co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G50970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904526: regulation of microtubule binding	0.00E+00
2	GO:0007141: male meiosis I	0.00E+00
3	GO:0009667: plastid inner membrane organization	0.00E+00
4	GO:0009737: response to abscisic acid	2.55E-10
5	GO:0009409: response to cold	1.44E-08
6	GO:0009631: cold acclimation	6.61E-08
7	GO:0009873: ethylene-activated signaling pathway	3.08E-07
8	GO:0042335: cuticle development	4.95E-06
9	GO:0006970: response to osmotic stress	3.25E-05
10	GO:0009269: response to desiccation	6.62E-05
11	GO:0006633: fatty acid biosynthetic process	7.32E-05
12	GO:0035435: phosphate ion transmembrane transport	7.36E-05
13	GO:0009611: response to wounding	8.78E-05
14	GO:0009414: response to water deprivation	1.02E-04
15	GO:0009415: response to water	1.73E-04
16	GO:2000070: regulation of response to water deprivation	1.73E-04
17	GO:0051180: vitamin transport	2.06E-04
18	GO:0030974: thiamine pyrophosphate transport	2.06E-04
19	GO:0015812: gamma-aminobutyric acid transport	2.06E-04
20	GO:0080051: cutin transport	2.06E-04
21	GO:0033481: galacturonate biosynthetic process	2.06E-04
22	GO:0034472: snRNA 3'-end processing	2.06E-04
23	GO:0009609: response to symbiotic bacterium	2.06E-04
24	GO:0010286: heat acclimation	2.68E-04
25	GO:0010200: response to chitin	3.53E-04
26	GO:0010015: root morphogenesis	4.23E-04
27	GO:0000038: very long-chain fatty acid metabolic process	4.23E-04
28	GO:1901679: nucleotide transmembrane transport	4.62E-04
29	GO:0015709: thiosulfate transport	4.62E-04
30	GO:0071422: succinate transmembrane transport	4.62E-04
31	GO:0031407: oxylipin metabolic process	4.62E-04
32	GO:0010289: homogalacturonan biosynthetic process	4.62E-04
33	GO:0015908: fatty acid transport	4.62E-04
34	GO:0015893: drug transport	4.62E-04
35	GO:0050826: response to freezing	5.50E-04
36	GO:0050832: defense response to fungus	5.76E-04
37	GO:0007623: circadian rhythm	6.45E-04
38	GO:0010150: leaf senescence	6.45E-04
39	GO:0006839: mitochondrial transport	7.07E-04
40	GO:0080168: abscisic acid transport	7.52E-04
41	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	7.52E-04
42	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	7.52E-04
43	GO:0046168: glycerol-3-phosphate catabolic process	7.52E-04
44	GO:0080121: AMP transport	7.52E-04
45	GO:0010025: wax biosynthetic process	7.70E-04
46	GO:0009644: response to high light intensity	9.09E-04
47	GO:0009695: jasmonic acid biosynthetic process	9.35E-04
48	GO:0010031: circumnutation	1.07E-03
49	GO:0009413: response to flooding	1.07E-03
50	GO:0051259: protein oligomerization	1.07E-03
51	GO:0010371: regulation of gibberellin biosynthetic process	1.07E-03
52	GO:0015729: oxaloacetate transport	1.07E-03
53	GO:0006072: glycerol-3-phosphate metabolic process	1.07E-03
54	GO:0042538: hyperosmotic salinity response	1.09E-03
55	GO:0001944: vasculature development	1.21E-03
56	GO:0010222: stem vascular tissue pattern formation	1.43E-03
57	GO:0006536: glutamate metabolic process	1.43E-03
58	GO:0022622: root system development	1.43E-03
59	GO:0006552: leucine catabolic process	1.43E-03
60	GO:0015867: ATP transport	1.43E-03
61	GO:0071585: detoxification of cadmium ion	1.43E-03
62	GO:0042631: cellular response to water deprivation	1.54E-03
63	GO:0048868: pollen tube development	1.66E-03
64	GO:0009247: glycolipid biosynthetic process	1.81E-03
65	GO:0071423: malate transmembrane transport	1.81E-03
66	GO:0045487: gibberellin catabolic process	1.81E-03
