co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G52470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1903086: negative regulation of sinapate ester biosynthetic process	0.00E+00
2	GO:0006862: nucleotide transport	0.00E+00
3	GO:0042353: fucose biosynthetic process	0.00E+00
4	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
5	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
6	GO:0010200: response to chitin	1.38E-09
7	GO:0002679: respiratory burst involved in defense response	7.85E-06
8	GO:2000070: regulation of response to water deprivation	8.88E-05
9	GO:0051180: vitamin transport	1.33E-04
10	GO:0030974: thiamine pyrophosphate transport	1.33E-04
11	GO:0050691: regulation of defense response to virus by host	1.33E-04
12	GO:0009966: regulation of signal transduction	1.33E-04
13	GO:0051865: protein autoubiquitination	1.37E-04
14	GO:0010015: root morphogenesis	2.29E-04
15	GO:0046939: nucleotide phosphorylation	3.07E-04
16	GO:0042754: negative regulation of circadian rhythm	3.07E-04
17	GO:0015893: drug transport	3.07E-04
18	GO:0070588: calcium ion transmembrane transport	3.84E-04
19	GO:0009863: salicylic acid mediated signaling pathway	4.74E-04
20	GO:0070475: rRNA base methylation	5.06E-04
21	GO:0080168: abscisic acid transport	5.06E-04
22	GO:0010253: UDP-rhamnose biosynthetic process	5.06E-04
23	GO:0006952: defense response	5.73E-04
24	GO:0030100: regulation of endocytosis	7.24E-04
25	GO:0009399: nitrogen fixation	7.24E-04
26	GO:0033014: tetrapyrrole biosynthetic process	7.24E-04
27	GO:1902347: response to strigolactone	9.59E-04
28	GO:0048544: recognition of pollen	9.89E-04
29	GO:0009823: cytokinin catabolic process	1.21E-03
30	GO:0045487: gibberellin catabolic process	1.21E-03
31	GO:2000762: regulation of phenylpropanoid metabolic process	1.21E-03
32	GO:0010256: endomembrane system organization	1.49E-03
33	GO:0000470: maturation of LSU-rRNA	1.49E-03
34	GO:0010337: regulation of salicylic acid metabolic process	1.49E-03
35	GO:0007166: cell surface receptor signaling pathway	2.03E-03
36	GO:0010161: red light signaling pathway	2.09E-03
37	GO:0006955: immune response	2.09E-03
38	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	2.09E-03
39	GO:0009737: response to abscisic acid	2.31E-03
40	GO:1900150: regulation of defense response to fungus	2.42E-03
41	GO:0009690: cytokinin metabolic process	2.42E-03
42	GO:0045010: actin nucleation	2.42E-03
43	GO:0048658: anther wall tapetum development	2.42E-03
44	GO:0009699: phenylpropanoid biosynthetic process	2.77E-03
45	GO:0009932: cell tip growth	2.77E-03
46	GO:0006839: mitochondrial transport	3.00E-03
47	GO:0009611: response to wounding	3.02E-03
48	GO:0098656: anion transmembrane transport	3.13E-03
49	GO:0006783: heme biosynthetic process	3.13E-03
50	GO:0006779: porphyrin-containing compound biosynthetic process	3.50E-03
51	GO:0006468: protein phosphorylation	3.86E-03
52	GO:0010192: mucilage biosynthetic process	3.89E-03
53	GO:0006782: protoporphyrinogen IX biosynthetic process	3.89E-03
54	GO:0019538: protein metabolic process	3.89E-03
55	GO:0007064: mitotic sister chromatid cohesion	3.89E-03
56	GO:0048829: root cap development	3.89E-03
57	GO:0080167: response to karrikin	3.91E-03
58	GO:0046686: response to cadmium ion	4.65E-03
59	GO:0010224: response to UV-B	4.72E-03
60	GO:0055046: microgametogenesis	5.15E-03
61	GO:0006351: transcription, DNA-templated	5.35E-03
62	GO:0002237: response to molecule of bacterial origin	5.60E-03
63	GO:0009620: response to fungus	5.92E-03
64	GO:0009969: xyloglucan biosynthetic process	6.06E-03
65	GO:0010167: response to nitrate	6.06E-03
66	GO:0071732: cellular response to nitric oxide	6.06E-03
67	GO:0009695: jasmonic acid biosynthetic process	7.51E-03
68	GO:0016998: cell wall macromolecule catabolic process	8.02E-03
69	GO:0042742: defense response to bacterium	8.53E-03
70	GO:0030245: cellulose catabolic process	8.55E-03
