co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G54470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006167: AMP biosynthetic process	0.00E+00
2	GO:0046040: IMP metabolic process	0.00E+00
3	GO:0044208: 'de novo' AMP biosynthetic process	2.38E-05
4	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	2.38E-05
5	GO:0010476: gibberellin mediated signaling pathway	4.33E-05
6	GO:0010325: raffinose family oligosaccharide biosynthetic process	4.33E-05
7	GO:0009152: purine ribonucleotide biosynthetic process	6.64E-05
8	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	9.27E-05
9	GO:0008295: spermidine biosynthetic process	9.27E-05
10	GO:0009165: nucleotide biosynthetic process	9.27E-05
11	GO:0006544: glycine metabolic process	1.21E-04
12	GO:0009117: nucleotide metabolic process	1.52E-04
13	GO:0006563: L-serine metabolic process	1.52E-04
14	GO:0048444: floral organ morphogenesis	1.85E-04
15	GO:0009231: riboflavin biosynthetic process	2.54E-04
16	GO:0009056: catabolic process	3.29E-04
17	GO:0035999: tetrahydrofolate interconversion	3.67E-04
18	GO:0072593: reactive oxygen species metabolic process	4.48E-04
19	GO:0018119: peptidyl-cysteine S-nitrosylation	4.48E-04
20	GO:0006108: malate metabolic process	5.33E-04
21	GO:0009116: nucleoside metabolic process	7.11E-04
22	GO:0016126: sterol biosynthetic process	1.61E-03
23	GO:0006974: cellular response to DNA damage stimulus	1.73E-03
24	GO:0006099: tricarboxylic acid cycle	2.32E-03
25	GO:0009926: auxin polar transport	2.67E-03
26	GO:0051726: regulation of cell cycle	4.31E-03
27	GO:0009409: response to cold	4.84E-03
28	GO:0046686: response to cadmium ion	5.57E-03
29	GO:0006633: fatty acid biosynthetic process	5.65E-03
30	GO:0009739: response to gibberellin	6.51E-03
31	GO:0045454: cell redox homeostasis	1.08E-02
32	GO:0009408: response to heat	1.25E-02
33	GO:0008152: metabolic process	1.34E-02
34	GO:0042742: defense response to bacterium	3.10E-02
35	GO:0005975: carbohydrate metabolic process	4.18E-02

Rank	GO Term	Adjusted P value
1	GO:0004019: adenylosuccinate synthase activity	0.00E+00
2	GO:0004746: riboflavin synthase activity	0.00E+00
3	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
4	GO:0004056: argininosuccinate lyase activity	0.00E+00
5	GO:0004766: spermidine synthase activity	2.38E-05
6	GO:0010331: gibberellin binding	2.38E-05
7	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	4.33E-05
8	GO:0004749: ribose phosphate diphosphokinase activity	6.64E-05
9	GO:0000254: C-4 methylsterol oxidase activity	6.64E-05
10	GO:0035529: NADH pyrophosphatase activity	6.64E-05
11	GO:0004372: glycine hydroxymethyltransferase activity	1.21E-04
12	GO:0030060: L-malate dehydrogenase activity	1.85E-04
13	GO:0008375: acetylglucosaminyltransferase activity	1.73E-03
14	GO:0051537: 2 iron, 2 sulfur cluster binding	2.81E-03
15	GO:0015035: protein disulfide oxidoreductase activity	4.23E-03
16	GO:0030170: pyridoxal phosphate binding	5.19E-03
17	GO:0016787: hydrolase activity	7.65E-03
18	GO:0009055: electron carrier activity	1.31E-02
19	GO:0005507: copper ion binding	2.41E-02
20	GO:0005525: GTP binding	2.67E-02
21	GO:0003824: catalytic activity	3.31E-02
22	GO:0046872: metal ion binding	3.66E-02
23	GO:0016491: oxidoreductase activity	3.78E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	6.98E-04
2	GO:0009536: plastid	4.39E-03
3	GO:0009507: chloroplast	4.64E-03
4	GO:0005759: mitochondrial matrix	5.65E-03
5	GO:0048046: apoplast	1.30E-02
6	GO:0005840: ribosome	3.21E-02
7	GO:0005789: endoplasmic reticulum membrane	4.20E-02