GO Enrichment Analysis of Co-expressed Genes with
AT3G55170
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007530: sex determination | 0.00E+00 |
| 2 | GO:0046085: adenosine metabolic process | 0.00E+00 |
| 3 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 4 | GO:0015822: ornithine transport | 0.00E+00 |
| 5 | GO:0006412: translation | 1.16E-60 |
| 6 | GO:0042254: ribosome biogenesis | 7.69E-30 |
| 7 | GO:0000028: ribosomal small subunit assembly | 1.48E-04 |
| 8 | GO:0015801: aromatic amino acid transport | 1.86E-04 |
| 9 | GO:0000066: mitochondrial ornithine transport | 1.86E-04 |
| 10 | GO:2001006: regulation of cellulose biosynthetic process | 1.86E-04 |
| 11 | GO:0009245: lipid A biosynthetic process | 2.25E-04 |
| 12 | GO:0000387: spliceosomal snRNP assembly | 2.69E-04 |
| 13 | GO:0006432: phenylalanyl-tRNA aminoacylation | 4.19E-04 |
| 14 | GO:0071668: plant-type cell wall assembly | 4.19E-04 |
| 15 | GO:0034243: regulation of transcription elongation from RNA polymerase II promoter | 4.19E-04 |
| 16 | GO:0032786: positive regulation of DNA-templated transcription, elongation | 6.84E-04 |
| 17 | GO:1904278: positive regulation of wax biosynthetic process | 6.84E-04 |
| 18 | GO:0010452: histone H3-K36 methylation | 6.84E-04 |
| 19 | GO:0006414: translational elongation | 7.24E-04 |
| 20 | GO:0000027: ribosomal large subunit assembly | 7.41E-04 |
| 21 | GO:0006241: CTP biosynthetic process | 9.77E-04 |
| 22 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 9.77E-04 |
| 23 | GO:0006165: nucleoside diphosphate phosphorylation | 9.77E-04 |
| 24 | GO:0006228: UTP biosynthetic process | 9.77E-04 |
| 25 | GO:0070301: cellular response to hydrogen peroxide | 9.77E-04 |
| 26 | GO:0009165: nucleotide biosynthetic process | 1.29E-03 |
| 27 | GO:1900864: mitochondrial RNA modification | 1.29E-03 |
| 28 | GO:0006183: GTP biosynthetic process | 1.29E-03 |
| 29 | GO:0000398: mRNA splicing, via spliceosome | 1.85E-03 |
| 30 | GO:0051568: histone H3-K4 methylation | 2.03E-03 |
| 31 | GO:0000054: ribosomal subunit export from nucleus | 2.43E-03 |
| 32 | GO:0009808: lignin metabolic process | 3.80E-03 |
| 33 | GO:0048589: developmental growth | 4.30E-03 |
| 34 | GO:0009651: response to salt stress | 4.91E-03 |
| 35 | GO:0006325: chromatin organization | 5.36E-03 |
| 36 | GO:0016441: posttranscriptional gene silencing | 5.36E-03 |
| 37 | GO:0016925: protein sumoylation | 6.51E-03 |
| 38 | GO:0009793: embryo development ending in seed dormancy | 6.88E-03 |
| 39 | GO:0010102: lateral root morphogenesis | 7.11E-03 |
| 40 | GO:0010628: positive regulation of gene expression | 7.11E-03 |
| 41 | GO:0006626: protein targeting to mitochondrion | 7.11E-03 |
| 42 | GO:0010020: chloroplast fission | 7.73E-03 |
| 43 | GO:0006446: regulation of translational initiation | 7.73E-03 |
| 44 | GO:0010039: response to iron ion | 8.37E-03 |
| 45 | GO:0009116: nucleoside metabolic process | 9.71E-03 |
| 46 | GO:0003333: amino acid transmembrane transport | 1.11E-02 |
| 47 | GO:0016226: iron-sulfur cluster assembly | 1.19E-02 |
