Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G51610

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034053: modulation by symbiont of host defense-related programmed cell death0.00E+00
2GO:0006720: isoprenoid metabolic process0.00E+00
3GO:0048870: cell motility0.00E+00
4GO:0018293: protein-FAD linkage0.00E+00
5GO:0034553: mitochondrial respiratory chain complex II assembly0.00E+00
6GO:0032780: negative regulation of ATPase activity0.00E+00
7GO:0051776: detection of redox state0.00E+00
8GO:0046292: formaldehyde metabolic process0.00E+00
9GO:0045747: positive regulation of Notch signaling pathway0.00E+00
10GO:0046460: neutral lipid biosynthetic process0.00E+00
11GO:0046294: formaldehyde catabolic process0.00E+00
12GO:0032928: regulation of superoxide anion generation0.00E+00
13GO:1990592: protein K69-linked ufmylation0.00E+00
14GO:0006069: ethanol oxidation0.00E+00
15GO:0036172: thiamine salvage0.00E+00
16GO:1904215: regulation of protein import into chloroplast stroma0.00E+00
17GO:0009236: cobalamin biosynthetic process0.00E+00
18GO:0006120: mitochondrial electron transport, NADH to ubiquinone3.87E-08
19GO:0006555: methionine metabolic process2.73E-06
20GO:0019509: L-methionine salvage from methylthioadenosine4.72E-06
21GO:0055114: oxidation-reduction process1.10E-05
22GO:0009229: thiamine diphosphate biosynthetic process1.18E-04
23GO:0033365: protein localization to organelle1.70E-04
24GO:0009117: nucleotide metabolic process1.70E-04
25GO:0009228: thiamine biosynthetic process1.70E-04
26GO:0009853: photorespiration2.11E-04
27GO:0006099: tricarboxylic acid cycle2.27E-04
28GO:0080065: 4-alpha-methyl-delta7-sterol oxidation3.47E-04
29GO:0019354: siroheme biosynthetic process3.47E-04
30GO:0006567: threonine catabolic process3.47E-04
31GO:0016487: farnesol metabolic process3.47E-04
32GO:0016031: tRNA import into mitochondrion3.47E-04
33GO:0009240: isopentenyl diphosphate biosynthetic process3.47E-04
34GO:0043407: negative regulation of MAP kinase activity3.47E-04
35GO:0006996: organelle organization7.56E-04
36GO:0050992: dimethylallyl diphosphate biosynthetic process7.56E-04
37GO:0016122: xanthophyll metabolic process7.56E-04
38GO:0007163: establishment or maintenance of cell polarity7.56E-04
39GO:1902000: homogentisate catabolic process7.56E-04
40GO:0006432: phenylalanyl-tRNA aminoacylation7.56E-04
41GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation7.56E-04
42GO:2000071: regulation of defense response by callose deposition7.56E-04
43GO:0051252: regulation of RNA metabolic process7.56E-04
44GO:0019441: tryptophan catabolic process to kynurenine7.56E-04
45GO:0006760: folic acid-containing compound metabolic process1.22E-03
46GO:0010351: lithium ion transport1.22E-03
47GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation1.22E-03
48GO:0009072: aromatic amino acid family metabolic process1.22E-03
49GO:0034051: negative regulation of plant-type hypersensitive response1.22E-03
50GO:0015940: pantothenate biosynthetic process1.22E-03
51GO:0071492: cellular response to UV-A1.22E-03
52GO:0034599: cellular response to oxidative stress1.62E-03
53GO:0006572: tyrosine catabolic process1.76E-03
54GO:0006487: protein N-linked glycosylation1.76E-03
55GO:0006107: oxaloacetate metabolic process1.76E-03
56GO:0009647: skotomorphogenesis1.76E-03
57GO:0009399: nitrogen fixation1.76E-03
58GO:1901332: negative regulation of lateral root development1.76E-03
59GO:0009963: positive regulation of flavonoid biosynthetic process1.76E-03
60GO:0006516: glycoprotein catabolic process1.76E-03
61GO:0006542: glutamine biosynthetic process2.37E-03
62GO:0070534: protein K63-linked ubiquitination2.37E-03
