co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G55360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
2	GO:0042335: cuticle development	2.87E-10
3	GO:0006633: fatty acid biosynthetic process	3.35E-07
4	GO:0006631: fatty acid metabolic process	8.69E-07
5	GO:0010025: wax biosynthetic process	1.08E-06
6	GO:0000038: very long-chain fatty acid metabolic process	4.16E-05
7	GO:0033481: galacturonate biosynthetic process	4.18E-05
8	GO:0009609: response to symbiotic bacterium	4.18E-05
9	GO:0006723: cuticle hydrocarbon biosynthetic process	4.18E-05
10	GO:0080051: cutin transport	4.18E-05
11	GO:0010143: cutin biosynthetic process	6.58E-05
12	GO:0010289: homogalacturonan biosynthetic process	1.04E-04
13	GO:0015908: fatty acid transport	1.04E-04
14	GO:0006081: cellular aldehyde metabolic process	1.78E-04
15	GO:0046168: glycerol-3-phosphate catabolic process	1.78E-04
16	GO:0043447: alkane biosynthetic process	1.78E-04
17	GO:0009062: fatty acid catabolic process	1.78E-04
18	GO:0009409: response to cold	2.23E-04
19	GO:0009413: response to flooding	2.63E-04
20	GO:0006072: glycerol-3-phosphate metabolic process	2.63E-04
21	GO:0010222: stem vascular tissue pattern formation	3.53E-04
22	GO:0010555: response to mannitol	6.58E-04
23	GO:0030497: fatty acid elongation	7.69E-04
24	GO:0050829: defense response to Gram-negative bacterium	7.69E-04
25	GO:1902074: response to salt	7.69E-04
26	GO:0007155: cell adhesion	8.84E-04
27	GO:0008610: lipid biosynthetic process	8.84E-04
28	GO:0042538: hyperosmotic salinity response	9.50E-04
29	GO:0009056: catabolic process	1.13E-03
30	GO:0010345: suberin biosynthetic process	1.13E-03
31	GO:2000280: regulation of root development	1.25E-03
32	GO:0010588: cotyledon vascular tissue pattern formation	1.82E-03
33	GO:0009416: response to light stimulus	1.86E-03
34	GO:0009611: response to wounding	1.92E-03
35	GO:0009225: nucleotide-sugar metabolic process	2.13E-03
36	GO:0009737: response to abscisic acid	2.52E-03
37	GO:0007017: microtubule-based process	2.62E-03
38	GO:0009269: response to desiccation	2.80E-03
39	GO:0048868: pollen tube development	3.91E-03
40	GO:0006970: response to osmotic stress	4.01E-03
41	GO:0050832: defense response to fungus	4.18E-03
42	GO:0008654: phospholipid biosynthetic process	4.31E-03
43	GO:0000302: response to reactive oxygen species	4.51E-03
44	GO:0006635: fatty acid beta-oxidation	4.51E-03
45	GO:0048235: pollen sperm cell differentiation	4.72E-03
46	GO:0010200: response to chitin	4.76E-03
47	GO:0009651: response to salt stress	5.02E-03
48	GO:0006869: lipid transport	6.04E-03
49	GO:0016042: lipid catabolic process	6.60E-03
50	GO:0055114: oxidation-reduction process	6.72E-03
51	GO:0010311: lateral root formation	7.22E-03
52	GO:0006811: ion transport	7.47E-03
53	GO:0005975: carbohydrate metabolic process	7.71E-03
54	GO:0009873: ethylene-activated signaling pathway	8.76E-03
55	GO:0006857: oligopeptide transport	1.27E-02
56	GO:0043086: negative regulation of catalytic activity	1.36E-02
57	GO:0048367: shoot system development	1.39E-02
58	GO:0007623: circadian rhythm	2.29E-02
59	GO:0010150: leaf senescence	2.29E-02
60	GO:0009414: response to water deprivation	2.39E-02
61	GO:0071555: cell wall organization	2.45E-02
62	GO:0010468: regulation of gene expression	2.60E-02
63	GO:0009860: pollen tube growth	3.30E-02
64	GO:0080167: response to karrikin	3.65E-02
65	GO:0046686: response to cadmium ion	3.81E-02
66	GO:0032259: methylation	4.67E-02
67	GO:0009751: response to salicylic acid	4.76E-02
68	GO:0006629: lipid metabolic process	4.81E-02
69	GO:0048364: root development	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0009922: fatty acid elongase activity	7.87E-12
