co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G50910

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001143: N-methylnicotinate transport	0.00E+00
2	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
3	GO:0019567: arabinose biosynthetic process	0.00E+00
4	GO:0097237: cellular response to toxic substance	0.00E+00
5	GO:2001142: nicotinate transport	0.00E+00
6	GO:0045227: capsule polysaccharide biosynthetic process	1.51E-08
7	GO:0033358: UDP-L-arabinose biosynthetic process	1.51E-08
8	GO:0009225: nucleotide-sugar metabolic process	4.06E-06
9	GO:0006012: galactose metabolic process	1.14E-05
10	GO:0071669: plant-type cell wall organization or biogenesis	3.11E-05
11	GO:0009651: response to salt stress	7.88E-05
12	GO:0009832: plant-type cell wall biogenesis	8.04E-05
13	GO:0080157: regulation of plant-type cell wall organization or biogenesis	8.09E-05
14	GO:1900384: regulation of flavonol biosynthetic process	8.09E-05
15	GO:0034214: protein hexamerization	8.09E-05
16	GO:0015706: nitrate transport	1.30E-04
17	GO:0000266: mitochondrial fission	1.30E-04
18	GO:0015865: purine nucleotide transport	1.93E-04
19	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.93E-04
20	GO:0090351: seedling development	1.93E-04
21	GO:0009446: putrescine biosynthetic process	1.93E-04
22	GO:0006527: arginine catabolic process	1.93E-04
23	GO:0010372: positive regulation of gibberellin biosynthetic process	1.93E-04
24	GO:0009812: flavonoid metabolic process	1.93E-04
25	GO:0055085: transmembrane transport	2.76E-04
26	GO:0006065: UDP-glucuronate biosynthetic process	3.24E-04
27	GO:0052546: cell wall pectin metabolic process	3.24E-04
28	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	3.24E-04
29	GO:0080024: indolebutyric acid metabolic process	4.66E-04
30	GO:0046836: glycolipid transport	4.66E-04
31	GO:0046902: regulation of mitochondrial membrane permeability	4.66E-04
32	GO:0008152: metabolic process	5.09E-04
33	GO:0033356: UDP-L-arabinose metabolic process	6.21E-04
34	GO:0008295: spermidine biosynthetic process	6.21E-04
35	GO:0015867: ATP transport	6.21E-04
36	GO:0006461: protein complex assembly	7.86E-04
37	GO:0032957: inositol trisphosphate metabolic process	7.86E-04
38	GO:0042128: nitrate assimilation	9.37E-04
39	GO:0033365: protein localization to organelle	9.59E-04
40	GO:0006596: polyamine biosynthetic process	9.59E-04
41	GO:0015866: ADP transport	9.59E-04
42	GO:0046855: inositol phosphate dephosphorylation	9.59E-04
43	GO:0009611: response to wounding	1.07E-03
44	GO:0030244: cellulose biosynthetic process	1.09E-03
45	GO:0031930: mitochondria-nucleus signaling pathway	1.14E-03
46	GO:0000338: protein deneddylation	1.34E-03
47	GO:0006402: mRNA catabolic process	1.54E-03
48	GO:0006839: mitochondrial transport	1.55E-03
49	GO:0080167: response to karrikin	1.65E-03
50	GO:0006972: hyperosmotic response	1.76E-03
51	GO:0009699: phenylpropanoid biosynthetic process	1.76E-03
52	GO:0009636: response to toxic substance	1.96E-03
53	GO:0009835: fruit ripening	1.98E-03
54	GO:0008202: steroid metabolic process	2.22E-03
55	GO:0010215: cellulose microfibril organization	2.46E-03
56	GO:0019538: protein metabolic process	2.46E-03
57	GO:0046856: phosphatidylinositol dephosphorylation	2.71E-03
58	GO:0015770: sucrose transport	2.71E-03
59	GO:0010152: pollen maturation	2.97E-03
60	GO:0034605: cellular response to heat	3.52E-03
61	GO:0046854: phosphatidylinositol phosphorylation	3.81E-03
62	GO:0010167: response to nitrate	3.81E-03
63	GO:0009901: anther dehiscence	3.81E-03
64	GO:0005985: sucrose metabolic process	3.81E-03
65	GO:0045333: cellular respiration	4.40E-03
66	GO:0016036: cellular response to phosphate starvation	5.30E-03
67	GO:0007005: mitochondrion organization	5.34E-03
68	GO:0009693: ethylene biosynthetic process	5.67E-03
69	GO:0009306: protein secretion	6.01E-03