63GO:0010109: regulation of photosynthesis2.37E-03
64GO:0006545: glycine biosynthetic process2.37E-03
65GO:0071486: cellular response to high light intensity2.37E-03
66GO:0009765: photosynthesis, light harvesting2.37E-03
67GO:0006221: pyrimidine nucleotide biosynthetic process2.37E-03
68GO:0009649: entrainment of circadian clock2.37E-03
69GO:0034613: cellular protein localization2.37E-03
70GO:0018344: protein geranylgeranylation3.03E-03
71GO:0030041: actin filament polymerization3.03E-03
72GO:0098719: sodium ion import across plasma membrane3.03E-03
73GO:0010117: photoprotection3.03E-03
74GO:0046283: anthocyanin-containing compound metabolic process3.03E-03
75GO:0015991: ATP hydrolysis coupled proton transport3.24E-03
76GO:0006662: glycerol ether metabolic process3.49E-03
77GO:0006121: mitochondrial electron transport, succinate to ubiquinone3.74E-03
78GO:0006301: postreplication repair3.74E-03
79GO:0016070: RNA metabolic process3.74E-03
80GO:0031053: primary miRNA processing3.74E-03
81GO:0006796: phosphate-containing compound metabolic process3.74E-03
82GO:0007035: vacuolar acidification3.74E-03
83GO:0015031: protein transport4.36E-03
84GO:1901001: negative regulation of response to salt stress4.50E-03
85GO:0034389: lipid particle organization4.50E-03
86GO:0016569: covalent chromatin modification4.51E-03
87GO:0010090: trichome morphogenesis4.91E-03
88GO:0050790: regulation of catalytic activity5.32E-03
89GO:0009396: folic acid-containing compound biosynthetic process5.32E-03
90GO:0022904: respiratory electron transport chain5.32E-03
91GO:0045010: actin nucleation6.17E-03
92GO:0045292: mRNA cis splicing, via spliceosome6.17E-03
93GO:0009787: regulation of abscisic acid-activated signaling pathway6.17E-03
94GO:0000028: ribosomal small subunit assembly6.17E-03
95GO:0016126: sterol biosynthetic process6.23E-03
96GO:0010099: regulation of photomorphogenesis7.08E-03
97GO:0022900: electron transport chain7.08E-03
98GO:0045454: cell redox homeostasis7.20E-03
99GO:0000902: cell morphogenesis8.04E-03
100GO:0098656: anion transmembrane transport8.04E-03
101GO:0046685: response to arsenic-containing substance8.04E-03
102GO:0019432: triglyceride biosynthetic process8.04E-03
103GO:0006754: ATP biosynthetic process8.04E-03
104GO:0008219: cell death8.14E-03
105GO:0051453: regulation of intracellular pH9.03E-03
106GO:0035999: tetrahydrofolate interconversion9.03E-03
107GO:1900865: chloroplast RNA modification9.03E-03
108GO:0010043: response to zinc ion9.43E-03
109GO:0009688: abscisic acid biosynthetic process1.01E-02
110GO:0009641: shade avoidance1.01E-02
111GO:0010015: root morphogenesis1.12E-02
112GO:0009682: induced systemic resistance1.12E-02
113GO:0043085: positive regulation of catalytic activity1.12E-02
114GO:0045037: protein import into chloroplast stroma1.23E-02
115GO:0006807: nitrogen compound metabolic process1.34E-02
116GO:0006108: malate metabolic process1.34E-02
117GO:0009651: response to salt stress1.42E-02
118GO:0048440: carpel development1.46E-02
119GO:0002237: response to molecule of bacterial origin1.46E-02
120GO:0010039: response to iron ion1.59E-02
121GO:0006071: glycerol metabolic process1.71E-02
122GO:0000162: tryptophan biosynthetic process1.71E-02
123GO:0009585: red, far-red light phototransduction1.81E-02
124GO:2000377: regulation of reactive oxygen species metabolic process1.85E-02
125GO:0006970: response to osmotic stress1.87E-02
126GO:0010224: response to UV-B1.87E-02
127GO:0051302: regulation of cell division1.98E-02
128GO:0008299: isoprenoid biosynthetic process1.98E-02
129GO:0015992: proton transport2.12E-02
130GO:0010431: seed maturation2.12E-02
131GO:0019915: lipid storage2.12E-02
