GO Enrichment Analysis of Co-expressed Genes with
AT3G51240
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 2 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 3 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:0018298: protein-chromophore linkage | 4.06E-10 |
| 6 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.73E-09 |
| 7 | GO:0009769: photosynthesis, light harvesting in photosystem II | 9.28E-09 |
| 8 | GO:0009645: response to low light intensity stimulus | 9.28E-09 |
| 9 | GO:0010207: photosystem II assembly | 1.62E-07 |
| 10 | GO:0009644: response to high light intensity | 1.95E-07 |
| 11 | GO:0015979: photosynthesis | 3.76E-07 |
| 12 | GO:0009269: response to desiccation | 4.33E-07 |
| 13 | GO:0010196: nonphotochemical quenching | 3.78E-06 |
| 14 | GO:0010218: response to far red light | 5.77E-06 |
| 15 | GO:0006098: pentose-phosphate shunt | 8.46E-06 |
| 16 | GO:0010206: photosystem II repair | 8.46E-06 |
| 17 | GO:0010114: response to red light | 1.13E-05 |
| 18 | GO:0005983: starch catabolic process | 1.85E-05 |
| 19 | GO:0006094: gluconeogenesis | 2.17E-05 |
| 20 | GO:0051775: response to redox state | 2.19E-05 |
| 21 | GO:0006729: tetrahydrobiopterin biosynthetic process | 5.64E-05 |
| 22 | GO:0035304: regulation of protein dephosphorylation | 5.64E-05 |
| 23 | GO:0009629: response to gravity | 5.64E-05 |
| 24 | GO:0090391: granum assembly | 9.94E-05 |
| 25 | GO:0071484: cellular response to light intensity | 1.49E-04 |
| 26 | GO:0006107: oxaloacetate metabolic process | 1.49E-04 |
| 27 | GO:0006734: NADH metabolic process | 2.04E-04 |
| 28 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.04E-04 |
| 29 | GO:0009765: photosynthesis, light harvesting | 2.04E-04 |
| 30 | GO:0030104: water homeostasis | 2.04E-04 |
| 31 | GO:0006546: glycine catabolic process | 2.04E-04 |
| 32 | GO:0006021: inositol biosynthetic process | 2.04E-04 |
| 33 | GO:0010236: plastoquinone biosynthetic process | 2.62E-04 |
| 34 | GO:0009637: response to blue light | 2.70E-04 |
| 35 | GO:0050665: hydrogen peroxide biosynthetic process | 3.24E-04 |
| 36 | GO:0042549: photosystem II stabilization | 3.24E-04 |
| 37 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 3.24E-04 |
| 38 | GO:0010189: vitamin E biosynthetic process | 3.89E-04 |
| 39 | GO:0009854: oxidative photosynthetic carbon pathway | 3.89E-04 |
| 40 | GO:0046686: response to cadmium ion | 4.49E-04 |
| 41 | GO:1900057: positive regulation of leaf senescence | 4.56E-04 |
| 42 | GO:0031540: regulation of anthocyanin biosynthetic process | 5.25E-04 |
| 43 | GO:0006096: glycolytic process | 5.49E-04 |
| 44 | GO:0071482: cellular response to light stimulus | 5.98E-04 |
| 45 | GO:0090333: regulation of stomatal closure | 6.71E-04 |
| 46 | GO:0009416: response to light stimulus | 6.73E-04 |
| 47 | GO:0010205: photoinhibition | 7.48E-04 |
| 48 | GO:0009793: embryo development ending in seed dormancy | 8.18E-04 |
| 49 | GO:0009773: photosynthetic electron transport in photosystem I | 9.07E-04 |
| 50 | GO:0019684: photosynthesis, light reaction | 9.07E-04 |
| 51 | GO:0009073: aromatic amino acid family biosynthetic process | 9.07E-04 |
