GO Enrichment Analysis of Co-expressed Genes with
AT3G50270
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018316: peptide cross-linking via L-cystine | 0.00E+00 |
| 2 | GO:0006907: pinocytosis | 0.00E+00 |
| 3 | GO:0015739: sialic acid transport | 0.00E+00 |
| 4 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 6 | GO:0007037: vacuolar phosphate transport | 0.00E+00 |
| 7 | GO:0046900: tetrahydrofolylpolyglutamate metabolic process | 1.69E-04 |
| 8 | GO:0034971: histone H3-R17 methylation | 1.69E-04 |
| 9 | GO:0042371: vitamin K biosynthetic process | 1.69E-04 |
| 10 | GO:0071454: cellular response to anoxia | 1.69E-04 |
| 11 | GO:0048438: floral whorl development | 1.69E-04 |
| 12 | GO:0034970: histone H3-R2 methylation | 1.69E-04 |
| 13 | GO:0034972: histone H3-R26 methylation | 1.69E-04 |
| 14 | GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole | 3.83E-04 |
| 15 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 3.83E-04 |
| 16 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 3.83E-04 |
| 17 | GO:0080153: negative regulation of reductive pentose-phosphate cycle | 3.83E-04 |
| 18 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.83E-04 |
| 19 | GO:0043039: tRNA aminoacylation | 3.83E-04 |
| 20 | GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation | 6.25E-04 |
| 21 | GO:0033014: tetrapyrrole biosynthetic process | 8.93E-04 |
| 22 | GO:1902476: chloride transmembrane transport | 8.93E-04 |
| 23 | GO:0071483: cellular response to blue light | 1.18E-03 |
| 24 | GO:0042274: ribosomal small subunit biogenesis | 1.18E-03 |
| 25 | GO:0031935: regulation of chromatin silencing | 1.18E-03 |
| 26 | GO:0009765: photosynthesis, light harvesting | 1.18E-03 |
| 27 | GO:0016123: xanthophyll biosynthetic process | 1.50E-03 |
| 28 | GO:0071423: malate transmembrane transport | 1.50E-03 |
| 29 | GO:0016120: carotene biosynthetic process | 1.50E-03 |
| 30 | GO:0010190: cytochrome b6f complex assembly | 1.85E-03 |
| 31 | GO:0016070: RNA metabolic process | 1.85E-03 |
| 32 | GO:0031053: primary miRNA processing | 1.85E-03 |
| 33 | GO:0000741: karyogamy | 1.85E-03 |
| 34 | GO:0010076: maintenance of floral meristem identity | 2.22E-03 |
| 35 | GO:0017148: negative regulation of translation | 2.22E-03 |
| 36 | GO:0010019: chloroplast-nucleus signaling pathway | 2.22E-03 |
| 37 | GO:0016126: sterol biosynthetic process | 2.22E-03 |
| 38 | GO:0006821: chloride transport | 2.61E-03 |
| 39 | GO:1900056: negative regulation of leaf senescence | 2.61E-03 |
| 40 | GO:0010196: nonphotochemical quenching | 2.61E-03 |
| 41 | GO:0080111: DNA demethylation | 2.61E-03 |
| 42 | GO:0009704: de-etiolation | 3.02E-03 |
| 43 | GO:0045292: mRNA cis splicing, via spliceosome | 3.02E-03 |
| 44 | GO:0042255: ribosome assembly | 3.02E-03 |
| 45 | GO:0006353: DNA-templated transcription, termination | 3.02E-03 |
| 46 | GO:0009910: negative regulation of flower development | 3.33E-03 |
| 47 | GO:0071482: cellular response to light stimulus | 3.46E-03 |
| 48 | GO:0022900: electron transport chain | 3.46E-03 |
| 49 | GO:0009821: alkaloid biosynthetic process | 3.91E-03 |
| 50 | GO:0006783: heme biosynthetic process | 3.91E-03 |
| 51 | GO:0015780: nucleotide-sugar transport | 3.91E-03 |
| 52 | GO:0098656: anion transmembrane transport | 3.91E-03 |
| 53 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.38E-03 |
| 54 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.38E-03 |
| 55 | GO:0009658: chloroplast organization | 4.51E-03 |
| 56 | GO:0045036: protein targeting to chloroplast | 4.87E-03 |
| 57 | GO:0051555: flavonol biosynthetic process | 4.87E-03 |
| 58 | GO:0043085: positive regulation of catalytic activity | 5.38E-03 |
| 59 | GO:0006352: DNA-templated transcription, initiation | 5.38E-03 |
| 60 | GO:0010582: floral meristem determinacy | 5.91E-03 |