2	GO:0070330: aromatase activity	2.12E-10
3	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	7.07E-09
4	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	7.07E-09
5	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	7.07E-09
6	GO:0018685: alkane 1-monooxygenase activity	7.14E-09
7	GO:0008809: carnitine racemase activity	4.18E-05
8	GO:0031957: very long-chain fatty acid-CoA ligase activity	4.18E-05
9	GO:0015245: fatty acid transporter activity	4.18E-05
10	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.78E-04
11	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	1.78E-04
12	GO:0004165: dodecenoyl-CoA delta-isomerase activity	2.63E-04
13	GO:0008526: phosphatidylinositol transporter activity	3.53E-04
14	GO:0050378: UDP-glucuronate 4-epimerase activity	3.53E-04
15	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	5.51E-04
16	GO:0004029: aldehyde dehydrogenase (NAD) activity	5.51E-04
17	GO:0052689: carboxylic ester hydrolase activity	6.40E-04
18	GO:0102391: decanoate--CoA ligase activity	6.58E-04
19	GO:0004467: long-chain fatty acid-CoA ligase activity	7.69E-04
20	GO:0005506: iron ion binding	7.91E-04
21	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.25E-03
22	GO:0016746: transferase activity, transferring acyl groups	1.46E-03
23	GO:0051087: chaperone binding	2.62E-03
24	GO:0019825: oxygen binding	2.91E-03
25	GO:0016788: hydrolase activity, acting on ester bonds	3.80E-03
26	GO:0003824: catalytic activity	5.11E-03
27	GO:0016791: phosphatase activity	5.15E-03
28	GO:0005200: structural constituent of cytoskeleton	5.36E-03
29	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	6.74E-03
30	GO:0020037: heme binding	8.10E-03
31	GO:0008289: lipid binding	9.45E-03
32	GO:0051287: NAD binding	1.12E-02
33	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.39E-02
34	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.46E-02
35	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.46E-02
36	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.60E-02
37	GO:0046910: pectinesterase inhibitor activity	2.18E-02
38	GO:0005215: transporter activity	2.71E-02
39	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.72E-02
40	GO:0008168: methyltransferase activity	3.05E-02
41	GO:0016491: oxidoreductase activity	3.23E-02
42	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.15E-02
43	GO:0042803: protein homodimerization activity	4.29E-02
44	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.47E-02
45	GO:0003924: GTPase activity	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0046658: anchored component of plasma membrane	9.10E-07
2	GO:0009897: external side of plasma membrane	1.78E-04
3	GO:0016021: integral component of membrane	2.47E-04
4	GO:0009331: glycerol-3-phosphate dehydrogenase complex	2.63E-04
5	GO:0005886: plasma membrane	3.31E-04
6	GO:0031225: anchored component of membrane	5.47E-04
7	GO:0016020: membrane	1.08E-03
8	GO:0045298: tubulin complex	1.13E-03
9	GO:0005783: endoplasmic reticulum	4.12E-03
10	GO:0032580: Golgi cisterna membrane	5.15E-03
11	GO:0009505: plant-type cell wall	6.05E-03
12	GO:0005576: extracellular region	7.46E-03
13	GO:0005773: vacuole	1.01E-02
14	GO:0031966: mitochondrial membrane	1.15E-02
15	GO:0009506: plasmodesma	1.25E-02
16	GO:0005802: trans-Golgi network	1.94E-02
17	GO:0005794: Golgi apparatus	2.10E-02
18	GO:0005768: endosome	2.20E-02
19	GO:0005618: cell wall	2.60E-02
20	GO:0000139: Golgi membrane	3.32E-02
21	GO:0005874: microtubule	3.56E-02
22	GO:0005789: endoplasmic reticulum membrane	3.74E-02
23	GO:0005743: mitochondrial inner membrane	4.57E-02