| 48 | GO:0007005: mitochondrion organization | 1.19E-02 |
| 49 | GO:0006397: mRNA processing | 1.23E-02 |
| 50 | GO:0006606: protein import into nucleus | 1.50E-02 |
| 51 | GO:0006633: fatty acid biosynthetic process | 1.63E-02 |
| 52 | GO:0010183: pollen tube guidance | 1.75E-02 |
| 53 | GO:0080156: mitochondrial mRNA modification | 1.83E-02 |
| 54 | GO:0008380: RNA splicing | 2.14E-02 |
| 55 | GO:0010286: heat acclimation | 2.19E-02 |
| 56 | GO:0015031: protein transport | 2.47E-02 |
| 57 | GO:0009910: negative regulation of flower development | 3.19E-02 |
| 58 | GO:0006865: amino acid transport | 3.30E-02 |
| 59 | GO:0006839: mitochondrial transport | 3.74E-02 |
| 60 | GO:0009926: auxin polar transport | 4.08E-02 |
| 61 | GO:0009644: response to high light intensity | 4.31E-02 |
| 62 | GO:0000154: rRNA modification | 4.43E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 1.21E-81 |
| 2 | GO:0003729: mRNA binding | 6.70E-18 |
| 3 | GO:0019843: rRNA binding | 9.07E-08 |
| 4 | GO:0031177: phosphopantetheine binding | 6.24E-05 |
| 5 | GO:0000035: acyl binding | 8.69E-05 |
| 6 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.48E-04 |
| 7 | GO:0001055: RNA polymerase II activity | 2.69E-04 |
| 8 | GO:0001054: RNA polymerase I activity | 3.66E-04 |
| 9 | GO:0000064: L-ornithine transmembrane transporter activity | 4.19E-04 |
| 10 | GO:0004826: phenylalanine-tRNA ligase activity | 4.19E-04 |
| 11 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 4.19E-04 |
| 12 | GO:0015173: aromatic amino acid transmembrane transporter activity | 4.19E-04 |
| 13 | GO:0001056: RNA polymerase III activity | 4.20E-04 |
| 14 | GO:0003697: single-stranded DNA binding | 5.00E-04 |
| 15 | GO:0008649: rRNA methyltransferase activity | 6.84E-04 |
| 16 | GO:0070180: large ribosomal subunit rRNA binding | 6.84E-04 |
| 17 | GO:0004550: nucleoside diphosphate kinase activity | 9.77E-04 |
| 18 | GO:0004749: ribose phosphate diphosphokinase activity | 9.77E-04 |
| 19 | GO:0000993: RNA polymerase II core binding | 1.29E-03 |
| 20 | GO:0005319: lipid transporter activity | 1.29E-03 |
| 21 | GO:0005275: amine transmembrane transporter activity | 1.65E-03 |
| 22 | GO:0031386: protein tag | 1.65E-03 |
| 23 | GO:0003723: RNA binding | 1.80E-03 |
| 24 | GO:0042162: telomeric DNA binding | 2.87E-03 |
| 25 | GO:0043022: ribosome binding | 3.32E-03 |
| 26 | GO:0035064: methylated histone binding | 3.32E-03 |
| 27 | GO:0003746: translation elongation factor activity | 4.19E-03 |
| 28 | GO:0008047: enzyme activator activity | 5.36E-03 |
| 29 | GO:0000049: tRNA binding | 6.51E-03 |
| 30 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 7.26E-03 |
| 31 | GO:0003727: single-stranded RNA binding | 1.34E-02 |
| 32 | GO:0008375: acetylglucosaminyltransferase activity | 2.58E-02 |
| 33 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.88E-02 |
| 34 | GO:0050897: cobalt ion binding | 3.19E-02 |
| 35 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0005840: ribosome | 1.56E-70 |