| 61 | GO:0009767: photosynthetic electron transport chain | 6.46E-03 |
| 62 | GO:0010207: photosystem II assembly | 7.02E-03 |
| 63 | GO:0009266: response to temperature stimulus | 7.02E-03 |
| 64 | GO:0034605: cellular response to heat | 7.02E-03 |
| 65 | GO:0006541: glutamine metabolic process | 7.02E-03 |
| 66 | GO:0019253: reductive pentose-phosphate cycle | 7.02E-03 |
| 67 | GO:0006810: transport | 7.47E-03 |
| 68 | GO:0090351: seedling development | 7.60E-03 |
| 69 | GO:0000162: tryptophan biosynthetic process | 8.20E-03 |
| 70 | GO:0006289: nucleotide-excision repair | 8.81E-03 |
| 71 | GO:0006418: tRNA aminoacylation for protein translation | 9.44E-03 |
| 72 | GO:0007017: microtubule-based process | 9.44E-03 |
| 73 | GO:0070417: cellular response to cold | 1.28E-02 |
| 74 | GO:0016117: carotenoid biosynthetic process | 1.28E-02 |
| 75 | GO:0008033: tRNA processing | 1.36E-02 |
| 76 | GO:0009958: positive gravitropism | 1.43E-02 |
| 77 | GO:0010197: polar nucleus fusion | 1.43E-02 |
| 78 | GO:0009851: auxin biosynthetic process | 1.58E-02 |
| 79 | GO:0009451: RNA modification | 1.60E-02 |
| 80 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.66E-02 |
| 81 | GO:0032502: developmental process | 1.74E-02 |
| 82 | GO:0000910: cytokinesis | 2.07E-02 |
| 83 | GO:0055114: oxidation-reduction process | 2.23E-02 |
| 84 | GO:0015995: chlorophyll biosynthetic process | 2.42E-02 |
| 85 | GO:0006811: ion transport | 2.79E-02 |
| 86 | GO:0009744: response to sucrose | 3.69E-02 |
| 87 | GO:0008643: carbohydrate transport | 3.91E-02 |
| 88 | GO:0006260: DNA replication | 4.23E-02 |
| 89 | GO:0000165: MAPK cascade | 4.23E-02 |
| 90 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.68E-02 |
| 91 | GO:0009793: embryo development ending in seed dormancy | 4.81E-02 |
| 92 | GO:0009909: regulation of flower development | 4.91E-02 |
| 93 | GO:0006417: regulation of translation | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015136: sialic acid transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0047793: cycloeucalenol cycloisomerase activity | 0.00E+00 |
| 3 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 4 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 5 | GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 7 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 8 | GO:0008242: omega peptidase activity | 1.69E-04 |
| 9 | GO:0046906: tetrapyrrole binding | 1.69E-04 |
| 10 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 1.69E-04 |
| 11 | GO:0004831: tyrosine-tRNA ligase activity | 1.69E-04 |
| 12 | GO:0004325: ferrochelatase activity | 1.69E-04 |
| 13 | GO:0034722: gamma-glutamyl-peptidase activity | 3.83E-04 |
| 14 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 3.83E-04 |
| 15 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 3.83E-04 |
| 16 | GO:0080045: quercetin 3'-O-glucosyltransferase activity | 3.83E-04 |
| 17 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 3.83E-04 |
| 18 | GO:0000900: translation repressor activity, nucleic acid binding | 6.25E-04 |
| 19 | GO:0017176: phosphatidylinositol N-acetylglucosaminyltransferase activity | 6.25E-04 |
| 20 | GO:0008469: histone-arginine N-methyltransferase activity | 6.25E-04 |
| 21 | GO:0004180: carboxypeptidase activity | 6.25E-04 |
| 22 | GO:0004848: ureidoglycolate hydrolase activity | 6.25E-04 |
| 23 | GO:0000339: RNA cap binding | 8.93E-04 |
| 24 | GO:0043023: ribosomal large subunit binding | 8.93E-04 |
| 25 | GO:0000254: C-4 methylsterol oxidase activity | 8.93E-04 |
| 26 | GO:0016851: magnesium chelatase activity | 8.93E-04 |
| 27 | GO:0005253: anion channel activity | 1.18E-03 |
| 28 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.18E-03 |
| 29 | GO:0001053: plastid sigma factor activity | 1.18E-03 |