132GO:0061077: chaperone-mediated protein folding2.12E-02
133GO:0007005: mitochondrion organization2.26E-02
134GO:0016226: iron-sulfur cluster assembly2.26E-02
135GO:2000022: regulation of jasmonic acid mediated signaling pathway2.26E-02
136GO:0006979: response to oxidative stress2.38E-02
137GO:0006012: galactose metabolic process2.40E-02
138GO:0035556: intracellular signal transduction2.54E-02
139GO:0010118: stomatal movement2.85E-02
140GO:0080022: primary root development2.85E-02
141GO:0006520: cellular amino acid metabolic process3.01E-02
142GO:0006814: sodium ion transport3.17E-02
143GO:0015986: ATP synthesis coupled proton transport3.17E-02
144GO:0008654: phospholipid biosynthetic process3.33E-02
145GO:0009851: auxin biosynthetic process3.33E-02
146GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.50E-02
147GO:0002229: defense response to oomycetes3.50E-02
148GO:0010193: response to ozone3.50E-02
149GO:0030163: protein catabolic process3.84E-02
150GO:0006914: autophagy4.01E-02
151GO:0010286: heat acclimation4.19E-02
152GO:0071805: potassium ion transmembrane transport4.19E-02
153GO:0042128: nitrate assimilation4.91E-02
154GO:0006906: vesicle fusion4.91E-02
RankGO TermAdjusted P value
1GO:0042030: ATPase inhibitor activity0.00E+00
2GO:0004417: hydroxyethylthiazole kinase activity0.00E+00
3GO:0052670: geraniol kinase activity0.00E+00
4GO:0052668: farnesol kinase activity0.00E+00
5GO:0080007: S-nitrosoglutathione reductase activity0.00E+00
6GO:0043530: adenosine 5'-monophosphoramidase activity0.00E+00
7GO:0008902: hydroxymethylpyrimidine kinase activity0.00E+00
8GO:0050152: omega-amidase activity0.00E+00
9GO:0052671: geranylgeraniol kinase activity0.00E+00
10GO:0018738: S-formylglutathione hydrolase activity0.00E+00
11GO:0004334: fumarylacetoacetase activity0.00E+00
12GO:0051266: sirohydrochlorin ferrochelatase activity0.00E+00
13GO:0008972: phosphomethylpyrimidine kinase activity0.00E+00
14GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity0.00E+00
15GO:0047710: bis(5'-adenosyl)-triphosphatase activity0.00E+00
16GO:0052669: CTP:2-trans,-6-trans-farnesol kinase activity0.00E+00
17GO:0004789: thiamine-phosphate diphosphorylase activity0.00E+00
18GO:0016852: sirohydrochlorin cobaltochelatase activity0.00E+00
19GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity4.49E-08
20GO:0008137: NADH dehydrogenase (ubiquinone) activity4.23E-05
21GO:0000254: C-4 methylsterol oxidase activity4.24E-05
22GO:0033549: MAP kinase phosphatase activity3.47E-04
23GO:0033984: indole-3-glycerol-phosphate lyase activity3.47E-04
24GO:0004560: alpha-L-fucosidase activity3.47E-04
25GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity3.47E-04
26GO:0004793: threonine aldolase activity3.47E-04
27GO:0004452: isopentenyl-diphosphate delta-isomerase activity3.47E-04
28GO:0019707: protein-cysteine S-acyltransferase activity3.47E-04
29GO:0008732: L-allo-threonine aldolase activity3.47E-04
30GO:0030611: arsenate reductase activity3.47E-04
31GO:0035064: methylated histone binding3.76E-04
32GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor6.06E-04
33GO:0047617: acyl-CoA hydrolase activity6.53E-04
34GO:0008428: ribonuclease inhibitor activity7.56E-04
35GO:0004061: arylformamidase activity7.56E-04
36GO:0004826: phenylalanine-tRNA ligase activity7.56E-04
37GO:0004046: aminoacylase activity7.56E-04
38GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity7.56E-04
39GO:0004129: cytochrome-c oxidase activity8.76E-04
40GO:0015266: protein channel activity1.13E-03
41GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.22E-03
42GO:0004848: ureidoglycolate hydrolase activity1.22E-03
43GO:0032403: protein complex binding1.22E-03
