Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G49990

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0039694: viral RNA genome replication0.00E+00
2GO:0045604: regulation of epidermal cell differentiation5.03E-05
3GO:0048444: floral organ morphogenesis2.11E-04
4GO:0010077: maintenance of inflorescence meristem identity2.11E-04
5GO:0045995: regulation of embryonic development2.50E-04
6GO:0001522: pseudouridine synthesis2.90E-04
7GO:0019827: stem cell population maintenance2.90E-04
8GO:2000024: regulation of leaf development3.74E-04
9GO:0001708: cell fate specification3.74E-04
10GO:0009790: embryo development3.94E-04
11GO:0006349: regulation of gene expression by genetic imprinting4.18E-04
12GO:0009451: RNA modification4.74E-04
13GO:0010501: RNA secondary structure unwinding1.19E-03
14GO:0006606: protein import into nucleus1.19E-03
15GO:0009960: endosperm development1.25E-03
16GO:0010305: leaf vascular tissue pattern formation1.25E-03
17GO:0048825: cotyledon development1.37E-03
18GO:0000910: cytokinesis1.76E-03
19GO:0009926: auxin polar transport3.04E-03
20GO:0006260: DNA replication3.46E-03
21GO:0006364: rRNA processing3.72E-03
22GO:0042254: ribosome biogenesis9.46E-03
23GO:0009793: embryo development ending in seed dormancy1.01E-02
24GO:0045892: negative regulation of transcription, DNA-templated1.25E-02
25GO:0032259: methylation1.39E-02
26GO:0048364: root development1.47E-02
27GO:0051301: cell division2.29E-02
28GO:0009414: response to water deprivation3.50E-02
29GO:0009409: response to cold4.42E-02
RankGO TermAdjusted P value
1GO:0004004: ATP-dependent RNA helicase activity7.03E-05
2GO:0004519: endonuclease activity1.02E-04
3GO:0003723: RNA binding2.03E-04
4GO:0008026: ATP-dependent helicase activity2.86E-04
5GO:0003887: DNA-directed DNA polymerase activity7.53E-04
6GO:0000166: nucleotide binding2.18E-03
7GO:0005096: GTPase activator activity2.26E-03
8GO:0004386: helicase activity5.02E-03
9GO:0008168: methyltransferase activity9.10E-03
10GO:0005525: GTP binding3.07E-02
11GO:0005524: ATP binding4.35E-02
RankGO TermAdjusted P value
1GO:0019034: viral replication complex0.00E+00
2GO:0032153: cell division site0.00E+00
3GO:0005730: nucleolus1.09E-04
4GO:0005634: nucleus1.18E-04
5GO:0043234: protein complex7.53E-04
6GO:0009504: cell plate1.37E-03
7GO:0031965: nuclear membrane1.37E-03
8GO:0005819: spindle2.72E-03
9GO:0005635: nuclear envelope3.89E-03
10GO:0009524: phragmoplast5.72E-03
11GO:0080008: Cul4-RING E3 ubiquitin ligase complex9.97E-03
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Gene type



Gene DE type