| 30 | GO:0004834: tryptophan synthase activity | 1.18E-03 |
| 31 | GO:0016987: sigma factor activity | 1.18E-03 |
| 32 | GO:0008080: N-acetyltransferase activity | 1.26E-03 |
| 33 | GO:0048038: quinone binding | 1.54E-03 |
| 34 | GO:0004518: nuclease activity | 1.65E-03 |
| 35 | GO:0016491: oxidoreductase activity | 1.72E-03 |
| 36 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.78E-03 |
| 37 | GO:0005247: voltage-gated chloride channel activity | 1.85E-03 |
| 38 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 1.85E-03 |
| 39 | GO:0019899: enzyme binding | 2.61E-03 |
| 40 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 2.61E-03 |
| 41 | GO:0015140: malate transmembrane transporter activity | 2.61E-03 |
| 42 | GO:0008194: UDP-glycosyltransferase activity | 2.99E-03 |
| 43 | GO:0004525: ribonuclease III activity | 3.02E-03 |
| 44 | GO:0003723: RNA binding | 3.29E-03 |
| 45 | GO:0016844: strictosidine synthase activity | 4.38E-03 |
| 46 | GO:0005315: inorganic phosphate transmembrane transporter activity | 6.46E-03 |
| 47 | GO:0031072: heat shock protein binding | 6.46E-03 |
| 48 | GO:0003690: double-stranded DNA binding | 6.54E-03 |
| 49 | GO:0008131: primary amine oxidase activity | 7.02E-03 |
| 50 | GO:0008061: chitin binding | 7.60E-03 |
| 51 | GO:0003887: DNA-directed DNA polymerase activity | 8.20E-03 |
| 52 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 8.22E-03 |
| 53 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 8.22E-03 |
| 54 | GO:0022857: transmembrane transporter activity | 8.47E-03 |
| 55 | GO:0019843: rRNA binding | 1.13E-02 |
| 56 | GO:0003727: single-stranded RNA binding | 1.21E-02 |
| 57 | GO:0008514: organic anion transmembrane transporter activity | 1.21E-02 |
| 58 | GO:0004812: aminoacyl-tRNA ligase activity | 1.28E-02 |
| 59 | GO:0005506: iron ion binding | 1.37E-02 |
| 60 | GO:0005351: sugar:proton symporter activity | 1.53E-02 |
| 61 | GO:0008483: transaminase activity | 1.99E-02 |
| 62 | GO:0016788: hydrolase activity, acting on ester bonds | 2.47E-02 |
| 63 | GO:0008236: serine-type peptidase activity | 2.51E-02 |
| 64 | GO:0004497: monooxygenase activity | 3.00E-02 |
| 65 | GO:0003746: translation elongation factor activity | 3.08E-02 |
| 66 | GO:0004185: serine-type carboxypeptidase activity | 3.69E-02 |
| 67 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.91E-02 |
| 68 | GO:0051287: NAD binding | 4.23E-02 |
| 69 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.57E-02 |
| 70 | GO:0004519: endonuclease activity | 4.79E-02 |
| 71 | GO:0003777: microtubule motor activity | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.97E-16 |
| 2 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.91E-06 |
| 3 | GO:0005845: mRNA cap binding complex | 1.69E-04 |
| 4 | GO:0005846: nuclear cap binding complex | 3.83E-04 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 4.42E-04 |
| 6 | GO:0042651: thylakoid membrane | 7.14E-04 |
| 7 | GO:0031969: chloroplast membrane | 1.12E-03 |
| 8 | GO:0030286: dynein complex | 1.18E-03 |
| 9 | GO:0055035: plastid thylakoid membrane | 1.50E-03 |
| 10 | GO:0034707: chloride channel complex | 1.85E-03 |
| 11 | GO:0009840: chloroplastic endopeptidase Clp complex | 2.22E-03 |
| 12 | GO:0000123: histone acetyltransferase complex | 2.61E-03 |
| 13 | GO:0046930: pore complex | 3.46E-03 |
| 14 | GO:0009570: chloroplast stroma | 5.75E-03 |
| 15 | GO:0005875: microtubule associated complex | 8.20E-03 |
| 16 | GO:0043234: protein complex | 8.20E-03 |
| 17 | GO:0015935: small ribosomal subunit | 1.01E-02 |
| 18 | GO:0043231: intracellular membrane-bounded organelle | 1.10E-02 |
| 19 | GO:0009705: plant-type vacuole membrane | 1.56E-02 |
| 20 | GO:0016021: integral component of membrane | 3.37E-02 |
| 21 | GO:0031966: mitochondrial membrane | 4.34E-02 |