Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G49780

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0016102: diterpenoid biosynthetic process0.00E+00
2GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
3GO:0043201: response to leucine0.00E+00
4GO:0080052: response to histidine0.00E+00
5GO:0080053: response to phenylalanine0.00E+00
6GO:0033587: shikimate biosynthetic process0.00E+00
7GO:1901430: positive regulation of syringal lignin biosynthetic process3.12E-05
8GO:0045901: positive regulation of translational elongation7.88E-05
9GO:0015802: basic amino acid transport7.88E-05
10GO:0006452: translational frameshifting7.88E-05
11GO:0042939: tripeptide transport7.88E-05
12GO:0045905: positive regulation of translational termination7.88E-05
13GO:0016998: cell wall macromolecule catabolic process7.90E-05
14GO:0006954: inflammatory response1.37E-04
15GO:0010116: positive regulation of abscisic acid biosynthetic process2.04E-04
16GO:0042938: dipeptide transport2.76E-04
17GO:0033356: UDP-L-arabinose metabolic process2.76E-04
18GO:0009164: nucleoside catabolic process3.53E-04
19GO:0000304: response to singlet oxygen3.53E-04
20GO:0009228: thiamine biosynthetic process4.34E-04
21GO:0006869: lipid transport4.99E-04
22GO:0051707: response to other organism5.38E-04
23GO:1902074: response to salt6.07E-04
24GO:0080027: response to herbivore6.07E-04
25GO:0071669: plant-type cell wall organization or biogenesis6.07E-04
26GO:0050829: defense response to Gram-negative bacterium6.07E-04
27GO:1900057: positive regulation of leaf senescence6.07E-04
28GO:0009753: response to jasmonic acid6.31E-04
29GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.99E-04
30GO:0009809: lignin biosynthetic process7.16E-04
31GO:0006857: oligopeptide transport7.65E-04
32GO:0022900: electron transport chain7.94E-04
33GO:0010497: plasmodesmata-mediated intercellular transport7.94E-04
34GO:0006098: pentose-phosphate shunt8.92E-04
35GO:0016573: histone acetylation9.92E-04
36GO:2000280: regulation of root development9.92E-04
37GO:0006032: chitin catabolic process1.10E-03
38GO:0009611: response to wounding1.20E-03
39GO:0009682: induced systemic resistance1.20E-03
40GO:0052544: defense response by callose deposition in cell wall1.20E-03
41GO:0000272: polysaccharide catabolic process1.20E-03
42GO:0042744: hydrogen peroxide catabolic process1.40E-03
43GO:0009737: response to abscisic acid1.43E-03
44GO:0000162: tryptophan biosynthetic process1.79E-03
45GO:0080147: root hair cell development1.92E-03
46GO:0009617: response to bacterium2.01E-03
47GO:0048511: rhythmic process2.19E-03
48GO:0003333: amino acid transmembrane transport2.19E-03
49GO:0010089: xylem development2.61E-03
50GO:0042742: defense response to bacterium2.84E-03
51GO:0006979: response to oxidative stress2.87E-03
52GO:0009851: auxin biosynthetic process3.36E-03
53GO:0009630: gravitropism3.68E-03
54GO:0051607: defense response to virus4.34E-03
55GO:0009751: response to salicylic acid4.64E-03
56GO:0010029: regulation of seed germination4.69E-03
57GO:0030244: cellulose biosynthetic process5.42E-03
58GO:0009832: plant-type cell wall biogenesis5.60E-03
59GO:0009664: plant-type cell wall organization8.91E-03
60GO:0042538: hyperosmotic salinity response8.91E-03
61GO:0009620: response to fungus1.13E-02
62GO:0042545: cell wall modification1.17E-02
63GO:0006413: translational initiation1.68E-02
64GO:0040008: regulation of growth1.71E-02
65GO:0045490: pectin catabolic process1.77E-02
66GO:0010150: leaf senescence1.77E-02
