co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G50340

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010412: mannan metabolic process	0.00E+00
2	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
3	GO:0060627: regulation of vesicle-mediated transport	1.20E-04
4	GO:1902265: abscisic acid homeostasis	1.20E-04
5	GO:0097298: regulation of nucleus size	1.20E-04
6	GO:0031338: regulation of vesicle fusion	1.20E-04
7	GO:0006898: receptor-mediated endocytosis	2.77E-04
8	GO:0015786: UDP-glucose transport	2.77E-04
9	GO:0015709: thiosulfate transport	2.77E-04
10	GO:0071422: succinate transmembrane transport	2.77E-04
11	GO:0044210: 'de novo' CTP biosynthetic process	4.58E-04
12	GO:0016045: detection of bacterium	4.58E-04
13	GO:0010359: regulation of anion channel activity	4.58E-04
14	GO:0090630: activation of GTPase activity	4.58E-04
15	GO:0015783: GDP-fucose transport	4.58E-04
16	GO:1901000: regulation of response to salt stress	6.57E-04
17	GO:0015729: oxaloacetate transport	6.57E-04
18	GO:0072334: UDP-galactose transmembrane transport	6.57E-04
19	GO:0030100: regulation of endocytosis	6.57E-04
20	GO:0015689: molybdate ion transport	8.72E-04
21	GO:0051365: cellular response to potassium ion starvation	8.72E-04
22	GO:0046355: mannan catabolic process	8.72E-04
23	GO:0022622: root system development	8.72E-04
24	GO:0009687: abscisic acid metabolic process	8.72E-04
25	GO:0046345: abscisic acid catabolic process	8.72E-04
26	GO:0032957: inositol trisphosphate metabolic process	1.10E-03
27	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	1.10E-03
28	GO:0071423: malate transmembrane transport	1.10E-03
29	GO:0009823: cytokinin catabolic process	1.10E-03
30	GO:0006656: phosphatidylcholine biosynthetic process	1.10E-03
31	GO:0006873: cellular ion homeostasis	1.10E-03
32	GO:0048497: maintenance of floral organ identity	1.10E-03
33	GO:0006461: protein complex assembly	1.10E-03
34	GO:0006355: regulation of transcription, DNA-templated	1.33E-03
35	GO:0035435: phosphate ion transmembrane transport	1.35E-03
36	GO:0047484: regulation of response to osmotic stress	1.35E-03
37	GO:1900425: negative regulation of defense response to bacterium	1.35E-03
38	GO:0071470: cellular response to osmotic stress	1.61E-03
39	GO:0008272: sulfate transport	1.89E-03
40	GO:0010103: stomatal complex morphogenesis	1.89E-03
41	GO:0032880: regulation of protein localization	1.89E-03
42	GO:0006811: ion transport	1.99E-03
43	GO:0035265: organ growth	2.19E-03
44	GO:0009819: drought recovery	2.19E-03
45	GO:0009690: cytokinin metabolic process	2.19E-03
46	GO:0009704: de-etiolation	2.19E-03
47	GO:0006997: nucleus organization	2.50E-03
48	GO:0006631: fatty acid metabolic process	2.70E-03
49	GO:0009640: photomorphogenesis	2.93E-03
50	GO:0048268: clathrin coat assembly	3.16E-03
51	GO:0007346: regulation of mitotic cell cycle	3.16E-03
52	GO:0009641: shade avoidance	3.51E-03
53	GO:0052544: defense response by callose deposition in cell wall	3.88E-03
54	GO:0045037: protein import into chloroplast stroma	4.26E-03
55	GO:2000012: regulation of auxin polar transport	4.64E-03
56	GO:0043086: negative regulation of catalytic activity	4.64E-03
57	GO:0018107: peptidyl-threonine phosphorylation	4.64E-03
58	GO:0010030: positive regulation of seed germination	5.46E-03
59	GO:0009624: response to nematode	5.58E-03
60	GO:0009833: plant-type primary cell wall biogenesis	5.88E-03
61	GO:0030150: protein import into mitochondrial matrix	6.32E-03
62	GO:0007017: microtubule-based process	6.76E-03
