GO Enrichment Analysis of Co-expressed Genes with
AT3G51800
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990569: UDP-N-acetylglucosamine transmembrane transport | 0.00E+00 |
| 2 | GO:0000495: box H/ACA snoRNA 3'-end processing | 0.00E+00 |
| 3 | GO:0015789: UDP-N-acetylgalactosamine transport | 0.00E+00 |
| 4 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 5 | GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process | 0.00E+00 |
| 6 | GO:0045041: protein import into mitochondrial intermembrane space | 0.00E+00 |
| 7 | GO:1903857: negative regulation of cytokinin dehydrogenase activity | 0.00E+00 |
| 8 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 9 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 10 | GO:1990481: mRNA pseudouridine synthesis | 0.00E+00 |
| 11 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 12 | GO:0006412: translation | 1.14E-107 |
| 13 | GO:0042254: ribosome biogenesis | 6.34E-36 |
| 14 | GO:0000027: ribosomal large subunit assembly | 2.80E-14 |
| 15 | GO:0006364: rRNA processing | 7.78E-08 |
| 16 | GO:0006458: 'de novo' protein folding | 1.11E-07 |
| 17 | GO:0006626: protein targeting to mitochondrion | 1.33E-07 |
| 18 | GO:0048569: post-embryonic animal organ development | 9.87E-06 |
| 19 | GO:0009967: positive regulation of signal transduction | 9.87E-06 |
| 20 | GO:0009955: adaxial/abaxial pattern specification | 1.04E-05 |
| 21 | GO:0042026: protein refolding | 1.04E-05 |
| 22 | GO:0009735: response to cytokinin | 1.59E-05 |
| 23 | GO:0000028: ribosomal small subunit assembly | 2.44E-05 |
| 24 | GO:0061077: chaperone-mediated protein folding | 2.49E-05 |
| 25 | GO:0007005: mitochondrion organization | 3.00E-05 |
| 26 | GO:0002181: cytoplasmic translation | 3.37E-05 |
| 27 | GO:0045039: protein import into mitochondrial inner membrane | 3.37E-05 |
| 28 | GO:0010162: seed dormancy process | 7.93E-05 |
| 29 | GO:0046686: response to cadmium ion | 1.05E-04 |
| 30 | GO:0042274: ribosomal small subunit biogenesis | 1.26E-04 |
| 31 | GO:0006413: translational initiation | 1.58E-04 |
| 32 | GO:0031167: rRNA methylation | 1.94E-04 |
| 33 | GO:0030150: protein import into mitochondrial matrix | 2.83E-04 |
| 34 | GO:0000245: spliceosomal complex assembly | 3.68E-04 |
| 35 | GO:0016444: somatic cell DNA recombination | 3.68E-04 |
| 36 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 4.73E-04 |
| 37 | GO:0031120: snRNA pseudouridine synthesis | 4.73E-04 |
| 38 | GO:0000469: cleavage involved in rRNA processing | 4.73E-04 |
| 39 | GO:0031118: rRNA pseudouridine synthesis | 4.73E-04 |
| 40 | GO:0035266: meristem growth | 4.73E-04 |
| 41 | GO:0030490: maturation of SSU-rRNA | 4.73E-04 |
| 42 | GO:0006434: seryl-tRNA aminoacylation | 4.73E-04 |
| 43 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.73E-04 |
| 44 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.73E-04 |
| 45 | GO:0019877: diaminopimelate biosynthetic process | 4.73E-04 |
| 46 | GO:0006169: adenosine salvage | 4.73E-04 |
| 47 | GO:0006407: rRNA export from nucleus | 4.73E-04 |
| 48 | GO:0008033: tRNA processing | 6.37E-04 |
| 49 | GO:0008283: cell proliferation | 6.61E-04 |
| 50 | GO:0001510: RNA methylation | 7.21E-04 |
| 51 | GO:0080156: mitochondrial mRNA modification | 9.14E-04 |
| 52 | GO:0015786: UDP-glucose transport | 1.02E-03 |
| 53 | GO:0045859: regulation of protein kinase activity | 1.02E-03 |
