co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G52720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009715: chalcone biosynthetic process	0.00E+00
2	GO:0009629: response to gravity	2.19E-05
3	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	6.14E-05
4	GO:0009765: photosynthesis, light harvesting	8.58E-05
5	GO:0006656: phosphatidylcholine biosynthetic process	1.12E-04
6	GO:0009645: response to low light intensity stimulus	2.04E-04
7	GO:0009769: photosynthesis, light harvesting in photosystem II	2.04E-04
8	GO:0031540: regulation of anthocyanin biosynthetic process	2.37E-04
9	GO:0009642: response to light intensity	2.37E-04
10	GO:0009821: alkaloid biosynthetic process	3.07E-04
11	GO:0000373: Group II intron splicing	3.07E-04
12	GO:0009098: leucine biosynthetic process	3.43E-04
13	GO:0009768: photosynthesis, light harvesting in photosystem I	7.09E-04
14	GO:0009269: response to desiccation	7.53E-04
15	GO:0006606: protein import into nucleus	9.85E-04
16	GO:0019761: glucosinolate biosynthetic process	1.23E-03
17	GO:0009416: response to light stimulus	1.62E-03
18	GO:0018298: protein-chromophore linkage	1.79E-03
19	GO:0009817: defense response to fungus, incompatible interaction	1.79E-03
20	GO:0009813: flavonoid biosynthetic process	1.85E-03
21	GO:0010218: response to far red light	1.91E-03
22	GO:0006811: ion transport	1.91E-03
23	GO:0009637: response to blue light	2.10E-03
24	GO:0010114: response to red light	2.49E-03
25	GO:0009926: auxin polar transport	2.49E-03
26	GO:0009644: response to high light intensity	2.62E-03
27	GO:0010224: response to UV-B	3.11E-03
28	GO:0009733: response to auxin	3.63E-03
29	GO:0009058: biosynthetic process	4.67E-03
30	GO:0006810: transport	4.73E-03
31	GO:0009658: chloroplast organization	7.59E-03
32	GO:0015979: photosynthesis	9.68E-03
33	GO:0032259: methylation	1.13E-02
34	GO:0009753: response to jasmonic acid	1.22E-02
35	GO:0008152: metabolic process	1.24E-02
36	GO:0009611: response to wounding	1.77E-02
37	GO:0055114: oxidation-reduction process	2.57E-02
38	GO:0006979: response to oxidative stress	2.90E-02
39	GO:0009409: response to cold	3.58E-02

Rank	GO Term	Adjusted P value
1	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
2	GO:0004451: isocitrate lyase activity	8.12E-06
3	GO:0000234: phosphoethanolamine N-methyltransferase activity	2.19E-05
4	GO:0003861: 3-isopropylmalate dehydratase activity	3.99E-05
5	GO:0016836: hydro-lyase activity	8.58E-05
6	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	8.58E-05
7	GO:0000293: ferric-chelate reductase activity	1.41E-04
8	GO:0016844: strictosidine synthase activity	3.43E-04
9	GO:0031409: pigment binding	6.22E-04
10	GO:0048038: quinone binding	1.18E-03
11	GO:0016168: chlorophyll binding	1.56E-03
12	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.73E-03
13	GO:0016491: oxidoreductase activity	4.25E-03
14	GO:0008565: protein transporter activity	5.09E-03
15	GO:0003824: catalytic activity	3.08E-02

Rank	GO Term	Adjusted P value
1	GO:0009517: PSII associated light-harvesting complex II	8.58E-05
2	GO:0009535: chloroplast thylakoid membrane	1.02E-04
3	GO:0009507: chloroplast	2.75E-04
4	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.07E-04
5	GO:0030076: light-harvesting complex	5.80E-04
6	GO:0009522: photosystem I	1.08E-03
7	GO:0009523: photosystem II	1.13E-03
8	GO:0010287: plastoglobule	4.34E-03
9	GO:0009705: plant-type vacuole membrane	5.61E-03
10	GO:0009941: chloroplast envelope	1.52E-02
11	GO:0009579: thylakoid	1.98E-02
12	GO:0009534: chloroplast thylakoid	1.99E-02
13	GO:0009570: chloroplast stroma	2.12E-02
14	GO:0005783: endoplasmic reticulum	2.26E-02
15	GO:0005622: intracellular	2.62E-02
16	GO:0009536: plastid	3.33E-02
17	GO:0009505: plant-type cell wall	3.39E-02