63	GO:0006351: transcription, DNA-templated	6.86E-03
64	GO:0051321: meiotic cell cycle	7.22E-03
65	GO:0080092: regulation of pollen tube growth	7.69E-03
66	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	8.18E-03
67	GO:0010584: pollen exine formation	8.66E-03
68	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.17E-03
69	GO:0008284: positive regulation of cell proliferation	9.17E-03
70	GO:0045490: pectin catabolic process	9.64E-03
71	GO:0010268: brassinosteroid homeostasis	1.02E-02
72	GO:0009960: endosperm development	1.02E-02
73	GO:0009958: positive gravitropism	1.02E-02
74	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.08E-02
75	GO:0006470: protein dephosphorylation	1.10E-02
76	GO:0010183: pollen tube guidance	1.13E-02
77	GO:0009749: response to glucose	1.13E-02
78	GO:0010468: regulation of gene expression	1.15E-02
79	GO:0080156: mitochondrial mRNA modification	1.18E-02
80	GO:0016132: brassinosteroid biosynthetic process	1.18E-02
81	GO:0010583: response to cyclopentenone	1.24E-02
82	GO:0016125: sterol metabolic process	1.36E-02
83	GO:0019760: glucosinolate metabolic process	1.36E-02
84	GO:0009639: response to red or far red light	1.36E-02
85	GO:0009828: plant-type cell wall loosening	1.36E-02
86	GO:0009911: positive regulation of flower development	1.54E-02
87	GO:0010200: response to chitin	1.92E-02
88	GO:0048527: lateral root development	2.05E-02
89	GO:0007568: aging	2.05E-02
90	GO:0016051: carbohydrate biosynthetic process	2.19E-02
91	GO:0009637: response to blue light	2.19E-02
92	GO:0006886: intracellular protein transport	2.30E-02
93	GO:0006839: mitochondrial transport	2.41E-02
94	GO:0006897: endocytosis	2.48E-02
95	GO:0009744: response to sucrose	2.63E-02
96	GO:0006979: response to oxidative stress	2.70E-02
97	GO:0030154: cell differentiation	2.97E-02
98	GO:0042538: hyperosmotic salinity response	3.09E-02
99	GO:0009664: plant-type cell wall organization	3.09E-02
100	GO:0009585: red, far-red light phototransduction	3.25E-02
101	GO:0009873: ethylene-activated signaling pathway	3.54E-02
102	GO:0015031: protein transport	3.60E-02
103	GO:0009409: response to cold	3.89E-02
104	GO:0042545: cell wall modification	4.09E-02
105	GO:0018105: peptidyl-serine phosphorylation	4.26E-02
106	GO:0000398: mRNA splicing, via spliceosome	4.62E-02
107	GO:0009738: abscisic acid-activated signaling pathway	4.69E-02
108	GO:0009611: response to wounding	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0003883: CTP synthase activity	6.48E-06
2	GO:0044212: transcription regulatory region DNA binding	8.90E-06
3	GO:0043565: sequence-specific DNA binding	7.41E-05
4	GO:0004105: choline-phosphate cytidylyltransferase activity	1.20E-04
5	GO:0015117: thiosulfate transmembrane transporter activity	2.77E-04
6	GO:1901677: phosphate transmembrane transporter activity	2.77E-04
7	GO:0017022: myosin binding	2.77E-04
8	GO:0005310: dicarboxylic acid transmembrane transporter activity	4.58E-04
9	GO:0015141: succinate transmembrane transporter activity	4.58E-04
10	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	4.58E-04
11	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	4.58E-04
12	GO:0005457: GDP-fucose transmembrane transporter activity	4.58E-04
13	GO:0047325: inositol tetrakisphosphate 1-kinase activity	4.58E-04
14	GO:0015131: oxaloacetate transmembrane transporter activity	6.57E-04
15	GO:0005460: UDP-glucose transmembrane transporter activity	6.57E-04
16	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	6.57E-04