71	GO:0016226: iron-sulfur cluster assembly	8.55E-03
72	GO:0030433: ubiquitin-dependent ERAD pathway	8.55E-03
73	GO:0071215: cellular response to abscisic acid stimulus	9.08E-03
74	GO:0009686: gibberellin biosynthetic process	9.08E-03
75	GO:0071369: cellular response to ethylene stimulus	9.08E-03
76	GO:0006357: regulation of transcription from RNA polymerase II promoter	9.16E-03
77	GO:0010214: seed coat development	9.63E-03
78	GO:0045492: xylan biosynthetic process	9.63E-03
79	GO:0006817: phosphate ion transport	9.63E-03
80	GO:0016310: phosphorylation	1.02E-02
81	GO:0042631: cellular response to water deprivation	1.08E-02
82	GO:0007623: circadian rhythm	1.12E-02
83	GO:0009749: response to glucose	1.25E-02
84	GO:0009617: response to bacterium	1.34E-02
85	GO:0035556: intracellular signal transduction	1.42E-02
86	GO:1901657: glycosyl compound metabolic process	1.44E-02
87	GO:0071281: cellular response to iron ion	1.44E-02
88	GO:0010090: trichome morphogenesis	1.44E-02
89	GO:0009639: response to red or far red light	1.51E-02
90	GO:0006810: transport	1.52E-02
91	GO:0001666: response to hypoxia	1.71E-02
92	GO:0009615: response to virus	1.71E-02
93	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.78E-02
94	GO:0006970: response to osmotic stress	1.88E-02
95	GO:0015995: chlorophyll biosynthetic process	1.92E-02
96	GO:0048573: photoperiodism, flowering	1.92E-02
97	GO:0006355: regulation of transcription, DNA-templated	2.02E-02
98	GO:0008219: cell death	2.06E-02
99	GO:0010311: lateral root formation	2.14E-02
100	GO:0009637: response to blue light	2.44E-02
101	GO:0045892: negative regulation of transcription, DNA-templated	2.63E-02
102	GO:0006897: endocytosis	2.76E-02
103	GO:0008283: cell proliferation	2.92E-02
104	GO:0008643: carbohydrate transport	3.09E-02
105	GO:0009414: response to water deprivation	3.13E-02
106	GO:0009751: response to salicylic acid	3.14E-02
107	GO:0009965: leaf morphogenesis	3.18E-02
108	GO:0006979: response to oxidative stress	3.26E-02
109	GO:0006855: drug transmembrane transport	3.26E-02
110	GO:0031347: regulation of defense response	3.35E-02
111	GO:0009753: response to jasmonic acid	3.42E-02
112	GO:0009809: lignin biosynthetic process	3.62E-02
113	GO:0006857: oligopeptide transport	3.80E-02
114	GO:0043086: negative regulation of catalytic activity	4.07E-02
115	GO:0009873: ethylene-activated signaling pathway	4.11E-02
116	GO:0009626: plant-type hypersensitive response	4.26E-02
117	GO:0016567: protein ubiquitination	4.44E-02
118	GO:0009624: response to nematode	4.65E-02
119	GO:0009409: response to cold	4.68E-02
120	GO:0018105: peptidyl-serine phosphorylation	4.74E-02
121	GO:0009742: brassinosteroid mediated signaling pathway	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
2	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
3	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
4	GO:0005522: profilin binding	0.00E+00
5	GO:0043565: sequence-specific DNA binding	1.27E-04
6	GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	1.33E-04
7	GO:0090422: thiamine pyrophosphate transporter activity	1.33E-04
8	GO:0015085: calcium ion transmembrane transporter activity	1.33E-04
9	GO:0090440: abscisic acid transporter activity	1.33E-04
10	GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity	1.33E-04
11	GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity	1.33E-04
12	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.41E-04
13	GO:0008460: dTDP-glucose 4,6-dehydratase activity	3.07E-04
14	GO:0010280: UDP-L-rhamnose synthase activity	3.07E-04
15	GO:0050377: UDP-glucose 4,6-dehydratase activity	3.07E-04
16	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	3.07E-04
17	GO:0004103: choline kinase activity	3.07E-04
18	GO:0008883: glutamyl-tRNA reductase activity	3.07E-04
19	GO:0046423: allene-oxide cyclase activity	5.06E-04
20	GO:0019201: nucleotide kinase activity	7.24E-04
21	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	7.24E-04