70	GO:0000271: polysaccharide biosynthetic process	6.70E-03
71	GO:0048868: pollen tube development	7.06E-03
72	GO:0009646: response to absence of light	7.42E-03
73	GO:0006635: fatty acid beta-oxidation	8.17E-03
74	GO:0071554: cell wall organization or biogenesis	8.17E-03
75	GO:0031047: gene silencing by RNA	8.56E-03
76	GO:0009737: response to abscisic acid	9.50E-03
77	GO:0016579: protein deubiquitination	1.02E-02
78	GO:0001666: response to hypoxia	1.06E-02
79	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.10E-02
80	GO:0010200: response to chitin	1.13E-02
81	GO:0016049: cell growth	1.23E-02
82	GO:0048767: root hair elongation	1.32E-02
83	GO:0009813: flavonoid biosynthetic process	1.32E-02
84	GO:0009407: toxin catabolic process	1.37E-02
85	GO:0006099: tricarboxylic acid cycle	1.56E-02
86	GO:0009751: response to salicylic acid	1.59E-02
87	GO:0009753: response to jasmonic acid	1.73E-02
88	GO:0009640: photomorphogenesis	1.80E-02
89	GO:0009409: response to cold	2.01E-02
90	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.14E-02
91	GO:0006810: transport	2.23E-02
92	GO:0009809: lignin biosynthetic process	2.23E-02
93	GO:0009585: red, far-red light phototransduction	2.23E-02
94	GO:0006468: protein phosphorylation	2.25E-02
95	GO:0046686: response to cadmium ion	2.40E-02
96	GO:0009909: regulation of flower development	2.40E-02
97	GO:0048316: seed development	2.57E-02
98	GO:0009555: pollen development	2.87E-02
99	GO:0009742: brassinosteroid mediated signaling pathway	2.99E-02
100	GO:0009845: seed germination	3.56E-02
101	GO:0009793: embryo development ending in seed dormancy	3.91E-02
102	GO:0016310: phosphorylation	4.20E-02
103	GO:0007166: cell surface receptor signaling pathway	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
2	GO:0090416: nicotinate transporter activity	0.00E+00
3	GO:0050373: UDP-arabinose 4-epimerase activity	1.51E-08
4	GO:0003978: UDP-glucose 4-epimerase activity	1.22E-07
5	GO:0015112: nitrate transmembrane transporter activity	7.87E-05
6	GO:0008792: arginine decarboxylase activity	8.09E-05
7	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	8.09E-05
8	GO:1990585: hydroxyproline O-arabinosyltransferase activity	1.93E-04
9	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	1.93E-04
10	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	1.93E-04
11	GO:0052691: UDP-arabinopyranose mutase activity	1.93E-04
12	GO:0050736: O-malonyltransferase activity	1.93E-04
13	GO:0003979: UDP-glucose 6-dehydrogenase activity	3.24E-04
14	GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity	3.24E-04
15	GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity	4.66E-04
16	GO:0017089: glycolipid transporter activity	4.66E-04
17	GO:0004445: inositol-polyphosphate 5-phosphatase activity	4.66E-04
18	GO:0016758: transferase activity, transferring hexosyl groups	4.78E-04
19	GO:0009916: alternative oxidase activity	6.21E-04
20	GO:0051861: glycolipid binding	6.21E-04
21	GO:0016866: intramolecular transferase activity	6.21E-04
22	GO:0005471: ATP:ADP antiporter activity	7.86E-04
23	GO:0008194: UDP-glycosyltransferase activity	8.49E-04
24	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	9.59E-04
25	GO:0051753: mannan synthase activity	1.14E-03
26	GO:0005347: ATP transmembrane transporter activity	1.14E-03
27	GO:0015217: ADP transmembrane transporter activity	1.14E-03
28	GO:0004012: phospholipid-translocating ATPase activity	1.14E-03
29	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.25E-03
30	GO:0008506: sucrose:proton symporter activity	1.34E-03
31	GO:0016757: transferase activity, transferring glycosyl groups	1.48E-03
32	GO:0052747: sinapyl alcohol dehydrogenase activity	1.54E-03
33	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	1.54E-03
34	GO:0008142: oxysterol binding	1.76E-03
35	GO:0004430: 1-phosphatidylinositol 4-kinase activity	1.76E-03