| 54 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 1.02E-03 |
| 55 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 1.02E-03 |
| 56 | GO:0006414: translational elongation | 1.20E-03 |
| 57 | GO:0006913: nucleocytoplasmic transport | 1.36E-03 |
| 58 | GO:0006954: inflammatory response | 1.66E-03 |
| 59 | GO:1902626: assembly of large subunit precursor of preribosome | 1.66E-03 |
| 60 | GO:0015783: GDP-fucose transport | 1.66E-03 |
| 61 | GO:0010476: gibberellin mediated signaling pathway | 1.66E-03 |
| 62 | GO:0042256: mature ribosome assembly | 1.66E-03 |
| 63 | GO:0009855: determination of bilateral symmetry | 2.41E-03 |
| 64 | GO:0051131: chaperone-mediated protein complex assembly | 2.41E-03 |
| 65 | GO:0032981: mitochondrial respiratory chain complex I assembly | 2.41E-03 |
| 66 | GO:0046513: ceramide biosynthetic process | 2.41E-03 |
| 67 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 2.41E-03 |
| 68 | GO:0033617: mitochondrial respiratory chain complex IV assembly | 2.41E-03 |
| 69 | GO:0070301: cellular response to hydrogen peroxide | 2.41E-03 |
| 70 | GO:0006241: CTP biosynthetic process | 2.41E-03 |
| 71 | GO:0072334: UDP-galactose transmembrane transport | 2.41E-03 |
| 72 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 2.41E-03 |
| 73 | GO:0006165: nucleoside diphosphate phosphorylation | 2.41E-03 |
| 74 | GO:0006228: UTP biosynthetic process | 2.41E-03 |
| 75 | GO:0006164: purine nucleotide biosynthetic process | 2.41E-03 |
| 76 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.78E-03 |
| 77 | GO:0051781: positive regulation of cell division | 3.24E-03 |
| 78 | GO:0006183: GTP biosynthetic process | 3.24E-03 |
| 79 | GO:0042273: ribosomal large subunit biogenesis | 3.24E-03 |
| 80 | GO:0051205: protein insertion into membrane | 3.24E-03 |
| 81 | GO:0006334: nucleosome assembly | 3.37E-03 |
| 82 | GO:0009294: DNA mediated transformation | 4.03E-03 |
| 83 | GO:0040007: growth | 4.03E-03 |
| 84 | GO:0071215: cellular response to abscisic acid stimulus | 4.03E-03 |
| 85 | GO:0006461: protein complex assembly | 4.15E-03 |
| 86 | GO:1902183: regulation of shoot apical meristem development | 4.15E-03 |
| 87 | GO:0044209: AMP salvage | 4.15E-03 |
| 88 | GO:0000741: karyogamy | 5.14E-03 |
| 89 | GO:0000413: protein peptidyl-prolyl isomerization | 5.14E-03 |
| 90 | GO:0000470: maturation of LSU-rRNA | 5.14E-03 |
| 91 | GO:0016554: cytidine to uridine editing | 5.14E-03 |
| 92 | GO:0010197: polar nucleus fusion | 5.54E-03 |
| 93 | GO:0000054: ribosomal subunit export from nucleus | 6.21E-03 |
| 94 | GO:0009648: photoperiodism | 6.21E-03 |
| 95 | GO:0009793: embryo development ending in seed dormancy | 7.32E-03 |
| 96 | GO:0080186: developmental vegetative growth | 7.34E-03 |
| 97 | GO:0009553: embryo sac development | 8.47E-03 |
| 98 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 8.55E-03 |
| 99 | GO:0043562: cellular response to nitrogen levels | 9.82E-03 |
| 100 | GO:0006002: fructose 6-phosphate metabolic process | 9.82E-03 |
| 101 | GO:0000398: mRNA splicing, via spliceosome | 1.06E-02 |
| 102 | GO:0006189: 'de novo' IMP biosynthetic process | 1.12E-02 |
| 103 | GO:0015780: nucleotide-sugar transport | 1.12E-02 |
| 104 | GO:0007338: single fertilization | 1.12E-02 |
| 105 | GO:0048507: meristem development | 1.12E-02 |
| 106 | GO:0000387: spliceosomal snRNP assembly | 1.25E-02 |
| 107 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.25E-02 |
