Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G54900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000030: regulation of response to red or far red light4.37E-06
2GO:0009098: leucine biosynthetic process8.84E-05
3GO:0045037: protein import into chloroplast stroma1.22E-04
4GO:0010207: photosystem II assembly1.46E-04
5GO:0019761: glucosinolate biosynthetic process3.57E-04
6GO:0009407: toxin catabolic process5.53E-04
7GO:0009636: response to toxic substance7.68E-04
8GO:0040008: regulation of growth1.49E-03
9GO:0009735: response to cytokinin4.30E-03
10GO:0015031: protein transport8.80E-03
11GO:0006810: transport9.74E-03
RankGO TermAdjusted P value
1GO:0003861: 3-isopropylmalate dehydratase activity8.33E-06
2GO:0016836: hydro-lyase activity1.91E-05
3GO:0019899: enzyme binding4.94E-05
4GO:0008146: sulfotransferase activity1.59E-04
5GO:0004364: glutathione transferase activity6.94E-04
6GO:0008565: protein transporter activity1.40E-03
7GO:0005506: iron ion binding7.36E-03
8GO:0016491: oxidoreductase activity9.02E-03
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.62E-05
2GO:0009706: chloroplast inner membrane2.05E-05
3GO:0009535: chloroplast thylakoid membrane1.02E-03
4GO:0005623: cell1.27E-03
5GO:0009579: thylakoid5.17E-03
6GO:0005622: intracellular6.79E-03
7GO:0009536: plastid8.58E-03
8GO:0048046: apoplast1.85E-02
9GO:0009941: chloroplast envelope2.23E-02
10GO:0009570: chloroplast stroma2.83E-02
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Gene type



Gene DE type