| 3 | GO:0022626: cytosolic ribosome | 2.26E-46 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 1.99E-41 |
| 5 | GO:0022627: cytosolic small ribosomal subunit | 1.42E-32 |
| 6 | GO:0005737: cytoplasm | 1.84E-15 |
| 7 | GO:0005829: cytosol | 1.67E-14 |
| 8 | GO:0005730: nucleolus | 1.94E-10 |
| 9 | GO:0009506: plasmodesma | 1.37E-07 |
| 10 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.29E-05 |
| 11 | GO:0005774: vacuolar membrane | 4.06E-05 |
| 12 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 1.86E-04 |
| 13 | GO:0032044: DSIF complex | 1.86E-04 |
| 14 | GO:0005736: DNA-directed RNA polymerase I complex | 2.25E-04 |
| 15 | GO:0005666: DNA-directed RNA polymerase III complex | 2.69E-04 |
| 16 | GO:0071011: precatalytic spliceosome | 2.69E-04 |
| 17 | GO:0000418: DNA-directed RNA polymerase IV complex | 3.16E-04 |
| 18 | GO:0071013: catalytic step 2 spliceosome | 3.66E-04 |
| 19 | GO:0035145: exon-exon junction complex | 4.19E-04 |
| 20 | GO:0005697: telomerase holoenzyme complex | 4.19E-04 |
| 21 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.20E-04 |
| 22 | GO:0015934: large ribosomal subunit | 4.45E-04 |
| 23 | GO:0019013: viral nucleocapsid | 4.78E-04 |
| 24 | GO:0005750: mitochondrial respiratory chain complex III | 5.38E-04 |
| 25 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 6.03E-04 |
| 26 | GO:0016020: membrane | 6.52E-04 |
| 27 | GO:0000419: DNA-directed RNA polymerase V complex | 6.69E-04 |
| 28 | GO:0034719: SMN-Sm protein complex | 6.84E-04 |
| 29 | GO:0005853: eukaryotic translation elongation factor 1 complex | 6.84E-04 |
| 30 | GO:0070469: respiratory chain | 8.15E-04 |
| 31 | GO:0005618: cell wall | 8.30E-04 |
| 32 | GO:0015935: small ribosomal subunit | 8.93E-04 |
| 33 | GO:1990726: Lsm1-7-Pat1 complex | 9.77E-04 |
| 34 | GO:0005682: U5 snRNP | 1.29E-03 |
| 35 | GO:0016593: Cdc73/Paf1 complex | 1.29E-03 |
| 36 | GO:0009706: chloroplast inner membrane | 1.55E-03 |
| 37 | GO:0005687: U4 snRNP | 1.65E-03 |
| 38 | GO:0097526: spliceosomal tri-snRNP complex | 1.65E-03 |
| 39 | GO:0005762: mitochondrial large ribosomal subunit | 2.43E-03 |
| 40 | GO:0005689: U12-type spliceosomal complex | 2.43E-03 |
| 41 | GO:0071004: U2-type prespliceosome | 3.32E-03 |
| 42 | GO:0005688: U6 snRNP | 3.32E-03 |
| 43 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 3.80E-03 |
| 44 | GO:0005742: mitochondrial outer membrane translocase complex | 3.80E-03 |
| 45 | GO:0005685: U1 snRNP | 4.30E-03 |
| 46 | GO:0005686: U2 snRNP | 5.36E-03 |
| 47 | GO:0005852: eukaryotic translation initiation factor 3 complex | 5.92E-03 |
| 48 | GO:0009508: plastid chromosome | 7.11E-03 |
| 49 | GO:0005681: spliceosomal complex | 8.59E-03 |
| 50 | GO:0005758: mitochondrial intermembrane space | 9.71E-03 |
| 51 | GO:0009295: nucleoid | 2.19E-02 |
| 52 | GO:0000932: P-body | 2.38E-02 |
| 53 | GO:0009707: chloroplast outer membrane | 2.88E-02 |
| 54 | GO:0009507: chloroplast | 3.39E-02 |
| 55 | GO:0005743: mitochondrial inner membrane | 4.71E-02 |
| 56 | GO:0005622: intracellular | 4.87E-02 |