17	GO:0016985: mannan endo-1,4-beta-mannosidase activity	8.72E-04
18	GO:0015098: molybdate ion transmembrane transporter activity	8.72E-04
19	GO:0010294: abscisic acid glucosyltransferase activity	1.10E-03
20	GO:0005459: UDP-galactose transmembrane transporter activity	1.10E-03
21	GO:0019139: cytokinin dehydrogenase activity	1.10E-03
22	GO:0017137: Rab GTPase binding	1.10E-03
23	GO:0046910: pectinesterase inhibitor activity	1.30E-03
24	GO:0015140: malate transmembrane transporter activity	1.89E-03
25	GO:0015288: porin activity	2.19E-03
26	GO:0016209: antioxidant activity	2.19E-03
27	GO:0008308: voltage-gated anion channel activity	2.50E-03
28	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.88E-03
29	GO:0015020: glucuronosyltransferase activity	3.51E-03
30	GO:0005545: 1-phosphatidylinositol binding	3.51E-03
31	GO:0015116: sulfate transmembrane transporter activity	4.26E-03
32	GO:0015266: protein channel activity	4.64E-03
33	GO:0008083: growth factor activity	5.04E-03
34	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.04E-03
35	GO:0016874: ligase activity	5.26E-03
36	GO:0003924: GTPase activity	5.29E-03
37	GO:0017025: TBP-class protein binding	5.46E-03
38	GO:0043130: ubiquitin binding	6.32E-03
39	GO:0030570: pectate lyase activity	8.18E-03
40	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.98E-03
41	GO:0015297: antiporter activity	9.20E-03
42	GO:0030276: clathrin binding	1.02E-02
43	GO:0005200: structural constituent of cytoskeleton	1.41E-02
44	GO:0008375: acetylglucosaminyltransferase activity	1.66E-02
45	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.85E-02
46	GO:0005096: GTPase activator activity	1.92E-02
47	GO:0061630: ubiquitin protein ligase activity	1.95E-02
48	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.99E-02
49	GO:0046872: metal ion binding	2.04E-02
50	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.05E-02
51	GO:0005525: GTP binding	2.06E-02
52	GO:0004722: protein serine/threonine phosphatase activity	2.44E-02
53	GO:0003690: double-stranded DNA binding	3.33E-02
54	GO:0016298: lipase activity	3.33E-02
55	GO:0015171: amino acid transmembrane transporter activity	3.49E-02
56	GO:0045330: aspartyl esterase activity	3.49E-02
57	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.91E-02
58	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.91E-02
59	GO:0022857: transmembrane transporter activity	4.00E-02
60	GO:0030599: pectinesterase activity	4.00E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0030133: transport vesicle	2.77E-04
3	GO:0005652: nuclear lamina	4.58E-04
4	GO:0009527: plastid outer membrane	8.72E-04
5	GO:0005798: Golgi-associated vesicle	1.35E-03
6	GO:0034399: nuclear periphery	2.19E-03
7	GO:0031305: integral component of mitochondrial inner membrane	2.19E-03
8	GO:0046930: pore complex	2.50E-03
9	GO:0045298: tubulin complex	2.82E-03
10	GO:0016607: nuclear speck	4.79E-03
11	GO:0005622: intracellular	5.56E-03
12	GO:0005769: early endosome	5.88E-03
13	GO:0005905: clathrin-coated pit	7.22E-03
14	GO:0005744: mitochondrial inner membrane presequence translocase complex	8.66E-03
15	GO:0030136: clathrin-coated vesicle	9.17E-03
16	GO:0005615: extracellular space	1.08E-02
17	GO:0031965: nuclear membrane	1.13E-02
18	GO:0009707: chloroplast outer membrane	1.85E-02
19	GO:0005768: endosome	2.34E-02
20	GO:0005681: spliceosomal complex	3.66E-02
21	GO:0010008: endosome membrane	3.74E-02
22	GO:0012505: endomembrane system	4.09E-02
23	GO:0005654: nucleoplasm	4.80E-02