| 52 | GO:0006108: malate metabolic process | 1.07E-03 |
| 53 | GO:0009658: chloroplast organization | 1.67E-03 |
| 54 | GO:0019748: secondary metabolic process | 1.73E-03 |
| 55 | GO:0071215: cellular response to abscisic acid stimulus | 1.83E-03 |
| 56 | GO:0009733: response to auxin | 1.86E-03 |
| 57 | GO:0009409: response to cold | 2.35E-03 |
| 58 | GO:0008654: phospholipid biosynthetic process | 2.49E-03 |
| 59 | GO:0009791: post-embryonic development | 2.49E-03 |
| 60 | GO:0071554: cell wall organization or biogenesis | 2.61E-03 |
| 61 | GO:0051607: defense response to virus | 3.22E-03 |
| 62 | GO:0010027: thylakoid membrane organization | 3.34E-03 |
| 63 | GO:0009813: flavonoid biosynthetic process | 4.14E-03 |
| 64 | GO:0006099: tricarboxylic acid cycle | 4.85E-03 |
| 65 | GO:0042542: response to hydrogen peroxide | 5.45E-03 |
| 66 | GO:0009926: auxin polar transport | 5.60E-03 |
| 67 | GO:0010224: response to UV-B | 7.05E-03 |
| 68 | GO:0006414: translational elongation | 7.95E-03 |
| 69 | GO:0042742: defense response to bacterium | 1.08E-02 |
| 70 | GO:0009845: seed germination | 1.09E-02 |
| 71 | GO:0016036: cellular response to phosphate starvation | 1.23E-02 |
| 72 | GO:0006470: protein dephosphorylation | 1.42E-02 |
| 73 | GO:0080167: response to karrikin | 2.05E-02 |
| 74 | GO:0032259: methylation | 2.62E-02 |
| 75 | GO:0006281: DNA repair | 2.71E-02 |
| 76 | GO:0009408: response to heat | 2.71E-02 |
| 77 | GO:0009753: response to jasmonic acid | 2.85E-02 |
| 78 | GO:0009734: auxin-activated signaling pathway | 3.46E-02 |
| 79 | GO:0009908: flower development | 3.79E-02 |
| 80 | GO:0009735: response to cytokinin | 3.82E-02 |
| 81 | GO:0009611: response to wounding | 4.14E-02 |
| 82 | GO:0045893: positive regulation of transcription, DNA-templated | 4.49E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 3 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 4 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 5 | GO:0031409: pigment binding | 1.06E-09 |
| 6 | GO:0016168: chlorophyll binding | 3.22E-08 |
| 7 | GO:0004332: fructose-bisphosphate aldolase activity | 1.84E-06 |
| 8 | GO:0008746: NAD(P)+ transhydrogenase activity | 2.19E-05 |
| 9 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 2.19E-05 |
| 10 | GO:0050308: sugar-phosphatase activity | 2.19E-05 |
| 11 | GO:0010242: oxygen evolving activity | 2.19E-05 |
| 12 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.19E-05 |
| 13 | GO:0019203: carbohydrate phosphatase activity | 2.19E-05 |
| 14 | GO:0004512: inositol-3-phosphate synthase activity | 5.64E-05 |
| 15 | GO:0003913: DNA photolyase activity | 9.94E-05 |
| 16 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.49E-04 |
| 17 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.49E-04 |
| 18 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.49E-04 |
| 19 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.49E-04 |
| 20 | GO:0008891: glycolate oxidase activity | 2.04E-04 |
| 21 | GO:0003746: translation elongation factor activity | 2.70E-04 |
| 22 | GO:0016615: malate dehydrogenase activity | 3.24E-04 |
| 23 | GO:2001070: starch binding | 3.24E-04 |
