GO Enrichment Analysis of Co-expressed Genes with
AT3G52180
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 3 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 4 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 5 | GO:0000025: maltose catabolic process | 0.00E+00 |
| 6 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 7 | GO:0005980: glycogen catabolic process | 0.00E+00 |
| 8 | GO:0009735: response to cytokinin | 8.80E-12 |
| 9 | GO:0006412: translation | 2.52E-06 |
| 10 | GO:0009409: response to cold | 5.26E-05 |
| 11 | GO:0032544: plastid translation | 6.09E-05 |
| 12 | GO:0043489: RNA stabilization | 8.96E-05 |
| 13 | GO:0044262: cellular carbohydrate metabolic process | 8.96E-05 |
| 14 | GO:0000023: maltose metabolic process | 8.96E-05 |
| 15 | GO:0005983: starch catabolic process | 1.50E-04 |
| 16 | GO:0042742: defense response to bacterium | 1.59E-04 |
| 17 | GO:0005976: polysaccharide metabolic process | 2.12E-04 |
| 18 | GO:0042254: ribosome biogenesis | 2.13E-04 |
| 19 | GO:0048281: inflorescence morphogenesis | 3.54E-04 |
| 20 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.10E-04 |
| 21 | GO:0010731: protein glutathionylation | 5.10E-04 |
| 22 | GO:0006241: CTP biosynthetic process | 5.10E-04 |
| 23 | GO:0006165: nucleoside diphosphate phosphorylation | 5.10E-04 |
| 24 | GO:0006228: UTP biosynthetic process | 5.10E-04 |
| 25 | GO:0010148: transpiration | 5.10E-04 |
| 26 | GO:2000122: negative regulation of stomatal complex development | 6.78E-04 |
| 27 | GO:0010021: amylopectin biosynthetic process | 6.78E-04 |
| 28 | GO:0010037: response to carbon dioxide | 6.78E-04 |
| 29 | GO:0015976: carbon utilization | 6.78E-04 |
| 30 | GO:0006183: GTP biosynthetic process | 6.78E-04 |
| 31 | GO:0045727: positive regulation of translation | 6.78E-04 |
| 32 | GO:0006461: protein complex assembly | 8.59E-04 |
| 33 | GO:0000470: maturation of LSU-rRNA | 1.05E-03 |
| 34 | GO:0009817: defense response to fungus, incompatible interaction | 1.24E-03 |
| 35 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.25E-03 |
| 36 | GO:0070370: cellular heat acclimation | 1.46E-03 |
| 37 | GO:0010103: stomatal complex morphogenesis | 1.46E-03 |
| 38 | GO:0030091: protein repair | 1.69E-03 |
| 39 | GO:0006353: DNA-templated transcription, termination | 1.69E-03 |
| 40 | GO:0001558: regulation of cell growth | 1.93E-03 |
| 41 | GO:0009657: plastid organization | 1.93E-03 |
| 42 | GO:0006783: heme biosynthetic process | 2.18E-03 |
| 43 | GO:0015979: photosynthesis | 2.33E-03 |
| 44 | GO:0045454: cell redox homeostasis | 2.47E-03 |
| 45 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.70E-03 |
| 46 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.98E-03 |
| 47 | GO:0009773: photosynthetic electron transport in photosystem I | 2.98E-03 |
| 48 | GO:0006006: glucose metabolic process | 3.56E-03 |
| 49 | GO:0009414: response to water deprivation | 3.60E-03 |
| 50 | GO:0008152: metabolic process | 3.65E-03 |
| 51 | GO:0009266: response to temperature stimulus | 3.86E-03 |
| 52 | GO:0010143: cutin biosynthetic process | 3.86E-03 |
| 53 | GO:0010020: chloroplast fission | 3.86E-03 |
| 54 | GO:0019253: reductive pentose-phosphate cycle | 3.86E-03 |
| 55 | GO:0055114: oxidation-reduction process | 4.37E-03 |
| 56 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.83E-03 |
| 57 | GO:0051017: actin filament bundle assembly | 4.83E-03 |
| 58 | GO:0006289: nucleotide-excision repair | 4.83E-03 |
| 59 | GO:0000027: ribosomal large subunit assembly | 4.83E-03 |
| 60 | GO:0051302: regulation of cell division | 5.17E-03 |
| 61 | GO:0007017: microtubule-based process | 5.17E-03 |
| 62 | GO:0061077: chaperone-mediated protein folding | 5.52E-03 |