36	GO:0016207: 4-coumarate-CoA ligase activity	1.98E-03
37	GO:0047617: acyl-CoA hydrolase activity	2.22E-03
38	GO:0015020: glucuronosyltransferase activity	2.46E-03
39	GO:0008515: sucrose transmembrane transporter activity	2.71E-03
40	GO:0045551: cinnamyl-alcohol dehydrogenase activity	2.97E-03
41	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	2.97E-03
42	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.03E-03
43	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.03E-03
44	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.24E-03
45	GO:0001046: core promoter sequence-specific DNA binding	4.40E-03
46	GO:0016301: kinase activity	4.62E-03
47	GO:0015144: carbohydrate transmembrane transporter activity	4.93E-03
48	GO:0019706: protein-cysteine S-palmitoyltransferase activity	5.02E-03
49	GO:0015297: antiporter activity	5.43E-03
50	GO:0005351: sugar:proton symporter activity	5.56E-03
51	GO:0016760: cellulose synthase (UDP-forming) activity	5.67E-03
52	GO:0022891: substrate-specific transmembrane transporter activity	5.67E-03
53	GO:0016853: isomerase activity	7.42E-03
54	GO:0019901: protein kinase binding	7.79E-03
55	GO:0004843: thiol-dependent ubiquitin-specific protease activity	8.17E-03
56	GO:0004518: nuclease activity	8.56E-03
57	GO:0016759: cellulose synthase activity	9.34E-03
58	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	9.75E-03
59	GO:0050660: flavin adenine dinucleotide binding	1.02E-02
60	GO:0016413: O-acetyltransferase activity	1.02E-02
61	GO:0051213: dioxygenase activity	1.06E-02
62	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.31E-02
63	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.46E-02
64	GO:0003824: catalytic activity	1.54E-02
65	GO:0003924: GTPase activity	1.62E-02
66	GO:0009055: electron carrier activity	1.73E-02
67	GO:0004364: glutathione transferase activity	1.75E-02
68	GO:0035091: phosphatidylinositol binding	1.91E-02
69	GO:0015293: symporter activity	1.96E-02
70	GO:0005524: ATP binding	1.98E-02
71	GO:0051287: NAD binding	2.07E-02
72	GO:0016874: ligase activity	2.75E-02
73	GO:0022857: transmembrane transporter activity	2.75E-02
74	GO:0016746: transferase activity, transferring acyl groups	2.93E-02
75	GO:0030170: pyridoxal phosphate binding	3.62E-02
76	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.02E-02
77	GO:0008017: microtubule binding	4.37E-02
78	GO:0005525: GTP binding	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0032580: Golgi cisterna membrane	3.75E-05
2	GO:0045252: oxoglutarate dehydrogenase complex	8.09E-05
3	GO:0016442: RISC complex	8.09E-05
4	GO:0005794: Golgi apparatus	2.15E-04
5	GO:0005743: mitochondrial inner membrane	3.91E-04
6	GO:0030173: integral component of Golgi membrane	1.14E-03
7	GO:0090406: pollen tube	1.74E-03
8	GO:0005779: integral component of peroxisomal membrane	1.76E-03
9	GO:0008180: COP9 signalosome	1.98E-03
10	GO:0010494: cytoplasmic stress granule	1.98E-03
11	GO:0005802: trans-Golgi network	2.12E-03
12	GO:0005740: mitochondrial envelope	2.46E-03
13	GO:0005768: endosome	2.57E-03
14	GO:0090404: pollen tube tip	2.71E-03
15	GO:0048471: perinuclear region of cytoplasm	2.71E-03
16	GO:0005938: cell cortex	3.24E-03
17	GO:0005886: plasma membrane	3.76E-03
18	GO:0070469: respiratory chain	4.70E-03
19	GO:0005741: mitochondrial outer membrane	5.02E-03
20	GO:0009504: cell plate	7.79E-03
21	GO:0000932: P-body	1.06E-02
22	GO:0016020: membrane	1.31E-02
23	GO:0005829: cytosol	1.69E-02
24	GO:0031902: late endosome membrane	1.70E-02
25	GO:0016021: integral component of membrane	1.85E-02
26	GO:0005774: vacuolar membrane	1.97E-02
27	GO:0031966: mitochondrial membrane	2.12E-02
28	GO:0005635: nuclear envelope	2.34E-02
29	GO:0005834: heterotrimeric G-protein complex	2.63E-02
30	GO:0009524: phragmoplast	3.49E-02
31	GO:0005737: cytoplasm	3.54E-02