22	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	7.24E-04
23	GO:0008514: organic anion transmembrane transporter activity	7.38E-04
24	GO:0043015: gamma-tubulin binding	9.59E-04
25	GO:0019139: cytokinin dehydrogenase activity	1.21E-03
26	GO:0018685: alkane 1-monooxygenase activity	1.21E-03
27	GO:0002020: protease binding	1.21E-03
28	GO:0004356: glutamate-ammonia ligase activity	1.21E-03
29	GO:0035673: oligopeptide transmembrane transporter activity	1.49E-03
30	GO:0004017: adenylate kinase activity	1.78E-03
31	GO:0004143: diacylglycerol kinase activity	2.09E-03
32	GO:0016621: cinnamoyl-CoA reductase activity	2.09E-03
33	GO:0008143: poly(A) binding	2.09E-03
34	GO:0003951: NAD+ kinase activity	2.77E-03
35	GO:0003678: DNA helicase activity	3.13E-03
36	GO:0050660: flavin adenine dinucleotide binding	3.58E-03
37	GO:0004713: protein tyrosine kinase activity	3.89E-03
38	GO:0015198: oligopeptide transporter activity	4.72E-03
39	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.91E-03
40	GO:0005262: calcium channel activity	5.15E-03
41	GO:0019888: protein phosphatase regulator activity	5.15E-03
42	GO:0005388: calcium-transporting ATPase activity	5.15E-03
43	GO:0005315: inorganic phosphate transmembrane transporter activity	5.15E-03
44	GO:0005516: calmodulin binding	5.44E-03
45	GO:0008131: primary amine oxidase activity	5.60E-03
46	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	5.63E-03
47	GO:0051087: chaperone binding	7.51E-03
48	GO:0019706: protein-cysteine S-palmitoyltransferase activity	8.02E-03
49	GO:0044212: transcription regulatory region DNA binding	8.53E-03
50	GO:0016301: kinase activity	9.71E-03
51	GO:0005524: ATP binding	9.95E-03
52	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.04E-02
53	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.05E-02
54	GO:0050662: coenzyme binding	1.19E-02
55	GO:0051015: actin filament binding	1.44E-02
56	GO:0003682: chromatin binding	1.84E-02
57	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.85E-02
58	GO:0102483: scopolin beta-glucosidase activity	1.92E-02
59	GO:0030247: polysaccharide binding	1.92E-02
60	GO:0004721: phosphoprotein phosphatase activity	1.92E-02
61	GO:0004683: calmodulin-dependent protein kinase activity	1.92E-02
62	GO:0030246: carbohydrate binding	1.93E-02
63	GO:0015238: drug transmembrane transporter activity	2.14E-02
64	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.60E-02
65	GO:0008422: beta-glucosidase activity	2.60E-02
66	GO:0050661: NADP binding	2.68E-02
67	GO:0051537: 2 iron, 2 sulfur cluster binding	3.09E-02
68	GO:0043621: protein self-association	3.09E-02
69	GO:0004674: protein serine/threonine kinase activity	3.34E-02
70	GO:0009055: electron carrier activity	3.42E-02
71	GO:0003824: catalytic activity	3.62E-02
72	GO:0031625: ubiquitin protein ligase binding	3.89E-02
73	GO:0003779: actin binding	4.55E-02
74	GO:0004842: ubiquitin-protein transferase activity	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0005911: cell-cell junction	1.33E-04
2	GO:0005743: mitochondrial inner membrane	1.10E-03
3	GO:0030173: integral component of Golgi membrane	1.78E-03
4	GO:0016363: nuclear matrix	1.78E-03
5	GO:0010494: cytoplasmic stress granule	3.13E-03
6	GO:0016021: integral component of membrane	3.35E-03
7	GO:0005886: plasma membrane	3.93E-03
8	GO:0005758: mitochondrial intermembrane space	7.01E-03
9	GO:0005768: endosome	7.27E-03
10	GO:0030136: clathrin-coated vesicle	1.02E-02
11	GO:0005770: late endosome	1.13E-02
12	GO:0032580: Golgi cisterna membrane	1.51E-02
13	GO:0005778: peroxisomal membrane	1.57E-02
14	GO:0005802: trans-Golgi network	2.41E-02
15	GO:0005794: Golgi apparatus	2.66E-02
16	GO:0031902: late endosome membrane	2.76E-02
17	GO:0009536: plastid	4.15E-02
18	GO:0010008: endosome membrane	4.17E-02
19	GO:0005887: integral component of plasma membrane	4.32E-02
20	GO:0009706: chloroplast inner membrane	4.65E-02