67	GO:0009416: response to light stimulus	1.83E-03
68	GO:0009749: response to glucose	1.91E-03
69	GO:0000302: response to reactive oxygen species	2.04E-03
70	GO:0006796: phosphate-containing compound metabolic process	2.24E-03
71	GO:1900425: negative regulation of defense response to bacterium	2.24E-03
72	GO:0006574: valine catabolic process	2.24E-03
73	GO:0015866: ADP transport	2.24E-03
74	GO:0048232: male gamete generation	2.24E-03
75	GO:0009651: response to salt stress	2.34E-03
76	GO:0045926: negative regulation of growth	2.69E-03
77	GO:0009082: branched-chain amino acid biosynthetic process	2.69E-03
78	GO:0098655: cation transmembrane transport	2.69E-03
79	GO:0010555: response to mannitol	2.69E-03
80	GO:0071470: cellular response to osmotic stress	2.69E-03
81	GO:1902074: response to salt	3.16E-03
82	GO:0032880: regulation of protein localization	3.16E-03
83	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.16E-03
84	GO:0006401: RNA catabolic process	3.16E-03
85	GO:0009610: response to symbiotic fungus	3.16E-03
86	GO:0030497: fatty acid elongation	3.16E-03
87	GO:0008272: sulfate transport	3.16E-03
88	GO:0050829: defense response to Gram-negative bacterium	3.16E-03
89	GO:0019375: galactolipid biosynthetic process	3.67E-03
90	GO:0050821: protein stabilization	3.67E-03
91	GO:0007155: cell adhesion	3.67E-03
92	GO:0009819: drought recovery	3.67E-03
93	GO:0006811: ion transport	4.21E-03
94	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	4.75E-03
95	GO:0010345: suberin biosynthetic process	4.75E-03
96	GO:0098656: anion transmembrane transport	4.75E-03
97	GO:2000280: regulation of root development	5.32E-03
98	GO:0042761: very long-chain fatty acid biosynthetic process	5.32E-03
99	GO:0006631: fatty acid metabolic process	5.75E-03
100	GO:0051026: chiasma assembly	5.93E-03
101	GO:0051707: response to other organism	6.23E-03
102	GO:0018119: peptidyl-cysteine S-nitrosylation	6.55E-03
103	GO:0010105: negative regulation of ethylene-activated signaling pathway	7.20E-03
104	GO:0005983: starch catabolic process	7.20E-03
105	GO:0045037: protein import into chloroplast stroma	7.20E-03
106	GO:0010588: cotyledon vascular tissue pattern formation	7.87E-03
107	GO:2000012: regulation of auxin polar transport	7.87E-03
108	GO:0006364: rRNA processing	8.40E-03
109	GO:0010143: cutin biosynthetic process	8.56E-03
110	GO:0070588: calcium ion transmembrane transport	9.27E-03
111	GO:0009225: nucleotide-sugar metabolic process	9.27E-03
112	GO:0042753: positive regulation of circadian rhythm	1.00E-02
113	GO:0048367: shoot system development	1.03E-02
114	GO:0030150: protein import into mitochondrial matrix	1.08E-02
115	GO:0006457: protein folding	1.10E-02
116	GO:0031408: oxylipin biosynthetic process	1.23E-02
117	GO:0003333: amino acid transmembrane transport	1.23E-02
118	GO:0051260: protein homooligomerization	1.23E-02
119	GO:0007131: reciprocal meiotic recombination	1.32E-02
120	GO:0030433: ubiquitin-dependent ERAD pathway	1.32E-02
121	GO:0010017: red or far-red light signaling pathway	1.32E-02
122	GO:0016042: lipid catabolic process	1.35E-02
123	GO:0009751: response to salicylic acid	1.37E-02
124	GO:0009686: gibberellin biosynthetic process	1.40E-02
125	GO:0008284: positive regulation of cell proliferation	1.57E-02
126	GO:0070417: cellular response to cold	1.57E-02
127	GO:0010501: RNA secondary structure unwinding	1.66E-02
128	GO:0000413: protein peptidyl-prolyl isomerization	1.66E-02
129	GO:0009958: positive gravitropism	1.75E-02
130	GO:0071472: cellular response to salt stress	1.75E-02
