transmembrane transporter activity1.14E-02
39GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.33E-02
40GO:0030276: clathrin binding1.34E-02
41GO:0015297: antiporter activity1.36E-02
42GO:0010181: FMN binding1.41E-02
43GO:0005215: transporter activity1.42E-02
44GO:0016722: oxidoreductase activity, oxidizing metal ions1.86E-02
45GO:0004674: protein serine/threonine kinase activity1.89E-02
46GO:0015250: water channel activity2.02E-02
47GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.36E-02
48GO:0005096: GTPase activator activity2.53E-02
49GO:0015238: drug transmembrane transporter activity2.53E-02
50GO:0030246: carbohydrate binding2.61E-02
51GO:0004693: cyclin-dependent protein serine/threonine kinase activity2.62E-02
52GO:0052689: carboxylic ester hydrolase activity3.03E-02
53GO:0000149: SNARE binding3.08E-02
54GO:0005484: SNAP receptor activity3.46E-02
55GO:0051537: 2 iron, 2 sulfur cluster binding3.66E-02
56GO:0035091: phosphatidylinositol binding3.66E-02
57GO:0016298: lipase activity4.38E-02
58GO:0045330: aspartyl esterase activity4.60E-02
59GO:0008234: cysteine-type peptidase activity4.60E-02
60GO:0015171: amino acid transmembrane transporter activity4.60E-02
RankGO TermAdjusted P value
1GO:0070382: exocytic vesicle1.58E-04
2GO:0045177: apical part of cell8.43E-04
3GO:0005801: cis-Golgi network2.09E-03
4GO:0012507: ER to Golgi transport vesicle membrane2.84E-03
5GO:0046658: anchored component of plasma membrane3.30E-03
6GO:0010494: cytoplasmic stress granule3.67E-03
7GO:0031902: late endosome membrane3.95E-03
8GO:0016604: nuclear body4.12E-03
9GO:0005938: cell cortex6.06E-03
10GO:0005743: mitochondrial inner membrane7.90E-03
11GO:0005905: clathrin-coated pit9.46E-03
12GO:0030136: clathrin-coated vesicle1.20E-02
13GO:0005770: late endosome1.34E-02
14GO:0000139: Golgi membrane1.93E-02
15GO:0031225: anchored component of membrane3.13E-02
16GO:0031201: SNARE complex3.27E-02
17GO:0090406: pollen tube3.46E-02
18GO:0005635: nuclear envelope4.49E-02
19GO:0005681: spliceosomal complex4.82E-02
20GO:0016607: nuclear speck4.93E-02
21GO:0010008: endosome membrane4.93E-02
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Gene type



Gene DE type