| 24 | GO:0030060: L-malate dehydrogenase activity | 3.89E-04 |
| 25 | GO:0009881: photoreceptor activity | 4.56E-04 |
| 26 | GO:0008135: translation factor activity, RNA binding | 5.98E-04 |
| 27 | GO:0071949: FAD binding | 6.71E-04 |
| 28 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 6.71E-04 |
| 29 | GO:0031072: heat shock protein binding | 1.07E-03 |
| 30 | GO:0008266: poly(U) RNA binding | 1.16E-03 |
| 31 | GO:0042802: identical protein binding | 1.38E-03 |
| 32 | GO:0003954: NADH dehydrogenase activity | 1.43E-03 |
| 33 | GO:0003756: protein disulfide isomerase activity | 1.94E-03 |
| 34 | GO:0010181: FMN binding | 2.38E-03 |
| 35 | GO:0016413: O-acetyltransferase activity | 3.22E-03 |
| 36 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 3.87E-03 |
| 37 | GO:0004185: serine-type carboxypeptidase activity | 5.60E-03 |
| 38 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 7.90E-03 |
| 39 | GO:0051082: unfolded protein binding | 8.79E-03 |
| 40 | GO:0016491: oxidoreductase activity | 1.43E-02 |
| 41 | GO:0003743: translation initiation factor activity | 1.44E-02 |
| 42 | GO:0005515: protein binding | 1.69E-02 |
| 43 | GO:0046872: metal ion binding | 1.69E-02 |
| 44 | GO:0008168: methyltransferase activity | 1.71E-02 |
| 45 | GO:0000287: magnesium ion binding | 1.74E-02 |
| 46 | GO:0004497: monooxygenase activity | 2.05E-02 |
| 47 | GO:0003924: GTPase activity | 2.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009579: thylakoid | 8.13E-16 |
| 2 | GO:0009507: chloroplast | 4.41E-15 |
| 3 | GO:0009534: chloroplast thylakoid | 5.43E-14 |
| 4 | GO:0010287: plastoglobule | 1.90E-12 |
| 5 | GO:0009941: chloroplast envelope | 6.41E-11 |
| 6 | GO:0009570: chloroplast stroma | 3.72E-10 |
| 7 | GO:0009517: PSII associated light-harvesting complex II | 6.84E-10 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 1.17E-09 |
| 9 | GO:0009522: photosystem I | 8.53E-09 |
| 10 | GO:0030076: light-harvesting complex | 2.02E-07 |
| 11 | GO:0009523: photosystem II | 1.40E-06 |
| 12 | GO:0009783: photosystem II antenna complex | 2.19E-05 |
| 13 | GO:0009515: granal stacked thylakoid | 2.19E-05 |
| 14 | GO:0030095: chloroplast photosystem II | 2.53E-05 |
| 15 | GO:0048046: apoplast | 3.78E-05 |
| 16 | GO:0043036: starch grain | 5.64E-05 |
| 17 | GO:0031304: intrinsic component of mitochondrial inner membrane | 5.64E-05 |
| 18 | GO:0005960: glycine cleavage complex | 1.49E-04 |
| 19 | GO:0031977: thylakoid lumen | 3.21E-04 |
| 20 | GO:0008180: COP9 signalosome | 6.71E-04 |
| 21 | GO:0009543: chloroplast thylakoid lumen | 8.13E-04 |
| 22 | GO:0009654: photosystem II oxygen evolving complex | 1.53E-03 |
| 23 | GO:0019898: extrinsic component of membrane | 2.49E-03 |
| 24 | GO:0019005: SCF ubiquitin ligase complex | 4.00E-03 |
| 25 | GO:0022626: cytosolic ribosome | 5.11E-03 |
| 26 | GO:0005777: peroxisome | 6.12E-03 |
| 27 | GO:0000502: proteasome complex | 6.88E-03 |
| 28 | GO:0009706: chloroplast inner membrane | 8.79E-03 |
| 29 | GO:0005759: mitochondrial matrix | 1.21E-02 |
| 30 | GO:0009705: plant-type vacuole membrane | 1.29E-02 |
| 31 | GO:0016021: integral component of membrane | 1.71E-02 |