| 108 | GO:0010449: root meristem growth | 1.25E-02 |
| 109 | GO:0010311: lateral root formation | 1.37E-02 |
| 110 | GO:0030422: production of siRNA involved in RNA interference | 1.40E-02 |
| 111 | GO:0006259: DNA metabolic process | 1.40E-02 |
| 112 | GO:0010015: root morphogenesis | 1.55E-02 |
| 113 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.55E-02 |
| 114 | GO:0000724: double-strand break repair via homologous recombination | 1.58E-02 |
| 115 | GO:0006820: anion transport | 1.71E-02 |
| 116 | GO:2000012: regulation of auxin polar transport | 1.87E-02 |
| 117 | GO:0010102: lateral root morphogenesis | 1.87E-02 |
| 118 | GO:0090351: seedling development | 2.21E-02 |
| 119 | GO:0009965: leaf morphogenesis | 2.40E-02 |
| 120 | GO:0006289: nucleotide-excision repair | 2.57E-02 |
| 121 | GO:0010073: meristem maintenance | 2.76E-02 |
| 122 | GO:0015992: proton transport | 2.95E-02 |
| 123 | GO:0015031: protein transport | 3.07E-02 |
| 124 | GO:0009409: response to cold | 3.44E-02 |
| 125 | GO:0010584: pollen exine formation | 3.56E-02 |
| 126 | GO:0016569: covalent chromatin modification | 3.86E-02 |
| 127 | GO:0010501: RNA secondary structure unwinding | 3.98E-02 |
| 128 | GO:0006606: protein import into nucleus | 3.98E-02 |
| 129 | GO:0009651: response to salt stress | 4.00E-02 |
| 130 | GO:0010305: leaf vascular tissue pattern formation | 4.20E-02 |
| 131 | GO:0009960: endosperm development | 4.20E-02 |
| 132 | GO:0009749: response to glucose | 4.65E-02 |
| 133 | GO:0010183: pollen tube guidance | 4.65E-02 |
| 134 | GO:0000302: response to reactive oxygen species | 4.88E-02 |
| 135 | GO:0006635: fatty acid beta-oxidation | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 2 | GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 4 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 5 | GO:0003735: structural constituent of ribosome | 1.33E-131 |
| 6 | GO:0003729: mRNA binding | 3.06E-27 |
| 7 | GO:0019843: rRNA binding | 1.17E-14 |
| 8 | GO:0003723: RNA binding | 1.32E-10 |
| 9 | GO:0003746: translation elongation factor activity | 7.78E-09 |
| 10 | GO:0044183: protein binding involved in protein folding | 5.90E-08 |
| 11 | GO:0030515: snoRNA binding | 2.18E-07 |
| 12 | GO:0005078: MAP-kinase scaffold activity | 9.87E-06 |
| 13 | GO:0000166: nucleotide binding | 2.28E-05 |
| 14 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.01E-05 |
| 15 | GO:0008649: rRNA methyltransferase activity | 3.37E-05 |
| 16 | GO:0001055: RNA polymerase II activity | 6.17E-05 |
| 17 | GO:0008097: 5S rRNA binding | 7.23E-05 |
| 18 | GO:0001054: RNA polymerase I activity | 9.96E-05 |
| 19 | GO:0001056: RNA polymerase III activity | 1.23E-04 |
| 20 | GO:0004407: histone deacetylase activity | 2.83E-04 |
| 21 | GO:0051082: unfolded protein binding | 3.44E-04 |
| 22 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 4.73E-04 |
| 23 | GO:0048037: cofactor binding | 4.73E-04 |
| 24 | GO:0004001: adenosine kinase activity | 4.73E-04 |
| 25 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 4.73E-04 |
| 26 | GO:0042134: rRNA primary transcript binding | 4.73E-04 |
| 27 | GO:0008840: 4-hydroxy-tetrahydrodipicolinate synthase | 4.73E-04 |
| 28 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 4.73E-04 |
| 29 | GO:0004828: serine-tRNA ligase activity | 4.73E-04 |
| 30 | GO:0004679: AMP-activated protein kinase activity | 4.73E-04 |