131	GO:0006814: sodium ion transport	1.84E-02
132	GO:0008654: phospholipid biosynthetic process	1.94E-02
133	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.03E-02
134	GO:0071555: cell wall organization	2.15E-02
135	GO:0006351: transcription, DNA-templated	2.21E-02
136	GO:0009639: response to red or far red light	2.33E-02
137	GO:0006310: DNA recombination	2.33E-02
138	GO:0019760: glucosinolate metabolic process	2.33E-02
139	GO:0006470: protein dephosphorylation	2.38E-02
140	GO:0010468: regulation of gene expression	2.48E-02
141	GO:0051607: defense response to virus	2.54E-02
142	GO:0010027: thylakoid membrane organization	2.64E-02
143	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.75E-02
144	GO:0010029: regulation of seed germination	2.75E-02
145	GO:0009555: pollen development	2.88E-02
146	GO:0006950: response to stress	2.97E-02
147	GO:0016049: cell growth	3.08E-02
148	GO:0048527: lateral root development	3.54E-02
149	GO:0006810: transport	3.78E-02
150	GO:0005975: carbohydrate metabolic process	3.96E-02
151	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.12E-02
152	GO:0009744: response to sucrose	4.52E-02
153	GO:0006355: regulation of transcription, DNA-templated	4.59E-02
154	GO:0008643: carbohydrate transport	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0005534: galactose binding	0.00E+00
2	GO:0009922: fatty acid elongase activity	1.17E-09
3	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.35E-08
4	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.35E-08
5	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.35E-08
6	GO:0046423: allene-oxide cyclase activity	7.40E-06
7	GO:0070330: aromatase activity	7.40E-06
8	GO:0018685: alkane 1-monooxygenase activity	5.00E-05
9	GO:0015297: antiporter activity	8.13E-05
10	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	2.06E-04
11	GO:0015245: fatty acid transporter activity	2.06E-04
12	GO:0090422: thiamine pyrophosphate transporter activity	2.06E-04
13	GO:0090440: abscisic acid transporter activity	2.06E-04
14	GO:1901677: phosphate transmembrane transporter activity	4.62E-04
15	GO:0015180: L-alanine transmembrane transporter activity	4.62E-04
16	GO:0016629: 12-oxophytodienoate reductase activity	4.62E-04
17	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	4.62E-04
18	GO:0015117: thiosulfate transmembrane transporter activity	4.62E-04
19	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	7.52E-04
20	GO:0005310: dicarboxylic acid transmembrane transporter activity	7.52E-04
21	GO:0015141: succinate transmembrane transporter activity	7.52E-04
22	GO:0035250: UDP-galactosyltransferase activity	1.07E-03
23	GO:0052656: L-isoleucine transaminase activity	1.07E-03
24	GO:0052654: L-leucine transaminase activity	1.07E-03
25	GO:0004351: glutamate decarboxylase activity	1.07E-03
26	GO:0052655: L-valine transaminase activity	1.07E-03
27	GO:0015189: L-lysine transmembrane transporter activity	1.07E-03
28	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.07E-03
29	GO:0015181: arginine transmembrane transporter activity	1.07E-03
30	GO:0005432: calcium:sodium antiporter activity	1.07E-03
31	GO:0015131: oxaloacetate transmembrane transporter activity	1.07E-03
32	GO:0008526: phosphatidylinositol transporter activity	1.43E-03
33	GO:0050378: UDP-glucuronate 4-epimerase activity	1.43E-03
34	GO:0005313: L-glutamate transmembrane transporter activity	1.43E-03
35	GO:0004084: branched-chain-amino-acid transaminase activity	1.43E-03
36	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.81E-03