| 63 | GO:0009411: response to UV | 6.23E-03 |
| 64 | GO:0001944: vasculature development | 6.23E-03 |
| 65 | GO:0046686: response to cadmium ion | 7.31E-03 |
| 66 | GO:0015986: ATP synthesis coupled proton transport | 8.17E-03 |
| 67 | GO:0007018: microtubule-based movement | 8.17E-03 |
| 68 | GO:0019252: starch biosynthetic process | 8.58E-03 |
| 69 | GO:0000302: response to reactive oxygen species | 8.99E-03 |
| 70 | GO:0015995: chlorophyll biosynthetic process | 1.31E-02 |
| 71 | GO:0010119: regulation of stomatal movement | 1.56E-02 |
| 72 | GO:0009631: cold acclimation | 1.56E-02 |
| 73 | GO:0045087: innate immune response | 1.66E-02 |
| 74 | GO:0034599: cellular response to oxidative stress | 1.72E-02 |
| 75 | GO:0016042: lipid catabolic process | 1.80E-02 |
| 76 | GO:0042542: response to hydrogen peroxide | 1.93E-02 |
| 77 | GO:0009965: leaf morphogenesis | 2.16E-02 |
| 78 | GO:0009664: plant-type cell wall organization | 2.34E-02 |
| 79 | GO:0006364: rRNA processing | 2.46E-02 |
| 80 | GO:0009585: red, far-red light phototransduction | 2.46E-02 |
| 81 | GO:0005975: carbohydrate metabolic process | 2.76E-02 |
| 82 | GO:0006096: glycolytic process | 2.77E-02 |
| 83 | GO:0009624: response to nematode | 3.16E-02 |
| 84 | GO:0006396: RNA processing | 3.23E-02 |
| 85 | GO:0042744: hydrogen peroxide catabolic process | 4.07E-02 |
| 86 | GO:0009793: embryo development ending in seed dormancy | 4.63E-02 |
| 87 | GO:0007623: circadian rhythm | 4.67E-02 |
| 88 | GO:0009451: RNA modification | 4.74E-02 |
| 89 | GO:0016310: phosphorylation | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004134: 4-alpha-glucanotransferase activity | 0.00E+00 |
| 2 | GO:0004645: phosphorylase activity | 0.00E+00 |
| 3 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 4 | GO:0008184: glycogen phosphorylase activity | 0.00E+00 |
| 5 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 6 | GO:0019843: rRNA binding | 5.34E-11 |
| 7 | GO:0003735: structural constituent of ribosome | 2.21E-08 |
| 8 | GO:0051920: peroxiredoxin activity | 1.57E-07 |
| 9 | GO:0016209: antioxidant activity | 4.01E-07 |
| 10 | GO:0008266: poly(U) RNA binding | 4.19E-06 |
| 11 | GO:0004856: xylulokinase activity | 8.96E-05 |
| 12 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 8.96E-05 |
| 13 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 8.96E-05 |
| 14 | GO:0004853: uroporphyrinogen decarboxylase activity | 8.96E-05 |
| 15 | GO:0004601: peroxidase activity | 2.07E-04 |
| 16 | GO:0018708: thiol S-methyltransferase activity | 2.12E-04 |
| 17 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.12E-04 |
| 18 | GO:0004618: phosphoglycerate kinase activity | 2.12E-04 |
| 19 | GO:0010297: heteropolysaccharide binding | 2.12E-04 |
| 20 | GO:0033201: alpha-1,4-glucan synthase activity | 2.12E-04 |
| 21 | GO:0004750: ribulose-phosphate 3-epimerase activity | 2.12E-04 |
| 22 | GO:0005528: FK506 binding | 2.77E-04 |
| 23 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 3.54E-04 |
| 24 | GO:0030267: glyoxylate reductase (NADP) activity | 3.54E-04 |
| 25 | GO:0004324: ferredoxin-NADP+ reductase activity | 3.54E-04 |
| 26 | GO:0004373: glycogen (starch) synthase activity | 3.54E-04 |
| 27 | GO:0050734: hydroxycinnamoyltransferase activity | 3.54E-04 |
| 28 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.54E-04 |
| 29 | GO:0004550: nucleoside diphosphate kinase activity | 5.10E-04 |
| 30 | GO:0050662: coenzyme binding | 5.92E-04 |
| 31 | GO:0009011: starch synthase activity | 6.78E-04 |
| 32 | GO:0042277: peptide binding | 6.78E-04 |
| 33 | GO:0019199: transmembrane receptor protein kinase activity | 6.78E-04 |
| 34 | GO:0003959: NADPH dehydrogenase activity | 8.59E-04 |