44GO:0004663: Rab geranylgeranyltransferase activity1.22E-03
45GO:0004725: protein tyrosine phosphatase activity1.59E-03
46GO:0000339: RNA cap binding1.76E-03
47GO:0047627: adenylylsulfatase activity1.76E-03
48GO:0051536: iron-sulfur cluster binding1.76E-03
49GO:0005528: FK506 binding1.76E-03
50GO:0035529: NADH pyrophosphatase activity1.76E-03
51GO:0016656: monodehydroascorbate reductase (NADH) activity1.76E-03
52GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity1.76E-03
53GO:0016787: hydrolase activity1.81E-03
54GO:0004834: tryptophan synthase activity2.37E-03
55GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.37E-03
56GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances2.37E-03
57GO:0004576: oligosaccharyl transferase activity2.37E-03
58GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor2.37E-03
59GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.58E-03
60GO:0047134: protein-disulfide reductase activity3.00E-03
61GO:0004356: glutamate-ammonia ligase activity3.03E-03
62GO:0030151: molybdenum ion binding3.03E-03
63GO:0008177: succinate dehydrogenase (ubiquinone) activity3.03E-03
64GO:0008948: oxaloacetate decarboxylase activity3.03E-03
65GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity3.03E-03
66GO:0016651: oxidoreductase activity, acting on NAD(P)H3.03E-03
67GO:0005496: steroid binding3.03E-03
68GO:0046933: proton-transporting ATP synthase activity, rotational mechanism3.49E-03
69GO:0004605: phosphatidate cytidylyltransferase activity3.74E-03
70GO:0015081: sodium ion transmembrane transporter activity3.74E-03
71GO:0004791: thioredoxin-disulfide reductase activity3.75E-03
72GO:0016853: isomerase activity3.75E-03
73GO:0051920: peroxiredoxin activity4.50E-03
74GO:0070300: phosphatidic acid binding4.50E-03
75GO:0004144: diacylglycerol O-acyltransferase activity4.50E-03
76GO:0004427: inorganic diphosphatase activity5.32E-03
77GO:0008121: ubiquinol-cytochrome-c reductase activity5.32E-03
78GO:0008143: poly(A) binding5.32E-03
79GO:0008320: protein transmembrane transporter activity5.32E-03
80GO:0016209: antioxidant activity6.17E-03
81GO:0004034: aldose 1-epimerase activity6.17E-03
82GO:0015078: hydrogen ion transmembrane transporter activity7.08E-03
83GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity8.04E-03
84GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors8.04E-03
85GO:0071949: FAD binding8.04E-03
86GO:0008138: protein tyrosine/serine/threonine phosphatase activity8.04E-03
87GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity8.14E-03
88GO:0001055: RNA polymerase II activity9.03E-03
89GO:0045309: protein phosphorylated amino acid binding9.03E-03
90GO:0003824: catalytic activity9.53E-03
91GO:0008047: enzyme activator activity1.01E-02
92GO:0001054: RNA polymerase I activity1.12E-02
93GO:0015386: potassium:proton antiporter activity1.12E-02
94GO:0019904: protein domain specific binding1.12E-02
95GO:0046961: proton-transporting ATPase activity, rotational mechanism1.12E-02
96GO:0008794: arsenate reductase (glutaredoxin) activity1.12E-02
97GO:0051539: 4 iron, 4 sulfur cluster binding1.18E-02
98GO:0001056: RNA polymerase III activity1.23E-02
99GO:0000049: tRNA binding1.23E-02
100GO:0042802: identical protein binding1.33E-02
101GO:0004089: carbonate dehydratase activity1.34E-02
102GO:0004022: alcohol dehydrogenase (NAD) activity1.34E-02
103GO:0005315: inorganic phosphate transmembrane transporter activity1.34E-02
104GO:0016491: oxidoreductase activity1.36E-02
105GO:0043621: protein self-association1.45E-02
106GO:0016788: hydrolase activity, acting on ester bonds1.75E-02
107GO:0003714: transcription corepressor activity1.85E-02
108GO:0005506: iron ion binding2.29E-02