| 31 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 4.73E-04 |
| 32 | GO:0008135: translation factor activity, RNA binding | 7.21E-04 |
| 33 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 1.02E-03 |
| 34 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 1.02E-03 |
| 35 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 1.02E-03 |
| 36 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.02E-03 |
| 37 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 1.02E-03 |
| 38 | GO:0050291: sphingosine N-acyltransferase activity | 1.02E-03 |
| 39 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.02E-03 |
| 40 | GO:0070361: mitochondrial light strand promoter anti-sense binding | 1.02E-03 |
| 41 | GO:0005507: copper ion binding | 1.07E-03 |
| 42 | GO:0003743: translation initiation factor activity | 1.21E-03 |
| 43 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 1.66E-03 |
| 44 | GO:0005457: GDP-fucose transmembrane transporter activity | 1.66E-03 |
| 45 | GO:0008469: histone-arginine N-methyltransferase activity | 1.66E-03 |
| 46 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 1.66E-03 |
| 47 | GO:0032947: protein complex scaffold | 1.66E-03 |
| 48 | GO:0005460: UDP-glucose transmembrane transporter activity | 2.41E-03 |
| 49 | GO:0004550: nucleoside diphosphate kinase activity | 2.41E-03 |
| 50 | GO:0050897: cobalt ion binding | 2.46E-03 |
| 51 | GO:0070628: proteasome binding | 3.24E-03 |
| 52 | GO:0005459: UDP-galactose transmembrane transporter activity | 4.15E-03 |
| 53 | GO:0004040: amidase activity | 4.15E-03 |
| 54 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 5.14E-03 |
| 55 | GO:0031593: polyubiquitin binding | 5.14E-03 |
| 56 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.60E-03 |
| 57 | GO:0019887: protein kinase regulator activity | 6.21E-03 |
| 58 | GO:0004656: procollagen-proline 4-dioxygenase activity | 6.21E-03 |
| 59 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 7.34E-03 |
| 60 | GO:0003872: 6-phosphofructokinase activity | 7.34E-03 |
| 61 | GO:0015288: porin activity | 8.55E-03 |
| 62 | GO:0008026: ATP-dependent helicase activity | 9.48E-03 |
| 63 | GO:0008308: voltage-gated anion channel activity | 9.82E-03 |
| 64 | GO:0003678: DNA helicase activity | 1.12E-02 |
| 65 | GO:0004004: ATP-dependent RNA helicase activity | 1.17E-02 |
| 66 | GO:0005525: GTP binding | 1.32E-02 |
| 67 | GO:0000049: tRNA binding | 1.71E-02 |
| 68 | GO:0009982: pseudouridine synthase activity | 1.87E-02 |
| 69 | GO:0015266: protein channel activity | 1.87E-02 |
| 70 | GO:0042393: histone binding | 1.89E-02 |
| 71 | GO:0003924: GTPase activity | 2.00E-02 |
| 72 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.49E-02 |
| 73 | GO:0031418: L-ascorbic acid binding | 2.57E-02 |
| 74 | GO:0043130: ubiquitin binding | 2.57E-02 |
| 75 | GO:0051087: chaperone binding | 2.76E-02 |
| 76 | GO:0004176: ATP-dependent peptidase activity | 2.95E-02 |
| 77 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.95E-02 |
| 78 | GO:0008514: organic anion transmembrane transporter activity | 3.56E-02 |
| 79 | GO:0008080: N-acetyltransferase activity | 4.20E-02 |
| 80 | GO:0010181: FMN binding | 4.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 3 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 4 | GO:0005840: ribosome | 5.52E-83 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 6.32E-80 |