| 35 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 8.59E-04 |
| 36 | GO:2001070: starch binding | 1.05E-03 |
| 37 | GO:0004130: cytochrome-c peroxidase activity | 1.05E-03 |
| 38 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.25E-03 |
| 39 | GO:0004602: glutathione peroxidase activity | 1.25E-03 |
| 40 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.25E-03 |
| 41 | GO:0016491: oxidoreductase activity | 1.32E-03 |
| 42 | GO:0015078: hydrogen ion transmembrane transporter activity | 1.93E-03 |
| 43 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.32E-03 |
| 44 | GO:0044183: protein binding involved in protein folding | 2.98E-03 |
| 45 | GO:0047372: acylglycerol lipase activity | 2.98E-03 |
| 46 | GO:0004089: carbonate dehydratase activity | 3.56E-03 |
| 47 | GO:0031072: heat shock protein binding | 3.56E-03 |
| 48 | GO:0030170: pyridoxal phosphate binding | 5.25E-03 |
| 49 | GO:0003729: mRNA binding | 6.82E-03 |
| 50 | GO:0048038: quinone binding | 8.99E-03 |
| 51 | GO:0051015: actin filament binding | 9.85E-03 |
| 52 | GO:0016788: hydrolase activity, acting on ester bonds | 1.03E-02 |
| 53 | GO:0005200: structural constituent of cytoskeleton | 1.07E-02 |
| 54 | GO:0008237: metallopeptidase activity | 1.07E-02 |
| 55 | GO:0016787: hydrolase activity | 1.18E-02 |
| 56 | GO:0052689: carboxylic ester hydrolase activity | 1.39E-02 |
| 57 | GO:0004222: metalloendopeptidase activity | 1.51E-02 |
| 58 | GO:0004364: glutathione transferase activity | 1.93E-02 |
| 59 | GO:0005198: structural molecule activity | 2.16E-02 |
| 60 | GO:0003777: microtubule motor activity | 2.65E-02 |
| 61 | GO:0003723: RNA binding | 2.89E-02 |
| 62 | GO:0051082: unfolded protein binding | 3.16E-02 |
| 63 | GO:0004252: serine-type endopeptidase activity | 4.00E-02 |
| 64 | GO:0008017: microtubule binding | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.52E-43 |
| 3 | GO:0009570: chloroplast stroma | 1.27E-38 |
| 4 | GO:0009941: chloroplast envelope | 1.01E-34 |
| 5 | GO:0009579: thylakoid | 2.46E-23 |
| 6 | GO:0009534: chloroplast thylakoid | 4.82E-20 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 5.07E-18 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 2.35E-09 |
| 9 | GO:0010319: stromule | 2.21E-08 |
| 10 | GO:0010287: plastoglobule | 7.38E-08 |
| 11 | GO:0005840: ribosome | 1.96E-07 |
| 12 | GO:0031977: thylakoid lumen | 2.02E-07 |
| 13 | GO:0009533: chloroplast stromal thylakoid | 3.66E-05 |
| 14 | GO:0009501: amyloplast | 4.79E-05 |
| 15 | GO:0009295: nucleoid | 5.11E-05 |
| 16 | GO:0000311: plastid large ribosomal subunit | 1.50E-04 |
| 17 | GO:0048046: apoplast | 1.51E-04 |
| 18 | GO:0009508: plastid chromosome | 1.73E-04 |
| 19 | GO:0030093: chloroplast photosystem I | 2.12E-04 |
| 20 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 1.05E-03 |
| 21 | GO:0016020: membrane | 1.55E-03 |
| 22 | GO:0022625: cytosolic large ribosomal subunit | 2.10E-03 |
| 23 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.18E-03 |
| 24 | GO:0042644: chloroplast nucleoid | 2.18E-03 |
| 25 | GO:0045298: tubulin complex | 2.18E-03 |
| 26 | GO:0009706: chloroplast inner membrane | 3.79E-03 |
| 27 | GO:0000312: plastid small ribosomal subunit | 3.86E-03 |
| 28 | GO:0030095: chloroplast photosystem II | 3.86E-03 |
| 29 | GO:0009536: plastid | 5.08E-03 |
| 30 | GO:0015629: actin cytoskeleton | 6.23E-03 |
| 31 | GO:0005871: kinesin complex | 6.99E-03 |
| 32 | GO:0009523: photosystem II | 8.58E-03 |
| 33 | GO:0030529: intracellular ribonucleoprotein complex | 1.17E-02 |
| 34 | GO:0005874: microtubule | 1.21E-02 |
| 35 | GO:0015934: large ribosomal subunit | 1.56E-02 |
| 36 | GO:0005856: cytoskeleton | 2.16E-02 |
| 37 | GO:0022626: cytosolic ribosome | 3.15E-02 |