109GO:0008514: organic anion transmembrane transporter activity2.55E-02
110GO:0015035: protein disulfide oxidoreductase activity2.65E-02
111GO:0004527: exonuclease activity3.01E-02
112GO:0048038: quinone binding3.50E-02
113GO:0004197: cysteine-type endopeptidase activity3.67E-02
114GO:0015385: sodium:proton antiporter activity3.84E-02
115GO:0046872: metal ion binding3.90E-02
116GO:0005515: protein binding4.24E-02
117GO:0016168: chlorophyll binding4.73E-02
118GO:0008375: acetylglucosaminyltransferase activity4.91E-02
RankGO TermAdjusted P value
1GO:0016469: proton-transporting two-sector ATPase complex0.00E+00
2GO:0005747: mitochondrial respiratory chain complex I1.20E-15
3GO:0045273: respiratory chain complex II1.14E-05
4GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)1.14E-05
5GO:0009507: chloroplast4.02E-05
6GO:0005739: mitochondrion1.33E-04
7GO:0045271: respiratory chain complex I1.73E-04
8GO:0000152: nuclear ubiquitin ligase complex3.47E-04
9GO:0005845: mRNA cap binding complex3.47E-04
10GO:0005846: nuclear cap binding complex7.56E-04
11GO:0005764: lysosome1.27E-03
12GO:0005750: mitochondrial respiratory chain complex III1.27E-03
13GO:0005829: cytosol1.38E-03
14GO:0005753: mitochondrial proton-transporting ATP synthase complex1.43E-03
15GO:0005968: Rab-protein geranylgeranyltransferase complex1.76E-03
16GO:0005758: mitochondrial intermembrane space1.76E-03
17GO:0016471: vacuolar proton-transporting V-type ATPase complex2.37E-03
18GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)2.37E-03
19GO:0009527: plastid outer membrane2.37E-03
20GO:0031372: UBC13-MMS2 complex2.37E-03
21GO:0009517: PSII associated light-harvesting complex II2.37E-03
22GO:0033179: proton-transporting V-type ATPase, V0 domain2.37E-03
23GO:0005744: mitochondrial inner membrane presequence translocase complex2.77E-03
24GO:0031966: mitochondrial membrane2.83E-03
25GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain3.03E-03
26GO:0008250: oligosaccharyltransferase complex3.03E-03
27GO:0005783: endoplasmic reticulum3.15E-03
28GO:0005773: vacuole3.28E-03
29GO:0032588: trans-Golgi network membrane3.74E-03
30GO:0031209: SCAR complex3.74E-03
31GO:0005737: cytoplasm4.44E-03
32GO:0009840: chloroplastic endopeptidase Clp complex4.50E-03
33GO:0032580: Golgi cisterna membrane5.22E-03
34GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane5.32E-03
35GO:0031969: chloroplast membrane5.47E-03
36GO:0009941: chloroplast envelope5.60E-03
37GO:0000421: autophagosome membrane6.17E-03
38GO:0005811: lipid particle7.08E-03
39GO:0005763: mitochondrial small ribosomal subunit8.04E-03
40GO:0005736: DNA-directed RNA polymerase I complex8.04E-03
41GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)8.04E-03
42GO:0031901: early endosome membrane8.04E-03
43GO:0005759: mitochondrial matrix8.67E-03
44GO:0005777: peroxisome8.86E-03
45GO:0005666: DNA-directed RNA polymerase III complex9.03E-03
46GO:0016604: nuclear body9.03E-03
47GO:0005765: lysosomal membrane1.12E-02
48GO:0005665: DNA-directed RNA polymerase II, core complex1.23E-02
49GO:0009570: chloroplast stroma1.36E-02
50GO:0000419: DNA-directed RNA polymerase V complex1.71E-02
51GO:0005789: endoplasmic reticulum membrane1.80E-02
52GO:0009532: plastid stroma2.12E-02
53GO:0016607: nuclear speck2.21E-02
54GO:0031410: cytoplasmic vesicle2.26E-02
55GO:0016020: membrane2.84E-02
56GO:0009543: chloroplast thylakoid lumen3.22E-02
57GO:0009536: plastid3.30E-02
58GO:0009523: photosystem II3.33E-02
59GO:0071944: cell periphery3.84E-02
60GO:0005778: peroxisomal membrane4.19E-02
61GO:0005615: extracellular space4.95E-02
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Gene type



Gene DE type