| 6 | GO:0022626: cytosolic ribosome | 4.67E-79 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 3.33E-59 |
| 8 | GO:0005730: nucleolus | 3.18E-44 |
| 9 | GO:0005829: cytosol | 3.73E-36 |
| 10 | GO:0005737: cytoplasm | 2.89E-26 |
| 11 | GO:0009506: plasmodesma | 8.51E-22 |
| 12 | GO:0015934: large ribosomal subunit | 6.38E-17 |
| 13 | GO:0005774: vacuolar membrane | 1.17E-14 |
| 14 | GO:0015935: small ribosomal subunit | 6.36E-12 |
| 15 | GO:0005773: vacuole | 1.11E-11 |
| 16 | GO:0016020: membrane | 1.72E-09 |
| 17 | GO:0015030: Cajal body | 1.58E-06 |
| 18 | GO:0005618: cell wall | 3.15E-06 |
| 19 | GO:0032040: small-subunit processome | 4.51E-06 |
| 20 | GO:0031428: box C/D snoRNP complex | 6.09E-06 |
| 21 | GO:0009507: chloroplast | 1.08E-05 |
| 22 | GO:0005736: DNA-directed RNA polymerase I complex | 4.69E-05 |
| 23 | GO:0005666: DNA-directed RNA polymerase III complex | 6.17E-05 |
| 24 | GO:0000418: DNA-directed RNA polymerase IV complex | 7.93E-05 |
| 25 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.23E-04 |
| 26 | GO:0005834: heterotrimeric G-protein complex | 2.72E-04 |
| 27 | GO:0005758: mitochondrial intermembrane space | 2.83E-04 |
| 28 | GO:0005886: plasma membrane | 2.83E-04 |
| 29 | GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex | 4.73E-04 |
| 30 | GO:0030686: 90S preribosome | 4.73E-04 |
| 31 | GO:0005742: mitochondrial outer membrane translocase complex | 7.21E-04 |
| 32 | GO:0005759: mitochondrial matrix | 7.83E-04 |
| 33 | GO:0071010: prespliceosome | 1.02E-03 |
| 34 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.36E-03 |
| 35 | GO:0005743: mitochondrial inner membrane | 1.38E-03 |
| 36 | GO:0005747: mitochondrial respiratory chain complex I | 1.40E-03 |
| 37 | GO:0034719: SMN-Sm protein complex | 1.66E-03 |
| 38 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.66E-03 |
| 39 | GO:0034715: pICln-Sm protein complex | 1.66E-03 |
| 40 | GO:0019013: viral nucleocapsid | 1.77E-03 |
| 41 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.03E-03 |
| 42 | GO:0031429: box H/ACA snoRNP complex | 2.41E-03 |
| 43 | GO:0000419: DNA-directed RNA polymerase V complex | 2.50E-03 |
| 44 | GO:0005682: U5 snRNP | 3.24E-03 |
| 45 | GO:0005687: U4 snRNP | 4.15E-03 |
| 46 | GO:0097526: spliceosomal tri-snRNP complex | 4.15E-03 |
| 47 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 4.38E-03 |
| 48 | GO:0005851: eukaryotic translation initiation factor 2B complex | 5.14E-03 |
| 49 | GO:0000243: commitment complex | 5.14E-03 |
| 50 | GO:0005689: U12-type spliceosomal complex | 6.21E-03 |
| 51 | GO:0016272: prefoldin complex | 6.21E-03 |
| 52 | GO:0016363: nuclear matrix | 6.21E-03 |
| 53 | GO:0031359: integral component of chloroplast outer membrane | 7.34E-03 |
| 54 | GO:0005739: mitochondrion | 8.88E-03 |
| 55 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 9.21E-03 |
| 56 | GO:0046930: pore complex | 9.82E-03 |
| 57 | GO:0005685: U1 snRNP | 1.12E-02 |
| 58 | GO:0071011: precatalytic spliceosome | 1.25E-02 |
| 59 | GO:0016604: nuclear body | 1.25E-02 |
| 60 | GO:0005686: U2 snRNP | 1.40E-02 |
| 61 | GO:0005622: intracellular | 1.53E-02 |
| 62 | GO:0071013: catalytic step 2 spliceosome | 1.55E-02 |
| 63 | GO:0048471: perinuclear region of cytoplasm | 1.55E-02 |
| 64 | GO:0009536: plastid | 2.87E-02 |
| 65 | GO:0005741: mitochondrial outer membrane | 2.95E-02 |
| 66 | GO:0005681: spliceosomal complex | 3.41E-02 |