37	GO:0080122: AMP transmembrane transporter activity	1.81E-03
38	GO:0016746: transferase activity, transferring acyl groups	1.93E-03
39	GO:0004556: alpha-amylase activity	2.24E-03
40	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.24E-03
41	GO:0005347: ATP transmembrane transporter activity	2.69E-03
42	GO:0015217: ADP transmembrane transporter activity	2.69E-03
43	GO:0004427: inorganic diphosphatase activity	3.16E-03
44	GO:0015140: malate transmembrane transporter activity	3.16E-03
45	GO:0004004: ATP-dependent RNA helicase activity	3.45E-03
46	GO:0015491: cation:cation antiporter activity	3.67E-03
47	GO:0015288: porin activity	3.67E-03
48	GO:0008289: lipid binding	5.14E-03
49	GO:0044212: transcription regulatory region DNA binding	6.30E-03
50	GO:0043565: sequence-specific DNA binding	6.33E-03
51	GO:0016788: hydrolase activity, acting on ester bonds	6.64E-03
52	GO:0015116: sulfate transmembrane transporter activity	7.20E-03
53	GO:0005262: calcium channel activity	7.87E-03
54	GO:0015114: phosphate ion transmembrane transporter activity	7.87E-03
55	GO:0000175: 3'-5'-exoribonuclease activity	7.87E-03
56	GO:0015266: protein channel activity	7.87E-03
57	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	8.56E-03
58	GO:0008083: growth factor activity	8.56E-03
59	GO:0015171: amino acid transmembrane transporter activity	9.31E-03
60	GO:0052689: carboxylic ester hydrolase activity	9.68E-03
61	GO:0003677: DNA binding	9.80E-03
62	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.07E-02
63	GO:0004540: ribonuclease activity	1.23E-02
64	GO:0018024: histone-lysine N-methyltransferase activity	1.57E-02
65	GO:0010181: FMN binding	1.84E-02
66	GO:0016791: phosphatase activity	2.33E-02
67	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.08E-02
68	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.19E-02
69	GO:0005096: GTPase activator activity	3.31E-02
70	GO:0015238: drug transmembrane transporter activity	3.31E-02
71	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.06E-02

Rank	GO Term	Adjusted P value
1	GO:0032039: integrator complex	0.00E+00
2	GO:0034426: etioplast membrane	0.00E+00
3	GO:0046658: anchored component of plasma membrane	1.61E-04
4	GO:0031357: integral component of chloroplast inner membrane	4.62E-04
5	GO:0005743: mitochondrial inner membrane	5.91E-04
6	GO:0009897: external side of plasma membrane	7.52E-04
7	GO:0031225: anchored component of membrane	1.05E-03
8	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.07E-03
9	GO:0009527: plastid outer membrane	1.43E-03
10	GO:0000178: exosome (RNase complex)	1.81E-03
11	GO:0005778: peroxisomal membrane	2.62E-03
12	GO:0031305: integral component of mitochondrial inner membrane	3.67E-03
13	GO:0046930: pore complex	4.20E-03
14	GO:0009941: chloroplast envelope	5.20E-03
15	GO:0016604: nuclear body	5.32E-03
16	GO:0009505: plant-type cell wall	9.33E-03
17	GO:0016021: integral component of membrane	1.03E-02
18	GO:0015629: actin cytoskeleton	1.40E-02
19	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.48E-02
20	GO:0000790: nuclear chromatin	1.57E-02
21	GO:0005770: late endosome	1.75E-02
22	GO:0016020: membrane	1.88E-02
23	GO:0005694: chromosome	2.13E-02
24	GO:0032580: Golgi cisterna membrane	2.33E-02
25	GO:0010319: stromule	2.43E-02
26	GO:0000932: P-body	2.64E-02
27	GO:0005783: endoplasmic reticulum	3.13E-02
28	GO:0009707: chloroplast outer membrane	3.19E-02
29	GO:0005874: microtubule	3.85E-02
30	GO:0005576: extracellular region	3.90E-02
31	GO:0031902: late endosome membrane	4.27E-02