67GO:0009409: response to cold2.29E-02
68GO:0006412: translation2.30E-02
69GO:0042254: ribosome biogenesis2.44E-02
70GO:0006970: response to osmotic stress2.54E-02
71GO:0046686: response to cadmium ion2.64E-02
72GO:0016042: lipid catabolic process3.63E-02
73GO:0006357: regulation of transcription from RNA polymerase II promoter4.53E-02
74GO:0009734: auxin-activated signaling pathway4.73E-02
RankGO TermAdjusted P value
1GO:0080013: (E,E)-geranyllinalool synthase activity0.00E+00
2GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H3.12E-05
3GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.12E-05
4GO:0033984: indole-3-glycerol-phosphate lyase activity3.12E-05
5GO:0052691: UDP-arabinopyranose mutase activity7.88E-05
6GO:0019172: glyoxalase III activity7.88E-05
7GO:0042937: tripeptide transporter activity7.88E-05
8GO:0004834: tryptophan synthase activity2.76E-04
9GO:0042936: dipeptide transporter activity2.76E-04
10GO:0016866: intramolecular transferase activity2.76E-04
11GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides5.20E-04
12GO:0004656: procollagen-proline 4-dioxygenase activity5.20E-04
13GO:0043022: ribosome binding6.99E-04
14GO:0008289: lipid binding8.71E-04
15GO:0004568: chitinase activity1.10E-03
16GO:0015198: oligopeptide transporter activity1.31E-03
17GO:0008061: chitin binding1.67E-03
18GO:0010333: terpene synthase activity2.19E-03
19GO:0016760: cellulose synthase (UDP-forming) activity2.46E-03
20GO:0004601: peroxidase activity2.59E-03
21GO:0005199: structural constituent of cell wall3.05E-03
22GO:0030145: manganese ion binding5.99E-03
23GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors6.38E-03
24GO:0003746: translation elongation factor activity6.38E-03
25GO:0003735: structural constituent of ribosome6.77E-03
26GO:0015293: symporter activity8.24E-03
27GO:0015171: amino acid transmembrane transporter activity1.01E-02
28GO:0045330: aspartyl esterase activity1.01E-02
29GO:0045735: nutrient reservoir activity1.05E-02
30GO:0030599: pectinesterase activity1.15E-02
31GO:0022857: transmembrane transporter activity1.15E-02
32GO:0046910: pectinesterase inhibitor activity1.68E-02
33GO:0005215: transporter activity1.87E-02
34GO:0003743: translation initiation factor activity1.97E-02
35GO:0000287: magnesium ion binding2.38E-02
36GO:0016788: hydrolase activity, acting on ester bonds2.44E-02
37GO:0020037: heme binding2.67E-02
38GO:0052689: carboxylic ester hydrolase activity3.02E-02
39GO:0004871: signal transducer activity3.30E-02
40GO:0046872: metal ion binding3.67E-02
41GO:0009055: electron carrier activity3.90E-02
RankGO TermAdjusted P value
1GO:0000138: Golgi trans cisterna3.12E-05
2GO:0035267: NuA4 histone acetyltransferase complex7.88E-05
3GO:0009530: primary cell wall1.37E-04
4GO:0005618: cell wall1.47E-04
5GO:0005576: extracellular region3.03E-04
6GO:0005795: Golgi stack1.67E-03
7GO:0009506: plasmodesma1.76E-03
8GO:0005741: mitochondrial outer membrane2.19E-03
9GO:0046658: anchored component of plasma membrane2.22E-03
10GO:0048046: apoplast3.21E-03
11GO:0031965: nuclear membrane3.36E-03
12GO:0022625: cytosolic large ribosomal subunit3.36E-03
13GO:0009505: plant-type cell wall3.77E-03
14GO:0071944: cell periphery3.84E-03
15GO:0009707: chloroplast outer membrane5.42E-03
16GO:0005840: ribosome1.77E-02
17GO:0022627: cytosolic small ribosomal subunit2.16E-02
18GO:0005829: cytosol3.17E-02
19GO:0005886: plasma membrane3.20E-02
20GO:0005794: Golgi apparatus3.52E-02
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Gene type



Gene DE type